Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 9fhl
Q-score: 0.612
Bourgeois G, Coureux PD, Lazennec-Schurdevin C, Madru C, Gaillard T, Duchateau M, Chamot-Rooke J, Bourcier S, Mechulam Y, Schmitt E
Nat Commun (2025) 16 pp. 348-348 [ DOI: doi:10.1038/s41467-024-55718-5 Pubmed: 39753558 ]
- Small ribosomal subunit protein es19 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us19 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna_map (5 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es17 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us5 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Zinc ion (65 Da, Ligand)
- Small ribosomal subunit protein es25 (12 kDa, Protein from Saccharolobus solfataricus P2)
- High-resolution cryo-em structure of saccharolobus solfataricus 30s ribosomal subunit bound to mrna and initiator trna (Complex from Saccharolobus solfataricus P2)
- Water (18 Da, Ligand)
- Small ribosomal subunit protein us9 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es28 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es31 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Vapb-type antitoxin (8 kDa, Protein from Saccharolobus solfataricus P2)
- Large ribosomal subunit protein el8 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us13 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es6 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es24 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es1 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es27 (7 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us10 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us4 (20 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us11 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us3 (25 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us14 (6 kDa, Protein from Saccharolobus solfataricus P2)
- Lsu ribosomal protein s30e (rps30e) (6 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna_map (4 kDa, RNA from Saccharolobus solfataricus P2)
- Initiator trna met (24 kDa, RNA from Saccharolobus solfataricus P2)
- Small zinc finger protein hvo-2753-like zinc-binding pocket domain-containing protein (7 kDa, Protein from Saccharolobus solfataricus P2)
- Spermine (202 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Small ribosomal subunit protein us7 (22 kDa, Protein from Saccharolobus solfataricus P2)
- As34 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us8 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us2 (26 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us15 (17 kDa, Protein from Saccharolobus solfataricus P2)
- Rrna 16s sso (486 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us17 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es8 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us12 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es4 (27 kDa, Protein from Saccharolobus solfataricus P2)
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 9fra
Q-score: 0.533
Bourgeois G, Coureux PD, Lazennec-Schurdevin C, Madru C, Gaillard T, Duchateau M, Chamot-Rooke J, Bourcier S, Mechulam Y, Schmitt E
Nat Commun (2025) 16 pp. 348-348 [ DOI: doi:10.1038/s41467-024-55718-5 Pubmed: 39753558 ]
- Small ribosomal subunit protein es19 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us5 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us19 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna_map (5 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es17 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Zinc ion (65 Da, Ligand)
- Small ribosomal subunit protein es25 (12 kDa, Protein from Saccharolobus solfataricus P2)
- High-resolution cryo-em structure of saccharolobus solfataricus 30s ribosomal subunit bound to mrna and initiator trna (Complex from Saccharolobus solfataricus P2)
- Water (18 Da, Ligand)
- Small ribosomal subunit protein us9 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Trna initiator met (24 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein es28 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es31 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Vapb-type antitoxin (8 kDa, Protein from Saccharolobus solfataricus P2)
- Large ribosomal subunit protein el8 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us13 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es6 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es24 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es1 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es27 (7 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us10 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us4 (20 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us11 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us3 (25 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us14 (6 kDa, Protein from Saccharolobus solfataricus P2)
- Lsu ribosomal protein s30e (rps30e) (6 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna_map (4 kDa, RNA from Saccharolobus solfataricus P2)
- Small zinc finger protein hvo-2753-like zinc-binding pocket domain-containing protein (7 kDa, Protein from Saccharolobus solfataricus P2)
- Spermine (202 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Rrna 16s (486 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us7 (22 kDa, Protein from Saccharolobus solfataricus P2)
- As34 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us8 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us2 (26 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us15 (17 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us17 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es8 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us12 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es4 (27 kDa, Protein from Saccharolobus solfataricus P2)
Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to SD mRNA
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9frk
Q-score: 0.484
Bourgeois G, Coureux PD, Lazennec-Schurdevin C, Madru C, Gaillard T, Duchateau M, Chamot-Rooke J, Bourcier S, Mechulam Y, Schmitt E
Nat Commun (2025) 16 pp. 348-348 [ DOI: doi:10.1038/s41467-024-55718-5 Pubmed: 39753558 ]
