EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"15F1 Fab light chain" AND author_name:"T"

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Showing 1 - 6 of 6. Page 1 of 1

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EMDB [6]

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EMD-23285

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native AMPA receptor

Release date: Aug. 10, 2022
Resolution: 4.1 Å
EM Method: Single-particle

Yu J, Rao P, Clark S, Mitra J, Ha T, Gouaux E

Nature (2021) 594 pp. 448-453 [ DOI: doi:10.1038/s41586-021-03540-0 Pubmed: 33981040 ]

Sample:

Water (18 Da, Ligand)
15f1 fab (Complex from Mus musculus)
Voltage-dependent calcium channel gamma-8 subunit (43 kDa, Protein from Mouse)
Glutamate receptor 1 (101 kDa, Protein from Mouse)
Protein cornichon homolog 2 (18 kDa, Protein from Mouse)
{[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2h)-yl]methyl}phosphonic acid (409 Da, Ligand)
15f1 fab heavy chain (27 kDa, Protein from Mus musculus)
Glua1/a2/a3-asymmetric-conformation1 (Complex from Mus musculus)
6-[2-chloro-6-(trifluoromethoxy)phenyl]-1h-benzimidazol-2-ol (328 Da, Ligand)
Glutamate receptor (98 kDa, Protein from Mouse)
15f1 fab light chain (25 kDa, Protein from Mus musculus)
Other antibody fragments (Complex from Mus musculus)
Beta-d-mannopyranose (180 Da, Ligand)
11b8 scfv (27 kDa, Protein from Mus musculus)
Glua1/a2/a3-asymmetric-conformation1 recognized by antibody fragments (Complex)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Glutamate receptor 3 (100 kDa, Protein from Mouse)
5b2 fab (19 kDa, Protein from Mus musculus)

[Show more]

EMD-23286

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native AMPA receptor

Release date: Aug. 10, 2022
Resolution: 3.9 Å
EM Method: Single-particle

Yu J, Rao P, Clark S, Mitra J, Ha T, Gouaux E

Nature (2021) 594 pp. 448-453 [ DOI: doi:10.1038/s41586-021-03540-0 Pubmed: 33981040 ]

Sample:

Glua1/a2/a3-asymmetric-conformation2 (Complex from Mus musculus)
5b2 fab (Complex from Mus musculus)
Water (18 Da, Ligand)
15f1 fab (Complex from Mus musculus)
Voltage-dependent calcium channel gamma-8 subunit (43 kDa, Protein from Mouse)
Glutamate receptor 1 (101 kDa, Protein from Mouse)
11b8 scfv (Complex from Mus musculus)
Protein cornichon homolog 2 (18 kDa, Protein from Mouse)
{[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2h)-yl]methyl}phosphonic acid (409 Da, Ligand)
Glutamate receptor 3 (100 kDa, Protein from Mouse)
15f1 fab heavy chain (27 kDa, Protein from Mus musculus)
Glutamate receptor (98 kDa, Protein from Mouse)
15f1 fab light chain (25 kDa, Protein from Mus musculus)
11b8 scfv (27 kDa, Protein from Mus musculus)
6-[2-chloro-6-(trifluoromethoxy)phenyl]-1h-benzimidazol-2-ol (328 Da, Ligand)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Glua1/a2/a3-asymmetric-conformation2 bound to ab fragments (Complex)
5b2 fab (19 kDa, Protein from Mus musculus)

[Show more]

EMD-23287

Download Map 3D View

native AMPA receptor

Release date: Aug. 10, 2022
Resolution: 3.9 Å
EM Method: Single-particle

Yu J, Rao P, Clark S, Mitra J, Ha T, Gouaux E

Nature (2021) 594 pp. 448-453 [ DOI: doi:10.1038/s41586-021-03540-0 Pubmed: 33981040 ]

Sample:

5b2 fab (Complex from Mus musculus)
5b2 fab light chain (18 kDa, Protein from Mus musculus)
15f1 fab (Complex from Mus musculus)
Voltage-dependent calcium channel gamma-8 subunit (43 kDa, Protein from Mouse)
5b2 fab heavy chain (21 kDa, Protein from Mus musculus)
Protein cornichon homolog 2 (18 kDa, Protein from Mouse)
Glua2/a3-symmetric-conformation (Complex from Mus musculus)
15f1 fab heavy chain (27 kDa, Protein from Mus musculus)
Glutamate receptor (98 kDa, Protein from Mouse)
15f1 fab light chain (25 kDa, Protein from Mus musculus)
Glua2/a3-symmetric-conformation bound to fabs (Complex)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Glutamate receptor 3 (100 kDa, Protein from Mouse)

[Show more]

