Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8oo0
Q-score: 0.494
Klein MA, Wild K, Kisonaite M, Sinning I
Nat Commun (2024) 15 pp. 716-716 [ DOI: doi:10.1038/s41467-024-44862-7 Pubmed: 38267453 ]
- 60s ribosomal protein l41-a (3 kDa, Protein from Thermochaetoides thermophila)
- 5.8s rrna (50 kDa, RNA from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein l37 (10 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l23-like protein (14 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s29 (6 kDa, Protein from Thermochaetoides thermophila)
- Putative ribosomal protein (17 kDa, Protein from Thermochaetoides thermophila)
- Ribosome-associated molecular chaperone ssb1 (67 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l38 (9 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s9-like protein (22 kDa, Protein from Thermochaetoides thermophila)
- Ribosomal protein l18e/l15p domain-containing protein (16 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s22-like protein (14 kDa, Protein from Thermochaetoides thermophila)
- Ubiquitin-like domain-containing protein (14 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s27a-like protein (17 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l9-like protein (21 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l39 (6 kDa, Protein from Thermochaetoides thermophila)
- 60s acidic ribosomal protein p0 (33 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s0 (31 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s14-like protein (16 kDa, Protein from Thermochaetoides thermophila)
- 28s rrna (1 MDa, RNA from Thermochaetoides thermophila)
- Dolichyl-diphosphooligosaccharide--protein glycotransferase (14 kDa, Protein from Thermochaetoides thermophila)
- Putative 60s ribosomal protein (13 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s28-like protein (7 kDa, Protein from Thermochaetoides thermophila)
- Putative 60s ribosomal protein (15 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l29 (7 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s1 (29 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l7-like protein (28 kDa, Protein from Thermochaetoides thermophila)
- 18s rrna (578 kDa, RNA from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s26 (13 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l25-like protein (17 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s8 (23 kDa, Protein from Thermochaetoides thermophila)
- Ribosomal protein s27-like protein (8 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l12-like protein (17 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l36 (12 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l14-like protein (16 kDa, Protein from Thermochaetoides thermophila)
- Methionine aminopeptidase 2 (41 kDa, Protein from Thermochaetoides thermophila)
- Putative ribosomal protein (20 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s10-like protein (18 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l26-like protein (15 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s23-like protein (15 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l30-like protein (11 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s13-like protein (16 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l33-like protein (12 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l17-like protein (20 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s17-like protein (16 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s16-like protein (15 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s12 (15 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l3-like protein (44 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s2-like protein (28 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l20 (20 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s25 (10 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s24 (15 kDa, Protein from Thermochaetoides thermophila)
- Map2 autoproteolysis product in complex with the 80s ribosome (Complex from Thermochaetoides thermophila)
- 40s ribosomal protein s19-like protein (17 kDa, Protein from Thermochaetoides thermophila)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s30 (6 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s6 (27 kDa, Protein from Thermochaetoides thermophila)
- Ribosomal protein l18-like protein (24 kDa, Protein from Thermochaetoides thermophila)
- 5s rrna (38 kDa, RNA from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l4-like protein (39 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l16-like protein (23 kDa, Protein from Thermochaetoides thermophila)
- Ribosomal protein l34-like protein (13 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l10-like protein (25 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s20-like protein (13 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l44-like protein (12 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l27 (15 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s7 (23 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s3-like protein (27 kDa, Protein from Thermochaetoides thermophila)
- Putative guanine nucleotide-binding protein (35 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s5-like protein (23 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s4 (29 kDa, Protein from Thermochaetoides thermophila)
- Ribosomal protein l19 (22 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l5-like protein (35 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l6 (22 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l21-like protein (18 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l22-like protein (14 kDa, Protein from Thermochaetoides thermophila)
- Hyaluronan/mrna-binding protein domain-containing protein (32 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l32-like protein (15 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l8 (29 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l43-like protein (10 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s11-like protein (18 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l2-like protein (27 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l13 (24 kDa, Protein from Thermochaetoides thermophila)
- 60s ribosomal protein l24 (18 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s21-like protein (10 kDa, Protein from Thermochaetoides thermophila)
- 40s ribosomal protein s15-like protein (17 kDa, Protein from Thermochaetoides thermophila)
- Ribosomal protein l15 (24 kDa, Protein from Thermochaetoides thermophila)