- Small ribosomal subunit protein es19 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us19 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es17 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us5 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Zinc ion (65 Da, Ligand)
- Small ribosomal subunit protein es25 (12 kDa, Protein from Saccharolobus solfataricus P2)
- High-resolution cryo-em structure of saccharolobus solfataricus 30s ribosomal subunit bound to mrna and initiator trna (Complex from Saccharolobus solfataricus P2)
- Water (18 Da, Ligand)
- Small ribosomal subunit protein us9 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es28 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es31 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Vapb-type antitoxin (8 kDa, Protein from Saccharolobus solfataricus P2)
- Large ribosomal subunit protein el8 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us13 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es6 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es24 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es1 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es27 (7 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us10 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us4 (20 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us11 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us3 (25 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us14 (6 kDa, Protein from Saccharolobus solfataricus P2)
- Lsu ribosomal protein s30e (rps30e) (6 kDa, Protein from Saccharolobus solfataricus P2)
- Small zinc finger protein hvo-2753-like zinc-binding pocket domain-containing protein (7 kDa, Protein from Saccharolobus solfataricus P2)
- Spermine (202 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Small ribosomal subunit protein us7 (22 kDa, Protein from Saccharolobus solfataricus P2)
- As34 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us8 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us2 (26 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us15 (17 kDa, Protein from Saccharolobus solfataricus P2)
- Trna met initiator (24 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein us17 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna aef1a (9 kDa, RNA from Saccharolobus solfataricus P2)
- Rrna 16s (486 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es8 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us12 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es4 (27 kDa, Protein from Saccharolobus solfataricus P2)
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 9frl
Q-score: 0.471
Bourgeois G, Coureux PD, Lazennec-Schurdevin C, Madru C, Gaillard T, Duchateau M, Chamot-Rooke J, Bourcier S, Mechulam Y, Schmitt E
Nat Commun (2025) 16 pp. 348-348 [ DOI: doi:10.1038/s41467-024-55718-5 Pubmed: 39753558 ]
- Small ribosomal subunit protein es19 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us19 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es17 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us5 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Zinc ion (65 Da, Ligand)
- Small ribosomal subunit protein es25 (12 kDa, Protein from Saccharolobus solfataricus P2)
- High-resolution cryo-em structure of saccharolobus solfataricus 30s ribosomal subunit bound to mrna and initiator trna (Complex from Saccharolobus solfataricus P2)
- Water (18 Da, Ligand)
- Small ribosomal subunit protein us9 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es28 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es31 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna (9 kDa, RNA from Pyrococcus abyssi)
- Large ribosomal subunit protein el8 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us13 (18 kDa, Protein from Saccharolobus solfataricus P2)
- As33 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es6 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es24 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es1 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es27 (7 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us10 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us4 (20 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us11 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us3 (25 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us14 (6 kDa, Protein from Saccharolobus solfataricus P2)
- Lsu ribosomal protein s30e (rps30e) (6 kDa, Protein from Saccharolobus solfataricus P2)
- Small zinc finger protein hvo-2753-like zinc-binding pocket domain-containing protein (7 kDa, Protein from Saccharolobus solfataricus P2)
- Spermine (202 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Small ribosomal subunit protein us7 (22 kDa, Protein from Saccharolobus solfataricus P2)
- As34 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us8 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us2 (26 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us15 (17 kDa, Protein from Saccharolobus solfataricus P2)
- Trna met initiator (24 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein us17 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Rrna 16s (486 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es8 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us12 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es4 (27 kDa, Protein from Saccharolobus solfataricus P2)
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9fs6
Q-score: 0.502
Bourgeois G, Coureux PD, Lazennec-Schurdevin C, Madru C, Gaillard T, Duchateau M, Chamot-Rooke J, Bourcier S, Mechulam Y, Schmitt E
Nat Commun (2025) 16 pp. 348-348 [ DOI: doi:10.1038/s41467-024-55718-5 Pubmed: 39753558 ]
- Small ribosomal subunit protein es19 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Trna met initiator (24 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein us19 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es17 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us5 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna ss-aif2beta (4 kDa, RNA from Saccharolobus solfataricus P2)
- Zinc ion (65 Da, Ligand)
- Trna met initiator (Complex from Escherichia coli)
