Yeast mitochondrial small subunit assembly intermediate (State 2)
Resolution: 3.13 Å
EM Method: Single-particle
Fitted PDBs: 8d8k
Q-score: 0.508
Harper NJ, Burnside C, Klinge S
Nature (2023) 614 pp. 175-181 [ DOI: doi:10.1038/s41586-022-05621-0 Pubmed: 36482135 ]
- Ribosomal protein var1, mitochondrial (47 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein mrp21, mitochondrial (20 kDa, Protein from Saccharomyces cerevisiae)
- Protein fyv4, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein mrp4, mitochondrial (44 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s25, mitochondrial (30 kDa, Protein from Saccharomyces cerevisiae)
- Mitochondrial 37s ribosomal protein s27 (12 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein mrp10, mitochondrial (10 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein mrp51, mitochondrial (39 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s7, mitochondrial (27 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein mrp1, mitochondrial (36 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s18, mitochondrial (24 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s28, mitochondrial (33 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s5, mitochondrial (34 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s10, mitochondrial (23 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein pet123, mitochondrial (36 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s16, mitochondrial (13 kDa, Protein from Saccharomyces cerevisiae)
- Water (18 Da, Ligand)
- Probable s-adenosyl-l-methionine-dependent rna methyltransferase rsm22, mitochondrial (72 kDa, Protein from Saccharomyces cerevisiae)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Mitochondrial group i intron splicing factor ccm1 (101 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein sws2, mitochondrial (16 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s17, mitochondrial (27 kDa, Protein from Saccharomyces cerevisiae)
- Yeast mitochondrial small subunit assembly intermediate (state 2) (1 MDa, Complex from Saccharomyces cerevisiae)
- 37s ribosomal protein s35, mitochondrial (39 kDa, Protein from Saccharomyces cerevisiae)
- Mrps12 isoform 1 (16 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s8, mitochondrial (17 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein rsm18, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein nam9, mitochondrial (56 kDa, Protein from Saccharomyces cerevisiae)
- 15s ribosomal rna (549 kDa, RNA from Saccharomyces cerevisiae)
- 37s ribosomal protein s9, mitochondrial (31 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s19, mitochondrial (10 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s23, mitochondrial (50 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- 37s ribosomal protein mrp13, mitochondrial (39 kDa, Protein from Saccharomyces cerevisiae)
- Unknown protein sequence (8 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein mrp17, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
- Iron/sulfur cluster (351 Da, Ligand)
- 37s ribosomal protein mrp2, mitochondrial (13 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s26, mitochondrial (30 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s24, mitochondrial (37 kDa, Protein from Saccharomyces cerevisiae)
Yeast mitochondrial small subunit assembly intermediate (State 3)
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8d8l
Q-score: 0.614
Harper NJ, Burnside C, Klinge S
Nature (2023) 614 pp. 175-181 [ DOI: doi:10.1038/s41586-022-05621-0 Pubmed: 36482135 ]
- Ribosomal protein var1, mitochondrial (47 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein mrp21, mitochondrial (20 kDa, Protein from Saccharomyces cerevisiae)
- Protein fyv4, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein mrp4, mitochondrial (44 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s25, mitochondrial (30 kDa, Protein from Saccharomyces cerevisiae)
- Mitochondrial 37s ribosomal protein s27 (12 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein mrp10, mitochondrial (10 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein mrp51, mitochondrial (39 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s7, mitochondrial (27 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein mrp1, mitochondrial (36 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s18, mitochondrial (24 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s28, mitochondrial (33 kDa, Protein from Saccharomyces cerevisiae)
- 3-hydroxyisobutyryl-coa hydrolase, mitochondrial (56 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s5, mitochondrial (34 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s10, mitochondrial (23 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein pet123, mitochondrial (36 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s16, mitochondrial (13 kDa, Protein from Saccharomyces cerevisiae)
- Water (18 Da, Ligand)
- Probable s-adenosyl-l-methionine-dependent rna methyltransferase rsm22, mitochondrial (72 kDa, Protein from Saccharomyces cerevisiae)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- 37s ribosomal protein sws2, mitochondrial (16 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s17, mitochondrial (27 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s35, mitochondrial (39 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s8, mitochondrial (17 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein rsm18, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein nam9, mitochondrial (56 kDa, Protein from Saccharomyces cerevisiae)
- 15s ribosomal rna (549 kDa, RNA from Saccharomyces cerevisiae)
- 37s ribosomal protein s9, mitochondrial (31 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s19, mitochondrial (10 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s23, mitochondrial (50 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- 37s ribosomal protein mrp13, mitochondrial (39 kDa, Protein from Saccharomyces cerevisiae)
- Unknown protein sequence (8 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein mrp17, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s12, mitochondrial (16 kDa, Protein from Saccharomyces cerevisiae)
- Iron/sulfur cluster (351 Da, Ligand)
- 37s ribosomal protein mrp2, mitochondrial (13 kDa, Protein from Saccharomyces cerevisiae)
- 37s ribosomal protein s26, mitochondrial (30 kDa, Protein from Saccharomyces cerevisiae)
- Yeast mitochondrial small subunit assembly intermediate (state 3) (1 MDa, Complex from Saccharomyces cerevisiae)
- 37s ribosomal protein s24, mitochondrial (37 kDa, Protein from Saccharomyces cerevisiae)