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7z3n
Q-score: 0.412
Kisonaite M, Wild K, Lapouge K, Gese GV, Kellner N, Hurt E, Sinning I
Nat Struct Mol Biol (2023) 30 pp. 670-677 [ DOI: doi:10.1038/s41594-023-00973-1 Pubmed: 37081320 ]
- 60s ribosomal protein l12-like protein (17 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s19-like protein (17 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Habp4_pai-rbp1 domain-containing protein (32 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l13 (24 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l32-like protein (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l2-like protein (27 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l20 (20 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s2-like protein (28 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l17-like protein (21 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein el39 (6 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l5-like protein (35 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l21-like protein (18 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s10-like protein (18 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s7 (23 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l41-a (3 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s30 (6 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s20-like protein (13 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s24 (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s5-like protein (23 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 26s rrna (1 MDa, RNA from Thermochaetoides thermophila DSM 1495)
- 5s rrna (38 kDa, RNA from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s11-like protein (18 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative ribosome associated protein (51 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Zinc ion (65 Da, Ligand)
- Putative heat shock protein (62 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- El38 (9 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s14-like protein (16 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s15-like protein (17 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative ribosomal protein (17 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- El24 (18 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s27a-like protein (17 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Nascent chain (2 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s23-like protein (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s26 (13 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s21-like protein (10 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative ribosomal protein (14 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l10-like protein (25 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l43-like protein (10 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l30-like protein (11 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 18s rrna (578 kDa, RNA from Thermochaetoides thermophila DSM 1495)
- 5.8s rrna (50 kDa, RNA from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l28-like protein (16 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein l18-like protein (24 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein l34-like protein (13 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s8 (23 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l8 (29 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein l19 (22 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein l37 (10 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s16-like protein (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein l15 (24 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s13-like protein (16 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s22-like protein (14 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative ribosomal protein (20 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s12 (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l22-like protein (14 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Dolichyl-diphosphooligosaccharide--protein glycotransferase (14 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l29 (7 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s3-like protein (27 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative 60s ribosomal protein (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- 60s ribosomal protein l4-like protein (39 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s9-like protein (22 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l36 (12 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s0 (31 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l44-like protein (12 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein us14 (6 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l3-like protein (44 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l26-like protein (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l25-like protein (17 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l6 (22 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein s27-like protein (8 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative guanine nucleotide-binding protein (35 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s28-like protein (7 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s acidic ribosomal protein p0 (33 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l14-like protein (16 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l7-like protein (28 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s17-like protein (16 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative 60s ribosomal protein (13 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s25 (10 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ul6 (21 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l33-like protein (12 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l23-like protein (14 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s6 (27 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s4 (29 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l27 (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s1 (29 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l16-like protein (23 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Chaetomium thermophilum rac on 80s ribosome (Complex from Chaetomium thermophilum var. thermophilum DSM 1495)
