Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7y04
Q-score: 0.49
Wen Z, Zhang Y, Zhang B, Hang Y, Xu L, Chen Y, Xie Q, Zhao Q, Zhang L, Li G, Zhao B, Sun F, Zhai Y, Zhu Y
Structure (2023) 31 pp. 295- [ Pubmed: 36649707 DOI: doi:10.1016/j.str.2022.12.013 ]
- Aryl hydrocarbon receptor (46 kDa, Protein from Mus musculus)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Hsp90-ahr-p23 complex (Complex from Mus musculus)
- Prostaglandin e synthase 3 (Complex from Mus musculus)
- Prostaglandin e synthase 3 (20 kDa, Protein from Mus musculus)
- Heat shock protein hsp 90-beta (Complex from Mus musculus)
- Beryllium trifluoride ion (66 Da, Ligand)
- Heat shock protein hsp 90-beta (86 kDa, Protein from Mus musculus)
- Aryl hydrocarbon receptor (Complex)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8h77
Q-score: 0.45
Wen Z, Zhang Y, Zhang B, Hang Y, Xu L, Chen Y, Xie Q, Zhao Q, Zhang L, Li G, Zhao B, Sun F, Zhai Y, Zhu Y
Structure (2023) 31 pp. 295- [ Pubmed: 36649707 DOI: doi:10.1016/j.str.2022.12.013 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Ah receptor-interacting protein (Complex from Mus musculus)
- Prostaglandin e synthase 3 (Complex from Mus musculus)
- Ah receptor-interacting protein (38 kDa, Protein from Mus musculus)
- Prostaglandin e synthase 3 (20 kDa, Protein from Mus musculus)
- Heat shock protein hsp 90-beta (Complex from Mus musculus)
- Aryl hydrocarbon receptor (Complex from Mus musculus)
- Mouse hsp90-ahr-p23-xap2 complex (Complex)
- Beryllium trifluoride ion (66 Da, Ligand)
- Aryl hydrocarbon receptor (50 kDa, Protein from Mus musculus)
- Heat shock protein hsp 90-beta (86 kDa, Protein from Mus musculus)
Human L-TGF-beta1 in complex with the anchor protein LRRC33
Resolution: 4.01 Å
EM Method: Single-particle
Fitted PDBs: 7y1r
Q-score: 0.187
Duan Z, Lin X, Wang L, Zhen Q, Jiang Y, Chen C, Yang J, Lee CH, Qin Y, Li Y, Zhao B, Wang J, Zhang Z
Nat Commun (2022) 13 pp. 4988-4988 [ Pubmed: 36008481 DOI: doi:10.1038/s41467-022-32655-9 ]
- Transforming growth factor beta activator lrrc33 (72 kDa, Protein from Homo sapiens)
- L-tgf-beta1 in complex with its anchor protein lrrc33 (150 kDa, Complex from Homo sapiens)
- Transforming growth factor beta-1 proprotein (43 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Complex of integrin alphaV/beta8 and L-TGF-beta1 at a ratio of 1:2
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 7y1t
Q-score: 0.428
Duan Z, Lin X, Wang L, Zhen Q, Jiang Y, Chen C, Yang J, Lee CH, Qin Y, Li Y, Zhao B, Wang J, Zhang Z
Nat Commun (2022) 13 pp. 4988-4988 [ Pubmed: 36008481 DOI: doi:10.1038/s41467-022-32655-9 ]
- Transforming growth factor beta-1 proprotein (43 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Integrin alpha-v (69 kDa, Protein from Homo sapiens)
- Complex of integrin alphav/beta8 and l-tgf-beta1 at a ratio of 1:2 (210 kDa, Complex from Homo sapiens)
- Manganese (ii) ion (54 Da, Ligand)
- Integrin beta-8 (53 kDa, Protein from Homo sapiens)
The mouse cGAS catalytic domain binding to human assembled nucleosome
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 6x59
Q-score: 0.54
Zhao B, Xu P, Rowlett CM, Jing T, Shinde O, Lei Y, West AP, Liu WR, Li P
Nature (2020) 587 pp. 673-677 [ Pubmed: 32911481 DOI: doi:10.1038/s41586-020-2749-z ]
- Histone h2a type 1 (13 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Cyclic gmp-amp synthase (43 kDa, Protein from Mus musculus)
- Cgas-nucleosome complex (Complex from Homo sapiens)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- Histone h3.2 (15 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Dna (45 kDa, DNA from Homo sapiens)
- Dna (45 kDa, DNA from Homo sapiens)
The mouse cGAS catalytic domain binding to human nucleosome that purified from HEK293T cells
Resolution: 4.36 Å
EM Method: Single-particle
Fitted PDBs: 6x5a
Q-score: 0.265
Zhao B, Xu P, Rowlett CM, Jing T, Shinde O, Lei Y, West AP, Liu WR, Li P
Nature (2020) 587 pp. 673-677 [ Pubmed: 32911481 DOI: doi:10.1038/s41586-020-2749-z ]
- Histone h2a type 1 (13 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Cyclic gmp-amp synthase (43 kDa, Protein from Mus musculus)
- Cgas-nucleosome complex (Complex from Homo sapiens)
- Dna (natural) (45 kDa, DNA from Homo sapiens)
- Histone h3.2 (15 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- Dna (natural) (45 kDa, DNA from Homo sapiens)
Two mouse cGAS catalytic domain binding to human assembled nucleosome
Resolution: 6.8 Å
EM Method: Single-particle
Fitted PDBs: 6xjd
Q-score: 0.196
Zhao B, Xu P, Rowlett CM, Jing T, Shinde O, Lei Y, West AP, Liu WR, Li P
Nature (2020) 587 pp. 673-677 [ Pubmed: 32911481 DOI: doi:10.1038/s41586-020-2749-z ]
- Histone h2a type 1 (13 kDa, Protein from Homo sapiens)
- Dna (145-mer) (45 kDa, DNA from Homo sapiens)
- Dna (145-mer) (45 kDa, DNA from Homo sapiens)
- Cyclic gmp-amp synthase (43 kDa, Protein from Mus musculus)
- Zinc ion (65 Da, Ligand)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- Cyclic gmp-amp synthase (Complex from Mus musculus)
- Histone h3.2 (15 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Dna (Complex from Homo sapiens)
- Cgas-nucleosome complex (Complex)
- Histone (Complex from Homo sapiens)