Human RIO1(kd)-StHA late pre-40S particle, structural state A (pre 18S rRNA cleavage)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6zuo
Q-score: 0.433
Plassart L, Shayan R, Montellese C, Rinaldi D, Larburu N, Pichereaux C, Froment C, Lebaron S, O'Donohue MF, Kutay U, Marcoux J, Gleizes PE, Plisson-Chastang C
eLife (2021) 10 [ DOI: doi:10.7554/eLife.61254 Pubmed: 33908345 ]
- 40s ribosomal protein s13 (17 kDa, Protein from Homo sapiens)
- Human cytoplasmic late precursor to the small ribosomal subunit, purified using rio1(kd)-stha as bait. structural state a (pre 18s rrna maturation) (1 MDa, Complex from Homo sapiens)
- Rna-binding protein pno1 (27 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s7 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s10 (18 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s16 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s12 (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s21 (9 kDa, Protein from Homo sapiens)
- Rna-binding protein nob1 (46 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s18 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s27 (9 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s25 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15 (17 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s29 (6 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s5 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s8 (24 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s9 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15a (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s28 (7 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s30 (6 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s11 (18 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s14 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s23 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3a (30 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s17 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3 (26 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s20 (13 kDa, Protein from Homo sapiens)
- Ubiquitin-40s ribosomal protein s27a (18 kDa, Protein from Homo sapiens)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s19 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein sa (32 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s2 (31 kDa, Protein from Homo sapiens)
- Pre-18s ribosomal rna (603 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s6 (28 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s24 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Homo sapiens)
Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6zv6
Q-score: 0.468
Plassart L, Shayan R, Montellese C, Rinaldi D, Larburu N, Pichereaux C, Froment C, Lebaron S, O'Donohue MF, Kutay U, Marcoux J, Gleizes PE, Plisson-Chastang C
eLife (2021) 10 [ DOI: doi:10.7554/eLife.61254 Pubmed: 33908345 ]
- 40s ribosomal protein s28 (7 kDa, Protein from Human)
- 40s ribosomal protein s17 (15 kDa, Protein from Human)
- Serine/threonine-protein kinase rio1 (65 kDa, Protein from Human)
- Water (18 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein sa (32 kDa, Protein from Human)
- 40s ribosomal protein s5 (22 kDa, Protein from Human)
- 40s ribosomal protein s21 (9 kDa, Protein from Human)
- 40s ribosomal protein s19 (16 kDa, Protein from Human)
- 40s ribosomal protein s3 (26 kDa, Protein from Human)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s29 (6 kDa, Protein from Human)
- 40s ribosomal protein s25 (13 kDa, Protein from Human)
- 40s ribosomal protein s10 (18 kDa, Protein from Human)
- 40s ribosomal protein s6 (28 kDa, Protein from Human)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Human)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- 40s ribosomal protein s24 (15 kDa, Protein from Human)
- 40s ribosomal protein s18 (17 kDa, Protein from Human)
- 40s ribosomal protein s20 (13 kDa, Protein from Human)
- 40s ribosomal protein s16 (16 kDa, Protein from Human)
- 40s ribosomal protein s12 (14 kDa, Protein from Human)
- 40s ribosomal protein s23 (15 kDa, Protein from Human)
- Ubiquitin-40s ribosomal protein s27a (18 kDa, Protein from Human)
- 40s ribosomal protein s9 (22 kDa, Protein from Human)
- 40s ribosomal protein s26 (13 kDa, Protein from Human)
- 40s ribosomal protein s8 (24 kDa, Protein from Human)
- 40s ribosomal protein s3a (30 kDa, Protein from Human)
- 40s ribosomal protein s27 (9 kDa, Protein from Human)
- 40s ribosomal protein s15 (17 kDa, Protein from Human)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Human)
- 18s ribosomal rna (602 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s30 (6 kDa, Protein from Human)
- Human cytoplasmic late precursor to the small ribosomal subunit, purified using rio1(kd)-stha as bait. structural state b (post 18s rrna maturation) (1 MDa, Complex from Homo sapiens)
- 40s ribosomal protein s15a (14 kDa, Protein from Human)
- 40s ribosomal protein s7 (22 kDa, Protein from Human)
- 40s ribosomal protein s13 (17 kDa, Protein from Human)
- 40s ribosomal protein s11 (18 kDa, Protein from Human)
- 40s ribosomal protein s14 (16 kDa, Protein from Human)
- 40s ribosomal protein s2 (31 kDa, Protein from Human)
Human pre-40S particle purified using RIO1(kd)-StHA as bait - Structural State B, Body
Plassart L, Shayan R, Montellese C, Rinaldi D, Larburu N, Pichereaux C, Froment C, Lebaron S, O'Donohue MF, Kutay U, Marcoux J, Gleizes PE, Plisson-Chastang C
eLife (2021) 10 [ DOI: doi:10.7554/eLife.61254 Pubmed: 33908345 ]
Human pre-40S particle purified using RIO1(kd)-StHA as bait - Structural State B, Head
Plassart L, Shayan R, Montellese C, Rinaldi D, Larburu N, Pichereaux C, Froment C, Lebaron S, O'Donohue MF, Kutay U, Marcoux J, Gleizes PE, Plisson-Chastang C
eLife (2021) 10 [ DOI: doi:10.7554/eLife.61254 Pubmed: 33908345 ]
Human pre-40S particle purified using RIO1(kd)-StHA as bait - Structural state B, platform
Plassart L, Shayan R, Montellese C, Rinaldi D, Larburu N, Pichereaux C, Froment C, Lebaron S, O'Donohue MF, Kutay U, Marcoux J, Gleizes PE, Plisson-Chastang C
eLife (2021) 10 [ DOI: doi:10.7554/eLife.61254 Pubmed: 33908345 ]
Human pre-40S particle purified using RIO1(kd)-StHA as bait - Structural state A, body
Plassart L, Shayan R, Montellese C, Rinaldi D, Larburu N, Pichereaux C, Froment C, Lebaron S, O'Donohue MF, Kutay U, Marcoux J, Gleizes PE, Plisson-Chastang C
eLife (2021) 10 [ DOI: doi:10.7554/eLife.61254 Pubmed: 33908345 ]
Human pre-40S particle purified using RIO1(kd)-StHA as bait - Structural state A, head
Plassart L, Shayan R, Montellese C, Rinaldi D, Larburu N, Pichereaux C, Froment C, Lebaron S, O'Donohue MF, Kutay U, Marcoux J, Gleizes PE, Plisson-Chastang C
eLife (2021) 10 [ Pubmed: 33908345 DOI: doi:10.7554/eLife.61254 ]
Human pre-40S particle purified using RIO1(kd)-StHA as bait - Structural state A, platform
Plassart L, Shayan R, Montellese C, Rinaldi D, Larburu N, Pichereaux C, Froment C, Lebaron S, O'Donohue MF, Kutay U, Marcoux J, Gleizes PE, Plisson-Chastang C
eLife (2021) 10 [ DOI: doi:10.7554/eLife.61254 Pubmed: 33908345 ]