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7z3o
Q-score: 0.462
Kisonaite M, Wild K, Lapouge K, Gese GV, Kellner N, Hurt E, Sinning I
Nat Struct Mol Biol (2023) 30 pp. 670-677 [ DOI: doi:10.1038/s41594-023-00973-1 Pubmed: 37081320 ]
- 60s ribosomal protein l12-like protein (17 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s19-like protein (17 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Habp4_pai-rbp1 domain-containing protein (32 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l13 (24 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l32-like protein (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l2-like protein (27 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l20 (20 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s2-like protein (28 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l17-like protein (21 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein el39 (6 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l5-like protein (35 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l21-like protein (18 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s10-like protein (18 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s7 (23 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l41-a (3 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s30 (6 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s20-like protein (13 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s24 (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s5-like protein (23 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 26s rrna (1 MDa, RNA from Thermochaetoides thermophila DSM 1495)
- 5s rrna (38 kDa, RNA from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s11-like protein (18 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative ribosome associated protein (51 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Zinc ion (65 Da, Ligand)
- Putative heat shock protein (62 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- El38 (9 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s14-like protein (16 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s15-like protein (17 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative ribosomal protein (17 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- El24 (18 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s27a-like protein (17 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Nascent chain (2 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s23-like protein (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s26 (13 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s21-like protein (10 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative ribosomal protein (14 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l10-like protein (25 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l43-like protein (10 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l30-like protein (11 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 18s rrna (578 kDa, RNA from Thermochaetoides thermophila DSM 1495)
- 5.8s rrna (50 kDa, RNA from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l28-like protein (16 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein l18-like protein (24 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein l34-like protein (13 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s8 (23 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l8 (29 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein l19 (22 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein l37 (10 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s16-like protein (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein l15 (24 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s13-like protein (16 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s22-like protein (14 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative ribosomal protein (20 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s12 (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l22-like protein (14 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Dolichyl-diphosphooligosaccharide--protein glycotransferase (14 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l29 (7 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s3-like protein (27 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative 60s ribosomal protein (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- 60s ribosomal protein l4-like protein (39 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s9-like protein (22 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l36 (12 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s0 (31 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l44-like protein (12 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein us14 (6 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l3-like protein (44 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l26-like protein (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l25-like protein (17 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l6 (22 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal protein s27-like protein (8 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative guanine nucleotide-binding protein (35 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s28-like protein (7 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s acidic ribosomal protein p0 (33 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l14-like protein (16 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l7-like protein (28 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s17-like protein (16 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative 60s ribosomal protein (13 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s25 (10 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ul6 (21 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l33-like protein (12 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l23-like protein (14 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s6 (27 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s4 (29 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l27 (15 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 40s ribosomal protein s1 (29 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- 60s ribosomal protein l16-like protein (23 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Chaetomium thermophilum rac on 80s ribosome (Complex from Chaetomium thermophilum var. thermophilum DSM 1495)
