Structure of CUL3-RBX1-KLHL22 complex without CUL3 NA motif
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 8k9i
Q-score: 0.128
Wang W, Liang L, Dai Z, Zuo P, Yu S, Lu Y, Ding D, Chen H, Shan H, Jin Y, Mao Y, Yin Y
Nat Commun (2024) 15 pp. 3789-3789 [ Pubmed: 38710693 DOI: doi:10.1038/s41467-024-48045-2 ]
- E3 ubiquitin-protein ligase rbx1, n-terminally processed (12 kDa, Protein from Homo sapiens)
- Cul3-rbx1-klhl22 complex without cul3 na motif (Complex from Homo sapiens)
- Cullin-3 (87 kDa, Protein from Homo sapiens)
- Kelch-like protein 22 (20 kDa, Protein from Homo sapiens)
Structure of CUL3-RBX1-KLHL22 complex
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8k8t
Q-score: 0.311
Wang W, Liang L, Dai Z, Zuo P, Yu S, Lu Y, Ding D, Chen H, Shan H, Jin Y, Mao Y, Yin Y
Nat Commun (2024) 15 pp. 3789-3789 [ Pubmed: 38710693 DOI: doi:10.1038/s41467-024-48045-2 ]
- Kelch-like protein 22 (74 kDa, Protein from Homo sapiens)
- Cul3-rbx1-klhl22 complex without cul3 na motif (Complex from Homo sapiens)
- Cullin-3 (90 kDa, Protein from Homo sapiens)
Protomer 1 and 2 of the asymmetry trimer of the Cul2-Rbx1-EloBC-FEM1B ubiquitin ligase complex
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 8ij1
Q-score: 0.263
Dai Z, Liang L, Wang W, Zuo P, Yu S, Liu Y, Zhao X, Lu Y, Jin Y, Zhang F, Ding D, Deng W, Yin Y
EMBO J (2024) 43 pp. 1089-1109 [ Pubmed: 38360992 DOI: doi:10.1038/s44318-024-00047-y ]
- Zinc ion (65 Da, Ligand)
- Unneddylated cul2-rbx1-elobc-fem1b ubiquitin ligase complex (Complex from Homo sapiens)
- Elongin-b (11 kDa, Protein from Homo sapiens)
- E3 ubiquitin-protein ligase rbx1 (12 kDa, Protein from Homo sapiens)
- Elongin-c (11 kDa, Protein from Homo sapiens)
- Protein fem-1 homolog b (70 kDa, Protein from Homo sapiens)
- Cullin-2 (87 kDa, Protein from Homo sapiens)
An asymmetry dimer of the Cul2-Rbx1-EloBC-FEM1B ubiquitin ligase complexed with BEX2
Resolution: 3.95 Å
EM Method: Single-particle
Fitted PDBs: 8je1
Q-score: 0.304
Dai Z, Liang L, Wang W, Zuo P, Yu S, Liu Y, Zhao X, Lu Y, Jin Y, Zhang F, Ding D, Deng W, Yin Y
EMBO J (2024) 43 pp. 1089-1109 [ Pubmed: 38360992 DOI: doi:10.1038/s44318-024-00047-y ]
- Zinc ion (65 Da, Ligand)
- Elongin-b (11 kDa, Protein from Homo sapiens)
- Elongin-c (11 kDa, Protein from Homo sapiens)
- Neddylated cul2-rbx1-elobc-fem1b ubiquitin ligase complexed with bex2 (Complex from Homo sapiens)
- E3 ubiquitin-protein ligase rbx1 (12 kDa, Protein from Homo sapiens)
- Protein fem-1 homolog b (70 kDa, Protein from Homo sapiens)
- Cullin-2 (87 kDa, Protein from Homo sapiens)
Cryo-EM structure of neddylated Cul2-Rbx1-EloBC-FEM1B complexed with FNIP1-FLCN
Resolution: 3.63 Å
EM Method: Single-particle
Fitted PDBs: 8je2
Q-score: 0.291
Dai Z, Liang L, Wang W, Zuo P, Yu S, Liu Y, Zhao X, Lu Y, Jin Y, Zhang F, Ding D, Deng W, Yin Y
EMBO J (2024) 43 pp. 1089-1109 [ Pubmed: 38360992 DOI: doi:10.1038/s44318-024-00047-y ]
- Zinc ion (65 Da, Ligand)
- Elongin-b (11 kDa, Protein from Homo sapiens)
- Elongin-c (11 kDa, Protein from Homo sapiens)
- Protein fem-1 homolog b (70 kDa, Protein from Homo sapiens)
- Neddylated cul2-rbx1-elobc-fem1b complexed with fnip1-flcn (Complex from Homo sapiens)
- Folliculin-interacting protein 1 (131 kDa, Protein from Homo sapiens)
- Cullin-2 (87 kDa, Protein from Homo sapiens)
Cryo-EM structure of human BTR1 in the outward-facing state.
Resolution: 2.94 Å
EM Method: Single-particle
Fitted PDBs: 7x1i
Q-score: 0.578
Lu Y, Zuo P, Chen H, Shan H, Wang W, Dai Z, Xu H, Chen Y, Liang L, Ding D, Jin Y, Yin Y
Nat Commun (2023) 14 pp. 6157-6157 [ Pubmed: 37788993 DOI: doi:10.1038/s41467-023-41924-0 ]
- Isoform 1 of solute carrier family 4 member 11 (99 kDa, Protein from Homo sapiens)
- [(2r)-1-octadecanoyloxy-3-[oxidanyl-[(1r,2r,3s,4r,5r,6s)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phospho ryl]oxy-propan-2-yl] (8z)-icosa-5,8,11,14-tetraenoate (1 kDa, Ligand)
- Solute carrier family 4 member 11, isoform b (199 kDa, Complex from Homo sapiens)
Cryo-EM structure of human BTR1 in the outward-facing state in the presence of NH4Cl.
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 7x1j
Q-score: 0.572
Lu Y, Zuo P, Chen H, Shan H, Wang W, Dai Z, Xu H, Chen Y, Liang L, Ding D, Jin Y, Yin Y
Nat Commun (2023) 14 pp. 6157-6157 [ Pubmed: 37788993 DOI: doi:10.1038/s41467-023-41924-0 ]
- Isoform 1 of solute carrier family 4 member 11 (99 kDa, Protein from Homo sapiens)
- [(2r)-1-octadecanoyloxy-3-[oxidanyl-[(1r,2r,3s,4r,5r,6s)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phospho ryl]oxy-propan-2-yl] (8z)-icosa-5,8,11,14-tetraenoate (1 kDa, Ligand)
- Solute carrier family 4 member 11, isoform b (199 kDa, Complex from Homo sapiens)