- Small ribosomal subunit protein es25 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Saccharolobus solfataricus 30s (Complex from Saccharolobus solfataricus P2)
- Water (18 Da, Ligand)
- Small ribosomal subunit protein us9 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Small ribosomal subunit protein es28 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es31 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Vapb-type antitoxin (8 kDa, Protein from Saccharolobus solfataricus P2)
- Large ribosomal subunit protein el8 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us13 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es6 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es24 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es1 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es27 (7 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us10 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna (Complex from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us4 (20 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us3 (25 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us14 (6 kDa, Protein from Saccharolobus solfataricus P2)
- Lsu ribosomal protein s30e (rps30e) (6 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us11 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small zinc finger protein hvo-2753-like zinc-binding pocket domain-containing protein (7 kDa, Protein from Saccharolobus solfataricus P2)
- Spermine (202 Da, Ligand)
- Cryo-em structure of saccharolobus solfataricus 30s ribosomal subunit with helix 44 in position up bound to mrna and initiator trna (Complex)
- Magnesium ion (24 Da, Ligand)
- Lsu ribosomal protein s26e (rps26e) (10 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us7 (22 kDa, Protein from Saccharolobus solfataricus P2)
- As34 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us8 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us2 (26 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us15 (17 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us17 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Rrna 16s (486 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es8 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us12 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es4 (27 kDa, Protein from Saccharolobus solfataricus P2)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 9fs8
Q-score: 0.391
Bourgeois G, Coureux PD, Lazennec-Schurdevin C, Madru C, Gaillard T, Duchateau M, Chamot-Rooke J, Bourcier S, Mechulam Y, Schmitt E
Nat Commun (2025) 16 pp. 348-348 [ DOI: doi:10.1038/s41467-024-55718-5 Pubmed: 39753558 ]
- Small ribosomal subunit protein es19 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Trna met initiator (24 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein us19 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es17 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us5 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Zinc ion (65 Da, Ligand)
- Trna met initiator (Complex from Escherichia coli)
- Small ribosomal subunit protein es25 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Saccharolobus solfataricus 30s (Complex from Saccharolobus solfataricus P2)
- Water (18 Da, Ligand)
- Small ribosomal subunit protein us9 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es28 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es31 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna ss-aef1a-like (8 kDa, RNA from Saccharolobus solfataricus P2)
- Large ribosomal subunit protein el8 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us13 (18 kDa, Protein from Saccharolobus solfataricus P2)
- As33 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es6 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es24 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es1 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es27 (7 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us10 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna (Complex from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us4 (20 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us11 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us14 (6 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us3 (25 kDa, Protein from Saccharolobus solfataricus P2)
- Lsu ribosomal protein s30e (rps30e) (6 kDa, Protein from Saccharolobus solfataricus P2)
- Small zinc finger protein hvo-2753-like zinc-binding pocket domain-containing protein (7 kDa, Protein from Saccharolobus solfataricus P2)
- Spermine (202 Da, Ligand)
- Cryo-em structure of saccharolobus solfataricus 30s with helix44 inposition down bound to mrna and initiator trna (Complex)
- Magnesium ion (24 Da, Ligand)
- Lsu ribosomal protein s26e (rps26e) (10 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us7 (22 kDa, Protein from Saccharolobus solfataricus P2)
- As34 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us8 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us2 (26 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us15 (17 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us17 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Rrna 16s (486 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es8 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us12 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es4 (27 kDa, Protein from Saccharolobus solfataricus P2)
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 9fsf
Q-score: 0.528
Bourgeois G, Coureux PD, Lazennec-Schurdevin C, Madru C, Gaillard T, Duchateau M, Chamot-Rooke J, Bourcier S, Mechulam Y, Schmitt E
Nat Commun (2025) 16 pp. 348-348 [ DOI: doi:10.1038/s41467-024-55718-5 Pubmed: 39753558 ]
- Saccharolobus solfataricus 30s (Complex from Saccharolobus solfataricus)
- Small ribosomal subunit protein es19 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us19 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es17 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us5 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Zinc ion (65 Da, Ligand)
- Trna met initiator (Complex from Escherichia coli)