Thermophilic eukaryotic 80S ribosome at idle POST state
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7olc
Q-score: 0.538
Kisonaite M, Wild K, Lapouge K, Ruppert T, Sinning I
Nat Commun (2022) 13 pp. 476-476 [ DOI: doi:10.1038/s41467-022-27967-9 Pubmed: 35079002 ]
- 60s ribosomal protein l29 (7 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l34-like protein (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l14-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l12-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 5s rrna (38 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- Dolichyl-diphosphooligosaccharide--protein glycotransferase (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative 60s ribosomal protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s22-like protein (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s16-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s0 (31 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s4 (29 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Magnesium ion (24 Da, Ligand)
- Ribosomal protein l19 (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative guanine nucleotide-binding protein (35 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Habp4_pai-rbp1 domain-containing protein (32 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s9-like protein (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s15-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l36 (12 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l10-like protein (25 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s25 (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s30 (6 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s20-like protein (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l28-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l44-like protein (12 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s21-like protein (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l8 (29 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ubiquitin (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l7-like protein (28 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 26s rrna (1 MDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- El39 (6 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative ribosomal protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l16-like protein (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l4-like protein (39 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative 60s ribosomal protein (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s14-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s acidic ribosomal protein p0 (33 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s8 (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l38-like protein (9 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l9-like protein (21 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l15 (24 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s7 (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l21-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s1 (29 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s28-like protein (7 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s3-like protein (27 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosome-associated molecular chaperone ssb1 (67 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l3-like protein (44 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l27 (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l32-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s10-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l41-a (3 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative ribosomal protein (20 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l37 (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Us14 (6 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s13-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s17-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Water (18 Da, Ligand)
- 60s ribosomal protein l2-like protein (27 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l23-like protein (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s24 (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s6 (27 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l26-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l33-like protein (12 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s23-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l17-like protein (21 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l13 (24 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l30-like protein (11 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l20 (20 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l24-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l25-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l43-like protein (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l6 (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Chaetomium thermophilum 80s ribosome (Cell from Chaetomium thermophilum var. thermophilum DSM 1495)
- 18s rrna (578 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s19-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l22-like protein (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l18-like protein (24 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s27a-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s26 (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s12 (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 5.8s rrna (50 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s5-like protein (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s2-like protein (28 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein s27-like protein (8 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s11-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l5-like protein (35 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7old
Q-score: 0.458
Kisonaite M, Wild K, Lapouge K, Ruppert T, Sinning I
Nat Commun (2022) 13 pp. 476-476 [ DOI: doi:10.1038/s41467-022-27967-9 Pubmed: 35079002 ]
