Deinococcus radidurans HPI S-layer
Resolution: 2.52 Å
EM Method: Single-particle
Fitted PDBs: 8cka
Q-score: 0.582
von Kugelgen A, van Dorst S, Yamashita K, Sexton DL, Tocheva EI, Murshudov G, Alva V, Bharat TAM
PNAS (2023) 120 pp. e2215808120-e2215808120 [ DOI: doi:10.1073/pnas.2215808120 Pubmed: 37043530 ]
- Structure of hexagonally packed intermediate-layer (hpi) protein (Cellular component from Deinococcus radiodurans)
- Hexagonally packed intermediate-layer surface protein (99 kDa, Protein from Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422))
Cryo-EM structure of the CupE pilus from Pseudomonas aeruginosa
Resolution: 3.5 Å
EM Method: Helical reconstruction
Fitted PDBs: 8cio
Q-score: 0.492
Bohning J, Dobbelstein AW, Sulkowski N, Eilers K, von Kugelgen A, Tarafder AK, Peak-Chew SY, Skehel M, Alva V, Filloux A, Bharat TAM
PLoS Pathog (2023) 19 pp. e1011177-e1011177 [ Pubmed: 37058467 DOI: doi:10.1371/journal.ppat.1011177 ]
- Scpu domain-containing protein (16 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Cupe pilus (Complex from Pseudomonas aeruginosa)
In situ structure of the Caulobacter crescentus S-layer
Resolution: 3.5 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8bqe
Q-score: 0.505
Zivanov J, Oton J, Ke Z, von Kugelgen A, Pyle E, Qu K, Morado D, Castano-Diez D, Zanetti G, Bharat TAM, Briggs JAG, Scheres SHW
eLife (2022) 11 [ DOI: doi:10.7554/eLife.83724 Pubmed: 36468689 ]
- S-layer protein rsaa (98 kDa, Protein from Caulobacter vibrioides NA1000)
- Caulobacter crescentus s-layer (Cellular component from Caulobacter vibrioides NA1000)
- Calcium ion (40 Da, Ligand)
Structure of trimeric SlpA outer membrane protein
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 8ae1
Q-score: 0.568
von Kugelgen A, van Dorst S, Alva V, Bharat TAM
PNAS (2022) 119 pp. e2203156119-e2203156119 [ Pubmed: 35943982 DOI: doi:10.1073/pnas.2203156119 ]
- S-layer protein slpa (123 kDa, Protein from Deinococcus radiodurans)
- Calcium ion (40 Da, Ligand)
- Structure of trimeric slpa protein (Complex from Deinococcus radiodurans)
In-situ structure of pentameric S-layer protein
Resolution: 11.58 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7ptp
Q-score: 0.102
von Kugelgen A, Alva V, Bharat TAM
Cell Rep (2021) 37 pp. 110052-110052 [ Pubmed: 34818541 DOI: doi:10.1016/j.celrep.2021.110052 ]
Structure of hexameric S-layer protein from Haloferax volcanii archaea
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 7ptr
Q-score: 0.413
von Kugelgen A, Alva V, Bharat TAM
Cell Rep (2021) 37 pp. 110052-110052 [ Pubmed: 34818541 DOI: doi:10.1016/j.celrep.2021.110052 ]
- Cell surface glycoprotein (81 kDa, Protein from Haloferax volcanii DS2)
- Calcium ion (40 Da, Ligand)
- Beta-d-glucopyranose (180 Da, Ligand)
- Structure of hexameric s-layer protein csg (Complex from Haloferax volcanii DS2)
In-situ structure of hexameric S-layer protein
Resolution: 7.968 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7ptt
Q-score: 0.139
von Kugelgen A, Alva V, Bharat TAM
Cell Rep (2021) 37 pp. 110052-110052 [ Pubmed: 34818541 DOI: doi:10.1016/j.celrep.2021.110052 ]
Structure of pentameric S-layer protein from Halofaerax volcanii
Resolution: 3.87 Å
EM Method: Single-particle
Fitted PDBs: 7ptu
Q-score: 0.341
von Kugelgen A, Alva V, Bharat TAM
Cell Rep (2021) 37 pp. 110052-110052 [ Pubmed: 34818541 DOI: doi:10.1016/j.celrep.2021.110052 ]
- Cell surface glycoprotein (81 kDa, Protein from Haloferax volcanii DS2)
- Structure of pentameric s-layer protein csg (Complex from Haloferax volcanii DS2)
- Beta-d-glucopyranose (180 Da, Ligand)
In-vitro structure of inverted S-layer tube
von Kugelgen A, Alva V, Bharat TAM
Cell Rep (2021) 37 pp. 110052-110052 [ Pubmed: 34818541 DOI: doi:10.1016/j.celrep.2021.110052 ]
Resolution: 4.37 Å
EM Method: Single-particle
Fitted PDBs: 7peo
Q-score: 0.298
Herdman M, von Kugelgen A, Kureisaite-Ciziene D, Duman R, El Omari K, Garman EF, Kjaer A, Kolokouris D, Lowe J, Wagner A, Stansfeld PJ, Bharat TAM
Structure (2022) 30 pp. 215- [ DOI: doi:10.1016/j.str.2021.10.012 Pubmed: 34800371 ]
- S-layer protein (25 kDa, Protein from Caulobacter vibrioides)
- Calcium ion (40 Da, Ligand)
- Holmium atom (164 Da, Ligand)
- Structure of the caulobacter crescentus s-layer protein rsaa n-terminal domain bound to lps and soaked with holmium (Complex from Caulobacter vibrioides)