- Mrna map (4 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es25 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Water (18 Da, Ligand)
- Small ribosomal subunit protein us9 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Small ribosomal subunit protein es28 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es31 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Vapb-type antitoxin (8 kDa, Protein from Saccharolobus solfataricus P2)
- Large ribosomal subunit protein el8 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna (Complex from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us13 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna map (4 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es6 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es24 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Cryo-em structure of saccharolobus solfataricus 30s with h44 up bound to trna, mrna and initiation factor aif2 (Complex)
- Small ribosomal subunit protein es1 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es27 (7 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us10 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us4 (20 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us11 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us3 (25 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us14 (6 kDa, Protein from Saccharolobus solfataricus P2)
- Lsu ribosomal protein s30e (rps30e) (6 kDa, Protein from Saccharolobus solfataricus P2)
- Small zinc finger protein hvo-2753-like zinc-binding pocket domain-containing protein (7 kDa, Protein from Saccharolobus solfataricus P2)
- Spermine (202 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Small ribosomal subunit protein us7 (22 kDa, Protein from Saccharolobus solfataricus P2)
- As34 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us8 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us2 (26 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us15 (17 kDa, Protein from Saccharolobus solfataricus P2)
- Trna met initiator (24 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein us17 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Rrna 16s (486 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es8 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us12 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es4 (27 kDa, Protein from Saccharolobus solfataricus P2)
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9fy0
Q-score: 0.512
Bourgeois G, Coureux PD, Lazennec-Schurdevin C, Madru C, Gaillard T, Duchateau M, Chamot-Rooke J, Bourcier S, Mechulam Y, Schmitt E
Nat Commun (2025) 16 pp. 348-348 [ DOI: doi:10.1038/s41467-024-55718-5 Pubmed: 39753558 ]
- Small ribosomal subunit protein es19 (18 kDa, Protein from Saccharolobus solfataricus P2)
- Trna met initiator (24 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein us19 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es17 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us5 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Zinc ion (65 Da, Ligand)
- Trna met initiator (Complex from Escherichia coli)
- Small ribosomal subunit protein es25 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Saccharolobus solfataricus 30s (Complex from Saccharolobus solfataricus P2)
- Water (18 Da, Ligand)
- Small ribosomal subunit protein us9 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Small ribosomal subunit protein es28 (9 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es31 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Large ribosomal subunit protein el8 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us13 (18 kDa, Protein from Saccharolobus solfataricus P2)
- As33 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es6 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es24 (13 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es1 (23 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es27 (7 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us10 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Mrna (Complex from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us4 (20 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us11 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us14 (6 kDa, Protein from Saccharolobus solfataricus P2)
- Cryo-em structure of saccharolobus solfataricus 30s initiation complex bound to ss_aif2beta leaderless mrna (Complex)
- Small ribosomal subunit protein us3 (25 kDa, Protein from Saccharolobus solfataricus P2)
- Lsu ribosomal protein s30e (rps30e) (6 kDa, Protein from Saccharolobus solfataricus P2)
- Small zinc finger protein hvo-2753-like zinc-binding pocket domain-containing protein (7 kDa, Protein from Saccharolobus solfataricus P2)
- Spermine (202 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Lsu ribosomal protein s26e (rps26e) (10 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us7 (22 kDa, Protein from Saccharolobus solfataricus P2)
- As34 (8 kDa, Protein from Saccharolobus solfataricus P2)
- Ss_aif2beta mrna (4 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us8 (15 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us2 (26 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us15 (17 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us17 (12 kDa, Protein from Saccharolobus solfataricus P2)
- Rrna 16s (486 kDa, RNA from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es8 (14 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein us12 (16 kDa, Protein from Saccharolobus solfataricus P2)
- Small ribosomal subunit protein es4 (27 kDa, Protein from Saccharolobus solfataricus P2)
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6sw9
Q-score: 0.337
Coureux PD, Lazennec-Schurdevin C, Bourcier S, Mechulam Y, Schmitt E
Commun Biol (2020) 3 pp. 58-58 [ DOI: doi:10.1038/s42003-020-0780-0 Pubmed: 32029867 ]
- 30s ribosomal protein s10 (11 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Ribosome (Complex from Pyrococcus abyssi GE5)
- Trna (Complex from Escherichia coli)
- 30s ribosomal protein s8e (14 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Translation initiation factor 1a (Complex from Pyrococcus abyssi GE5)
- 16s ribosomal rna (487 kDa, RNA from Pyrococcus abyssi GE5)