- 60s ribosomal protein l7-like protein (28 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l18-like protein (24 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s0 (31 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l36 (12 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s16-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s12 (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s21-like protein (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative 60s ribosomal protein (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l4-like protein (39 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s28-like protein (7 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s4 (29 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l5-like protein (35 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s10-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l10-like protein (25 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l21-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s11-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s22-like protein (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l44-like protein (12 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l27 (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s7 (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l28-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l26-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Elongation factor 2 (93 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s9-like protein (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s23-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l23-like protein (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein us14 (6 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l16-like protein (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l43-like protein (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s2-like protein (28 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l41-a (3 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s acidic ribosomal protein p0 (33 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l17-like protein (21 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s8 (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein s27-like protein (8 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l30-like protein (11 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Habp4_pai-rbp1 domain-containing protein (32 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s17-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 18s rrna (578 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l2-like protein (27 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s3-like protein (27 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l12-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l33-like protein (12 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 5.8s rrna (50 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l19 (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Dolichyl-diphosphooligosaccharide--protein glycotransferase (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l38-like protein (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s13-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative ribosomal protein (20 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l37 (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l8 (29 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l24-like protein (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s1 (29 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s5-like protein (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 26s rrna (1 MDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l34-like protein (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s30 (6 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein el39 (6 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 5s rrna (38 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s24 (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l9-like protein (25 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l29 (7 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l15 (24 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l13 (24 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s20-like protein (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s15-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative ribosomal protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l14-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l6 (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s26 (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s14-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l20 (20 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ubiquitin (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s6 (27 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative guanine nucleotide-binding protein (35 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l3-like protein (44 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Chaetomium thermophilum 80s ribosome (Cell from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l32-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s25 (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative 60s ribosomal protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 60s ribosomal protein l22-like protein (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l25-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s27a-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Pe/e trna (24 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s19-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A
Resolution: 7.0 Å
EM Method: Single-particle
Fitted PDBs: 6rxt
Q-score: 0.166
Cheng J, Bassler J, Fischer P, Lau B, Kellner N, Kunze R, Griesel S, Kallas M, Berninghausen O, Strauss D, Beckmann R, Hurt E
Mol Cell (2019) 75 pp. 1256-1269.e7 [ Pubmed: 31378463 DOI: doi:10.1016/j.molcel.2019.06.032 ]
- Utp6 (46 kDa, Protein from Chaetomium thermophilum)
- Magnesium ion (24 Da, Ligand)
- Bms1 (134 kDa, Protein from Chaetomium thermophilum)
- Utp15 (60 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s14-like protein (16 kDa, Protein from Chaetomium thermophilum)
- Pre-rrna-processing protein pno1 (28 kDa, Protein from Chaetomium thermophilum)
- Utp4 (97 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s5-like protein (23 kDa, Protein from Chaetomium thermophilum)
- Utp30 (43 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s1 (29 kDa, Protein from Chaetomium thermophilum)
- Zinc ion (65 Da, Ligand)
- Noc4 (63 kDa, Protein from Chaetomium thermophilum)
- Periodic tryptophan protein 2-like protein (100 kDa, Protein from Chaetomium thermophilum)
