Omicron spike variant BA.1 with Bn03
Resolution: 3.81 Å
EM Method: Single-particle
Fitted PDBs: 8i4h
Q-score: 0.201
Hao A, Song W, Li C, Zhang X, Tu C, Wang X, Wang P, Wu Y, Ying T, Sun L
Signal Transduct Target Ther (2023) 8 pp. 269-269 [ DOI: doi:10.1038/s41392-023-01534-0 Pubmed: 37422451 ]
- Omicron ba.1 spike with bn03 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Bn03 (27 kDa, Protein from Homo sapiens)
- Ba.1 (Complex from Homo sapiens)
- Bn03 (Complex)
Omicron spike variant XBB with Bn03
Resolution: 3.98 Å
EM Method: Single-particle
Fitted PDBs: 8i4e
Q-score: 0.181
Hao A, Song W, Li C, Zhang X, Tu C, Wang X, Wang P, Wu Y, Ying T, Sun L
Signal Transduct Target Ther (2023) 8 pp. 269-269 [ DOI: doi:10.1038/s41392-023-01534-0 Pubmed: 37422451 ]
- Xbb (Complex from Homo sapiens)
- Bn03 (Complex)
- Spike glycoprotein (143 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Bn03 (27 kDa, Protein from Homo sapiens)
- Omicron spike with 6m6 (Complex from Severe acute respiratory syndrome coronavirus 2)
Omicron spike variant XBB with n3130v-Fc
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8i4f
Q-score: 0.302
Hao A, Song W, Li C, Zhang X, Tu C, Wang X, Wang P, Wu Y, Ying T, Sun L
Signal Transduct Target Ther (2023) 8 pp. 269-269 [ DOI: doi:10.1038/s41392-023-01534-0 Pubmed: 37422451 ]
- Xbb (Complex from Homo sapiens)
- Bn03 (Complex)
- Spike glycoprotein (143 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Omicron spike with 6m6 (Complex from Severe acute respiratory syndrome coronavirus 2)
- N3130v-fc (42 kDa, Protein from Homo sapiens)
Omicron spike variant BQ.1.1 with n3130v-Fc
Resolution: 3.68 Å
EM Method: Single-particle
Fitted PDBs: 8i4g
Q-score: 0.266
Hao A, Song W, Li C, Zhang X, Tu C, Wang X, Wang P, Wu Y, Ying T, Sun L
Signal Transduct Target Ther (2023) 8 pp. 269-269 [ DOI: doi:10.1038/s41392-023-01534-0 Pubmed: 37422451 ]
- N3130v-fc (Complex)
- Bq.1.1 (Complex from Homo sapiens)
- Spike glycoprotein (143 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Omicron spike with 6m6 (Complex from Severe acute respiratory syndrome coronavirus 2)
- N3130v-fc (42 kDa, Protein from Homo sapiens)
SARS-CoV-2 Omicron Spike trimer
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7wz1
Q-score: 0.343
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 dimer trimer )
Resolution: 4.47 Å
EM Method: Single-particle
Fitted PDBs: 7wo4
Q-score: 0.376
Zhan W, Tian X, Zhang X, Xing S, Song W, Liu Q, Hao A, Hu Y, Zhang M, Ying T, Chen Z, Lan F, Sun L
J Virol (2022) 96 pp. e0048022-e0048022 [ DOI: doi:10.1128/jvi.00480-22 Pubmed: 35924918 ]
- Spike with mab15 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mab15 vl (23 kDa, Protein from Homo sapiens)
- Mab15 vh (24 kDa, Protein from Homo sapiens)
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 trimer)
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 7wo5
Q-score: 0.395
Zhan W, Tian X, Zhang X, Xing S, Song W, Liu Q, Hao A, Hu Y, Zhang M, Ying T, Chen Z, Lan F, Sun L
J Virol (2022) 96 pp. e0048022-e0048022 [ DOI: doi:10.1128/jvi.00480-22 Pubmed: 35924918 ]
- Spike with mab15 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mab15 vl (23 kDa, Protein from Homo sapiens)
- Mab15 vh (24 kDa, Protein from Homo sapiens)
Locally refined region of SARS-CoV-2 Spike in complex with IgG 553-15
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7wo7
Q-score: 0.366
Zhan W, Tian X, Zhang X, Xing S, Song W, Liu Q, Hao A, Hu Y, Zhang M, Ying T, Chen Z, Lan F, Sun L
J Virol (2022) 96 pp. e0048022-e0048022 [ DOI: doi:10.1128/jvi.00480-22 Pubmed: 35924918 ]
- Spike with mab15 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mab15 vl (23 kDa, Protein from Homo sapiens)
- Mab15 vh (24 kDa, Protein from Homo sapiens)
SARS-CoV-2 Spike in complex with IgG 553-60 (1-up trimer)
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 7woa
Q-score: 0.422
Zhan W, Tian X, Zhang X, Xing S, Song W, Liu Q, Hao A, Hu Y, Zhang M, Ying T, Chen Z, Lan F, Sun L
J Virol (2022) 96 pp. e0048022-e0048022 [ DOI: doi:10.1128/jvi.00480-22 Pubmed: 35924918 ]
- Spike with mab15 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Mab60 vh (24 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mab60 vl (23 kDa, Protein from Homo sapiens)
SARS-CoV-2 Spike in complex with IgG 553-60 (2-up trimer)
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 7wob
Q-score: 0.417
Zhan W, Tian X, Zhang X, Xing S, Song W, Liu Q, Hao A, Hu Y, Zhang M, Ying T, Chen Z, Lan F, Sun L
J Virol (2022) 96 pp. e0048022-e0048022 [ DOI: doi:10.1128/jvi.00480-22 Pubmed: 35924918 ]
- Spike with mab15 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Mab60 vh (24 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mab60 vl (23 kDa, Protein from Homo sapiens)