- Translation initiation factor 2 subunit gamma (45 kDa, Protein from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2))
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s19e (17 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s3 (23 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s4e (28 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s9 (15 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 50s ribosomal protein l7ae (13 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s3ae (22 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s17e (8 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Water (18 Da, Ligand)
- Mrna (Complex from Pyrococcus abyssi GE5)
- Translation initiation factor 2 subunit beta (14 kDa, Protein from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2))
- Zn-ribbon rna-binding protein involved in translation (7 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s13 (16 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s19 (15 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Mrna (6 kDa, RNA from Pyrococcus abyssi GE5)
- Translation initiation factor 2 subunits alpha, beta and gamma (Complex from Saccharolobus solfataricus P2)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- 30s ribosomal protein s8 (14 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s24e (11 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 50s ribosomal protein l41e (4 kDa, Protein from Pyrococcus abyssi GE5)
- Methionine (149 Da, Ligand)
- 30s ribosomal protein s28e (8 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Initiator met-trna fmet from e. coli (a1u72 variant) (24 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s27e (7 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s12 (16 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s15 (18 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s5 (26 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Translation initiation factor 2 subunit alpha (28 kDa, Protein from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2))
- Magnesium ion (24 Da, Ligand)
- 30s ribosomal protein s6e (14 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Archaeal translation initiation complex devoid of aif1 - ic2a state (1 MDa, Complex)
- 30s ribosomal protein s4 (21 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s2 (23 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s14 type z (6 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s17 (13 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s27ae (5 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Translation initiation factor 1a (13 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s7 (24 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s11 (14 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6swc
Q-score: 0.438
Coureux PD, Lazennec-Schurdevin C, Bourcier S, Mechulam Y, Schmitt E
Commun Biol (2020) 3 pp. 58-58 [ DOI: doi:10.1038/s42003-020-0780-0 Pubmed: 32029867 ]
- 30s ribosomal protein s10 (11 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s8e (14 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Translation initiation factor 1a (Complex from Pyrococcus abyssi GE5)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s19e (17 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s3 (23 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s4e (28 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s9 (15 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 50s ribosomal protein l7ae (13 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s3ae (22 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Archaeal translation initiation complex devoid of aif1 - ic2b state (1 MDa, Complex)
- 30s ribosomal protein s17e (8 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Water (18 Da, Ligand)
- Mrna (Complex from Pyrococcus abyssi GE5)
- Zn-ribbon rna-binding protein involved in translation (7 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s13 (16 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s19 (15 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Mrna (6 kDa, RNA from Pyrococcus abyssi GE5)
- Translation initiation factor 2 subunit alpha, beta (Complex from Pyrococcus abyssi GE5)
- Translation initiation factor 2 subunit alpha (30 kDa, Protein from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2))
- 30s ribosomal protein s8 (14 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- 30s ribosomal protein s24e (11 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein al41 (4 kDa, Protein from Pyrococcus abyssi GE5)
- Methionine (149 Da, Ligand)
- 30s ribosomal protein s28e (8 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Initiator met-trna fmet from e. coli (a1u72 variant) (24 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s27e (7 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Translation initiation factor 2 subunit gamma (Complex from Saccharolobus solfataricus P2)
- 30s ribosomal protein s12 (16 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Translation initiation factor 1a (13 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s15 (18 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s5 (26 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Translation initiation factor 2 subunit gamma (45 kDa, Protein from Pyrococcus abyssi GE5)
- 16s ribosomal rrna (487 kDa, RNA from Pyrococcus abyssi GE5)
- Magnesium ion (24 Da, Ligand)
- 30s ribosomal protein s6e (14 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s4 (21 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s2 (23 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s14 type z (6 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s17 (13 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Ribosomal proteins + rna (Complex from Pyrococcus abyssi GE5)
- Translation initiation factor 2 subunit beta (15 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s27ae (5 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- Trnai (Complex from Escherichia coli)
- 30s ribosomal protein s7 (24 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))
- 30s ribosomal protein s11 (14 kDa, Protein from Pyrococcus abyssi (strain GE5 / Orsay))