- Snu13 (13 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s13-like protein (16 kDa, Protein from Chaetomium thermophilum)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Nop1 (32 kDa, Protein from Chaetomium thermophilum)
- Sof1 (50 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s23-like protein (15 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s16-like protein (15 kDa, Protein from Chaetomium thermophilum)
- Putative nucleolar protein (57 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s22-like protein (14 kDa, Protein from Chaetomium thermophilum)
- Putative ribosomal protein (17 kDa, Protein from Chaetomium thermophilum)
- Putative u3 small nucleolar ribonucleoprotein protein (86 kDa, Protein from Chaetomium thermophilum)
- Utp14 (104 kDa, Protein from Chaetomium thermophilum)
- Utp13" (100 kDa, Protein from Chaetomium thermophilum)
- Rrp9 (69 kDa, Protein from Chaetomium thermophilum)
- Utp16 (40 kDa, Protein from Chaetomium thermophilum)
- 90s pre-ribosome, state a (Complex from Chaetomium thermophilum)
- 40s ribosomal protein s9-like protein (22 kDa, Protein from Chaetomium thermophilum)
- Fcf2 (22 kDa, Protein from Chaetomium thermophilum)
- Faf1 (34 kDa, Protein from Chaetomium thermophilum)
- Emg1 (27 kDa, Protein from Chaetomium thermophilum)
- Utp5" (44 kDa, Protein from Chaetomium thermophilum)
- Nop58 (64 kDa, Protein from Chaetomium thermophilum)
- Rna 3'-terminal phosphate cyclase-like protein (43 kDa, Protein from Chaetomium thermophilum)
- U3 small nucleolar rna-associated protein 11 (31 kDa, Protein from Chaetomium thermophilum)
- Putative u3 small nucleolar ribonucleoprotein (34 kDa, Protein from Chaetomium thermophilum)
- Utp2 (103 kDa, Protein from Chaetomium thermophilum)
- Krr1 small subunit processome component (37 kDa, Protein from Chaetomium thermophilum)
- Utp18 (69 kDa, Protein from Chaetomium thermophilum)
- Kre33 (119 kDa, Protein from Chaetomium thermophilum)
- Utp3 (73 kDa, Protein from Chaetomium thermophilum)
- Utp24 (22 kDa, Protein from Chaetomium thermophilum)
- Utp12 (107 kDa, Protein from Chaetomium thermophilum)
- U3 snorna (73 kDa, RNA from Chaetomium thermophilum)
- Putative u3 snornp protein (115 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s7 (23 kDa, Protein from Chaetomium thermophilum)
- Utp7 (63 kDa, Protein from Chaetomium thermophilum)
- Utp8 (102 kDa, Protein from Chaetomium thermophilum)
- Utp10 (198 kDa, Protein from Chaetomium thermophilum)
- Utp17 (105 kDa, Protein from Chaetomium thermophilum)
- Imp3 (21 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s28-like protein (7 kDa, Protein from Chaetomium thermophilum)
- Enp1 (54 kDa, Protein from Chaetomium thermophilum)
- 35s ribosomal rna (758 kDa, RNA from Chaetomium thermophilum)
Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6rxu
Q-score: 0.44
Cheng J, Bassler J, Fischer P, Lau B, Kellner N, Kunze R, Griesel S, Kallas M, Berninghausen O, Strauss D, Beckmann R, Hurt E
Mol Cell (2019) 75 pp. 1256-1269.e7 [ Pubmed: 31378463 DOI: doi:10.1016/j.molcel.2019.06.032 ]
- Utp20 (295 kDa, Protein from Chaetomium thermophilum)
- Utp6 (46 kDa, Protein from Chaetomium thermophilum)
- Magnesium ion (24 Da, Ligand)
- Bms1 (134 kDa, Protein from Chaetomium thermophilum)
- Utp15 (60 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s14-like protein (16 kDa, Protein from Chaetomium thermophilum)
- 35s rrna (758 kDa, RNA from Chaetomium thermophilum)
- 40s ribosomal protein s24 (15 kDa, Protein from Chaetomium thermophilum)
- Pre-rrna-processing protein pno1 (28 kDa, Protein from Chaetomium thermophilum)
- Utp5 (44 kDa, Protein from Chaetomium thermophilum)
- Utp4 (97 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s5-like protein (23 kDa, Protein from Chaetomium thermophilum)
- Utp30 (43 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s1 (29 kDa, Protein from Chaetomium thermophilum)
- Zinc ion (65 Da, Ligand)
- Noc4 (63 kDa, Protein from Chaetomium thermophilum)
- Periodic tryptophan protein 2-like protein (100 kDa, Protein from Chaetomium thermophilum)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 40s ribosomal protein s13-like protein (16 kDa, Protein from Chaetomium thermophilum)
- Nop1 (32 kDa, Protein from Chaetomium thermophilum)
- Sof1 (50 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s6 (27 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s23-like protein (15 kDa, Protein from Chaetomium thermophilum)
- Nop56 (57 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s16-like protein (15 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s22-like protein (14 kDa, Protein from Chaetomium thermophilum)
- Putative ribosomal protein (17 kDa, Protein from Chaetomium thermophilum)
- U3 small nucleolar ribonucleoprotein protein lcp5-like protein (42 kDa, Protein from Chaetomium thermophilum)
- Putative u3 small nucleolar ribonucleoprotein protein (86 kDa, Protein from Chaetomium thermophilum)
- Utp14 (104 kDa, Protein from Chaetomium thermophilum)
- Rrp9 (69 kDa, Protein from Chaetomium thermophilum)
- Utp16 (40 kDa, Protein from Chaetomium thermophilum)
- Faf1 (34 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s9-like protein (22 kDa, Protein from Chaetomium thermophilum)
- Fcf2 (22 kDa, Protein from Chaetomium thermophilum)
- Emg1 (27 kDa, Protein from Chaetomium thermophilum)
- Bfr2 (69 kDa, Protein from Chaetomium thermophilum)
- Nop58 (64 kDa, Protein from Chaetomium thermophilum)
- Rna 3'-terminal phosphate cyclase-like protein (43 kDa, Protein from Chaetomium thermophilum)
- U3 small nucleolar rna-associated protein 11 (31 kDa, Protein from Chaetomium thermophilum)
- Putative u3 small nucleolar ribonucleoprotein (34 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s8 (23 kDa, Protein from Chaetomium thermophilum)
- Utp13 (100 kDa, Protein from Chaetomium thermophilum)
- Utp2 (103 kDa, Protein from Chaetomium thermophilum)
- Krr1 small subunit processome component (37 kDa, Protein from Chaetomium thermophilum)
- Snu13 (13 kDa, Protein from Chaetomium thermophilum)
- Utp18 (69 kDa, Protein from Chaetomium thermophilum)
- Kre33 (119 kDa, Protein from Chaetomium thermophilum)
- Utp3 (73 kDa, Protein from Chaetomium thermophilum)
- Ribosome biogenesis protein enp2 (75 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s4 (29 kDa, Protein from Chaetomium thermophilum)
- Utp24 (22 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s11-like protein (18 kDa, Protein from Chaetomium thermophilum)
- 90s pre-ribosome, state b1 (Complex from Chaetomium thermophilum)
- Utp12 (107 kDa, Protein from Chaetomium thermophilum)
- U3 snorna (73 kDa, RNA from Chaetomium thermophilum)
- Putative u3 snornp protein (115 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s7 (23 kDa, Protein from Chaetomium thermophilum)
- Utp7 (63 kDa, Protein from Chaetomium thermophilum)
- Utp8 (102 kDa, Protein from Chaetomium thermophilum)
- Utp10 (198 kDa, Protein from Chaetomium thermophilum)
- Utp17 (105 kDa, Protein from Chaetomium thermophilum)
- Imp3 (21 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s28-like protein (7 kDa, Protein from Chaetomium thermophilum)
- Enp1 (54 kDa, Protein from Chaetomium thermophilum)
Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6rxv
Q-score: 0.371
Cheng J, Bassler J, Fischer P, Lau B, Kellner N, Kunze R, Griesel S, Kallas M, Berninghausen O, Strauss D, Beckmann R, Hurt E
Mol Cell (2019) 75 pp. 1256-1269.e7 [ Pubmed: 31378463 DOI: doi:10.1016/j.molcel.2019.06.032 ]
- Rrp9 (69 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 35s ribosomal rna (758 kDa, RNA from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp24 (22 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Pre-rrna-processing protein pno1 (28 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Magnesium ion (24 Da, Ligand)
- Utp8 (102 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 90s pre-ribosome, state b2 (Complex from Chaetomium thermophilum)
- U3 small nucleolar rna-associated protein 11 (31 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Imp3 (21 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Periodic tryptophan protein 2-like protein (100 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Imp4 (34 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp30 (43 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Rna 3'-terminal phosphate cyclase-like protein (43 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Fcf2 (22 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp21 (115 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Emg1 (27 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Snu13 (13 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s16-like protein (15 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s28-like protein (7 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp5 (44 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s14-like protein (16 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp15 (60 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Mpp10 (86 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s7 (23 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s11-like protein (18 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s8 (23 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp13 (100 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Nop58 (64 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Bfr2 (69 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp16 (40 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp7 (63 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s5-like protein (23 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Faf1 (34 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- U3 small nucleolar rna-associated protein 22 (131 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s24 (15 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp18 (69 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s1 (29 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp2 (103 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp3 (73 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp4 (97 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp12 (107 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s4 (29 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s9-like protein (22 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp6 (46 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s13-like protein (16 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Sof1 (50 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Nop1 (32 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Kre33 (119 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Krr1 small subunit processome component (37 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp10 (198 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Rrp7 (36 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Enp1 (54 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- U3 snorna (73 kDa, RNA from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp14 (104 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp17 (105 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s6 (27 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Nop56 (57 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Rps18 (17 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s22-like protein (14 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Bms1 (134 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Utp20 (295 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- 40s ribosomal protein s23-like protein (15 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Noc4 (63 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- U3 small nucleolar ribonucleoprotein protein lcp5-like protein (42 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Ribosome biogenesis protein enp2 (75 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C
Resolution: 7.1 Å
EM Method: Single-particle
Fitted PDBs: 6rxx
Q-score: 0.156
Cheng J, Bassler J, Fischer P, Lau B, Kellner N, Kunze R, Griesel S, Kallas M, Berninghausen O, Strauss D, Beckmann R, Hurt E
Mol Cell (2019) 75 pp. 1256-1269.e7 [ Pubmed: 31378463 DOI: doi:10.1016/j.molcel.2019.06.032 ]
- Utp20 (295 kDa, Protein from Chaetomium thermophilum)
- Ribosomal protein s27-like protein (8 kDa, Protein from Chaetomium thermophilum)
- Utp6 (46 kDa, Protein from Chaetomium thermophilum)
- Bms1 (134 kDa, Protein from Chaetomium thermophilum)
- Utp15 (60 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s14-like protein (16 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s24 (15 kDa, Protein from Chaetomium thermophilum)
- Pre-rrna-processing protein pno1 (28 kDa, Protein from Chaetomium thermophilum)
- Utp5 (44 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s5-like protein (23 kDa, Protein from Chaetomium thermophilum)
- Utp4 (97 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s1 (29 kDa, Protein from Chaetomium thermophilum)
- Zinc ion (65 Da, Ligand)
- Noc4 (63 kDa, Protein from Chaetomium thermophilum)