EMD-23288

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native AMPA receptor

Release date: Aug. 10, 2022
Resolution: 6.5 Å
EM Method: Single-particle

Yu J, Rao P, Clark S, Mitra J, Ha T, Gouaux E

Nature (2021) 594 pp. 448-453 [ DOI: doi:10.1038/s41586-021-03540-0 Pubmed: 33981040 ]

Sample:

5b2 fab (Complex from Mus musculus)
5b2 fab light chain (18 kDa, Protein from Mus musculus)
15f1 fab (Complex from Mus musculus)
Voltage-dependent calcium channel gamma-8 subunit (43 kDa, Protein from Mouse)
5b2 fab heavy chain (21 kDa, Protein from Mus musculus)
Protein cornichon homolog 2 (18 kDa, Protein from Mouse)
15f1 fab heavy chain (27 kDa, Protein from Mus musculus)
Glua2/a3-asymmetric-conformation1 bound to fabs (Complex)
Glua2/a3-asymmetric-conformation (Complex from Mus musculus)
Glutamate receptor (98 kDa, Protein from Mouse)
15f1 fab light chain (25 kDa, Protein from Mus musculus)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Glutamate receptor 3 (100 kDa, Protein from Mouse)

[Show more]

EMD-23283

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native AMPA receptor

Release date: May 12, 2021
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7ldd
Q-score: 0.25

Yu J, Rao P, Clark S, Mitra J, Ha T, Gouaux E

Nature (2021) 594 pp. 448-453 [ DOI: doi:10.1038/s41586-021-03540-0 Pubmed: 33981040 ]

Sample:

Glutamate receptor (98 kDa, Protein from Mus musculus)
Voltage-dependent calcium channel gamma-8 subunit (43 kDa, Protein from Mus musculus)
6-[2-chloro-6-(trifluoromethoxy)phenyl]-1h-benzimidazol-2-ol (328 Da, Ligand)
Hexadecane (226 Da, Ligand)
15f1 fab (Complex from Mus musculus)
Glua1/a2-symmetric-conformation (Complex from Mus musculus)
Dodecane (170 Da, Ligand)
Protein cornichon homolog 2 (18 kDa, Protein from Mus musculus)
Glua1/a2-symmetric-conformation bound to antibody fragments (Complex)
11b8 scfv (27 kDa, Protein from Mus musculus)
Glutamate receptor 1 (101 kDa, Protein from Mus musculus)
{[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2h)-yl]methyl}phosphonic acid (409 Da, Ligand)
15f1 fab heavy chain (27 kDa, Protein from Mus musculus)
N-octane (114 Da, Ligand)
Heptane (100 Da, Ligand)
Nonane (128 Da, Ligand)
Tetradecane (198 Da, Ligand)
11b8 scfv (Complex from Mus musculus)
Decane (142 Da, Ligand)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
15f1 fab light chain (25 kDa, Protein from Mus musculus)

[Show more]

EMD-23284

Download Map 3D View

native AMPA receptor

Release date: May 12, 2021
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7lde
Q-score: 0.221

Yu J, Rao P, Clark S, Mitra J, Ha T, Gouaux E

Nature (2021) 594 pp. 448-453 [ DOI: doi:10.1038/s41586-021-03540-0 Pubmed: 33981040 ]

Sample:

Glua1/a2-asymmetric-conformation (Complex from Mus musculus)
Glutamate receptor (98 kDa, Protein from Mus musculus)
Voltage-dependent calcium channel gamma-8 subunit (43 kDa, Protein from Mus musculus)
6-[2-chloro-6-(trifluoromethoxy)phenyl]-1h-benzimidazol-2-ol (328 Da, Ligand)
Hexadecane (226 Da, Ligand)
15f1 fab (Complex from Mus musculus)
Dodecane (170 Da, Ligand)
Protein cornichon homolog 2 (18 kDa, Protein from Mus musculus)
11b8 scfv (27 kDa, Protein from Mus musculus)
Glutamate receptor 1 (101 kDa, Protein from Mus musculus)
{[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2h)-yl]methyl}phosphonic acid (409 Da, Ligand)
15f1 fab heavy chain (27 kDa, Protein from Mus musculus)
N-octane (114 Da, Ligand)
Heptane (100 Da, Ligand)
Nonane (128 Da, Ligand)
Tetradecane (198 Da, Ligand)
11b8 scfv (Complex from Mus musculus)
Decane (142 Da, Ligand)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
15f1 fab light chain (25 kDa, Protein from Mus musculus)
Glua1/a2-asymmetric-conformation bound to antibody fragments (Complex)

[Show more]

Sort by: Download

Showing 1 - 6 of 6. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [6]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: