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sample_name:"23S Ribosomal RNA" AND xref_links:"chebi" AND author_name:"Graf M"
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Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.

Release date: Jan. 25, 2023
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8b7y
Q-score: 0.556

Koller TO, Scheid U, Kosel T, Herrmann J, Krug D, Boshoff HIM, Beckert B, Evans JC, Schlemmer J, Sloan B, Weiner DM, Via LE, Moosa A, Ioerger TR, Graf M, Zinshteyn B, Abdelshahid M, Nguyen F, Arenz S, Gille F, Siebke M, Seedorf T, Plettenburg O, Green R, Warnke AL, Ullrich J, Warrass R, Barry 3rd CE, Warner DF, Mizrahi V, Kirschning A, Wilson DN, Muller R

J Am Chem Soc (2023) 145 pp. 851-863 [ DOI: doi:10.1021/jacs.2c08816 Pubmed: 36603206 ]

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Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.

Release date: Jan. 18, 2023
Resolution: 2.1 Å
EM Method: Single-particle
Fitted PDBs: 7qq3
Q-score: 0.588

Koller TO, Scheid U, Kosel T, Herrmann J, Krug D, Boshoff HIM, Beckert B, Evans JC, Schlemmer J, Sloan B, Weiner DM, Via LE, Moosa A, Ioerger TR, Graf M, Zinshteyn B, Abdelshahid M, Nguyen F, Arenz S, Gille F, Siebke M, Seedorf T, Plettenburg O, Green R, Warnke AL, Ullrich J, Warrass R, Barry 3rd CE, Warner DF, Mizrahi V, Kirschning A, Wilson DN, Muller R

J Am Chem Soc (2023) 145 pp. 851-863 [ DOI: doi:10.1021/jacs.2c08816 Pubmed: 36603206 ]

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Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)

Release date: Aug. 22, 2018
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6gxm
Q-score: 0.319

Graf M, Huter P, Maracci C, Peterek M, Rodnina MV, Wilson DN

Nat Commun (2018) 9 pp. 3053-3053 [ Pubmed: 30076302 DOI: doi:10.1038/s41467-018-05465-1 ]

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Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)

Release date: Aug. 15, 2018
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6gwt
Q-score: 0.33

Graf M, Huter P, Maracci C, Peterek M, Rodnina MV, Wilson DN

Nat Commun (2018) 9 pp. 3053-3053 [ Pubmed: 30076302 DOI: doi:10.1038/s41467-018-05465-1 ]

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Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)

Release date: Aug. 15, 2018
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6gxn
Q-score: 0.307

Graf M, Huter P, Maracci C, Peterek M, Rodnina MV, Wilson DN

Nat Commun (2018) 9 pp. 3053-3053 [ DOI: doi:10.1038/s41467-018-05465-1 Pubmed: 30076302 ]

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Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)

Release date: Aug. 15, 2018
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6gxo
Q-score: 0.308

Graf M, Huter P, Maracci C, Peterek M, Rodnina MV, Wilson DN

Nat Commun (2018) 9 pp. 3053-3053 [ Pubmed: 30076302 DOI: doi:10.1038/s41467-018-05465-1 ]

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Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only)

Release date: Aug. 15, 2018
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 6gxp
Q-score: 0.217

Graf M, Huter P, Maracci C, Peterek M, Rodnina MV, Wilson DN

Nat Commun (2018) 9 pp. 3053-3053 [ DOI: doi:10.1038/s41467-018-05465-1 Pubmed: 30076302 ]

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Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Release date: Nov. 22, 2017
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6enj
Q-score: 0.385

Huter P, Arenz S, Bock LV, Graf M, Frister JO, Heuer A, Peil L, Starosta AL, Wohlgemuth I, Peske F, Novacek J, Berninghausen O, Grubmuller H, Tenson T, Beckmann R, Rodnina MV, Vaiana AC, Wilson DN

Mol Cell (2017) 68 pp. 515-527.e6 [ DOI: doi:10.1016/j.molcel.2017.10.014 Pubmed: 29100052 ]

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Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)

Release date: Nov. 22, 2017
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6enu
Q-score: 0.524

Huter P, Arenz S, Bock LV, Graf M, Frister JO, Heuer A, Peil L, Starosta AL, Wohlgemuth I, Peske F, Novacek J, Berninghausen O, Grubmuller H, Tenson T, Beckmann R, Rodnina MV, Vaiana AC, Wilson DN

Mol Cell (2017) 68 pp. 515-527.e6 [ DOI: doi:10.1016/j.molcel.2017.10.014 Pubmed: 29100052 ]

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Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution

Release date: Aug. 17, 2016
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 5kcr
Q-score: 0.346

Arenz S, Juette MF, Graf M, Nguyen F, Huter P, Polikanov YS, Blanchard SC, Wilson DN

PNAS (2016) 113 pp. 7527-7532 [ DOI: doi:10.1073/pnas.1604790113 Pubmed: 27330110 ]

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