- Periodic tryptophan protein 2-like protein (100 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s13-like protein (16 kDa, Protein from Chaetomium thermophilum)
- Nop1 (32 kDa, Protein from Chaetomium thermophilum)
- Sof1 (50 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s6 (27 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s23-like protein (15 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s16-like protein (15 kDa, Protein from Chaetomium thermophilum)
- Putative nucleolar protein (57 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s22-like protein (14 kDa, Protein from Chaetomium thermophilum)
- Putative ribosomal protein (17 kDa, Protein from Chaetomium thermophilum)
- Putative u3 small nucleolar ribonucleoprotein protein (86 kDa, Protein from Chaetomium thermophilum)
- Utp14 (104 kDa, Protein from Chaetomium thermophilum)
- Rrp9 (69 kDa, Protein from Chaetomium thermophilum)
- Utp16 (40 kDa, Protein from Chaetomium thermophilum)
- Faf1 (34 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s9-like protein (22 kDa, Protein from Chaetomium thermophilum)
- Fcf2 (22 kDa, Protein from Chaetomium thermophilum)
- Emg1 (27 kDa, Protein from Chaetomium thermophilum)
- Bfr2 (69 kDa, Protein from Chaetomium thermophilum)
- Nop58 (64 kDa, Protein from Chaetomium thermophilum)
- Rna 3'-terminal phosphate cyclase-like protein (43 kDa, Protein from Chaetomium thermophilum)
- U3 small nucleolar rna-associated protein 11 (31 kDa, Protein from Chaetomium thermophilum)
- Putative u3 small nucleolar ribonucleoprotein (34 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s8 (23 kDa, Protein from Chaetomium thermophilum)
- Utp13 (100 kDa, Protein from Chaetomium thermophilum)
- Rrp7 (36 kDa, Protein from Chaetomium thermophilum)
- Krr1 small subunit processome component (37 kDa, Protein from Chaetomium thermophilum)
- Ribosome biogenesis protein enp2 (75 kDa, Protein from Chaetomium thermophilum)
- Utp2 (103 kDa, Protein from Chaetomium thermophilum)
- Utp18 (69 kDa, Protein from Chaetomium thermophilum)
- Kre33 (119 kDa, Protein from Chaetomium thermophilum)
- Utp3 (73 kDa, Protein from Chaetomium thermophilum)
- Snu13 (13 kDa, Protein from Chaetomium thermophilum)
- 90s pre-ribosome, state c (Complex from Chaetomium thermophilum)
- 40s ribosomal protein s4 (29 kDa, Protein from Chaetomium thermophilum)
- Utp17 (105 kDa, Protein from Chaetomium thermophilum)
- Utp24 (22 kDa, Protein from Chaetomium thermophilum)
- U3 small nucleolar rna-associated protein 22 (131 kDa, Protein from Chaetomium thermophilum)
- Utp12 (107 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s11-like protein (18 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s19-like protein (17 kDa, Protein from Chaetomium thermophilum)
- Putative u3 snornp protein (115 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s7 (23 kDa, Protein from Chaetomium thermophilum)
- Utp7 (63 kDa, Protein from Chaetomium thermophilum)
- 35s ribosomal rna (599 kDa, RNA from Chaetomium thermophilum)
- Utp8 (102 kDa, Protein from Chaetomium thermophilum)
- Imp3 (21 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s28-like protein (7 kDa, Protein from Chaetomium thermophilum)
- Utp10 (198 kDa, Protein from Chaetomium thermophilum)
- Enp1 (54 kDa, Protein from Chaetomium thermophilum)
- U3 snorna (74 kDa, RNA from Chaetomium thermophilum)
Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 6rxy
Q-score: 0.286
Cheng J, Bassler J, Fischer P, Lau B, Kellner N, Kunze R, Griesel S, Kallas M, Berninghausen O, Strauss D, Beckmann R, Hurt E
Mol Cell (2019) 75 pp. 1256-1269.e7 [ Pubmed: 31378463 DOI: doi:10.1016/j.molcel.2019.06.032 ]
- Krr1 small subunit processome component (37 kDa, Protein from Chaetomium thermophilum)
- Snu13 (13 kDa, Protein from Chaetomium thermophilum)
- Faf1 (34 kDa, Protein from Chaetomium thermophilum)
- Utp15 (60 kDa, Protein from Chaetomium thermophilum)
- Bms1 (134 kDa, Protein from Chaetomium thermophilum)
- Utp12 (107 kDa, Protein from Chaetomium thermophilum)
- Utp13 (100 kDa, Protein from Chaetomium thermophilum)
- Utp14 (104 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s5-like protein (23 kDa, Protein from Chaetomium thermophilum)
- Sof1 (50 kDa, Protein from Chaetomium thermophilum)
- Utp2 (103 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s9-like protein (22 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s14-like protein (16 kDa, Protein from Chaetomium thermophilum)
- Utp7 (63 kDa, Protein from Chaetomium thermophilum)
- Utp3 (73 kDa, Protein from Chaetomium thermophilum)
- Utp18 (69 kDa, Protein from Chaetomium thermophilum)
- Rrp7 (36 kDa, Protein from Chaetomium thermophilum)
- Utp16 (40 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s28-like protein (7 kDa, Protein from Chaetomium thermophilum)
- U3 small nucleolar rna-associated protein 22 (131 kDa, Protein from Chaetomium thermophilum)
- Mpp10 (86 kDa, Protein from Chaetomium thermophilum)
- Kre33 (119 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s23-like protein (15 kDa, Protein from Chaetomium thermophilum)
- Imp3 (21 kDa, Protein from Chaetomium thermophilum)
- Rps18 (17 kDa, Protein from Chaetomium thermophilum)
- Rrp5 (197 kDa, Protein from Chaetomium thermophilum)
- Emg1 (27 kDa, Protein from Chaetomium thermophilum)
- Utp10 (198 kDa, Protein from Chaetomium thermophilum)
- Pre-rrna-processing protein pno1 (28 kDa, Protein from Chaetomium thermophilum)
- 35s rrna (749 kDa, RNA from Chaetomium thermophilum)
- 90s pre-ribosome, state a (Complex from Chaetomium thermophilum)
- Noc4 (63 kDa, Protein from Chaetomium thermophilum)
- Zinc ion (65 Da, Ligand)
- U3 small nucleolar rna-associated protein 11 (31 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s7 (23 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s22-like protein (14 kDa, Protein from Chaetomium thermophilum)
- Utp30 (43 kDa, Protein from Chaetomium thermophilum)
- Utp24 (22 kDa, Protein from Chaetomium thermophilum)
- Utp4 (97 kDa, Protein from Chaetomium thermophilum)
- Rrp9 (69 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s13-like protein (16 kDa, Protein from Chaetomium thermophilum)
- 40s ribosomal protein s16-like protein (15 kDa, Protein from Chaetomium thermophilum)
- Nop58 (64 kDa, Protein from Chaetomium thermophilum)
- Rna 3'-terminal phosphate cyclase-like protein (43 kDa, Protein from Chaetomium thermophilum)
- Utp21 (115 kDa, Protein from Chaetomium thermophilum)
- Utp5 (44 kDa, Protein from Chaetomium thermophilum)
- U3 snorna (73 kDa, RNA from Chaetomium thermophilum)
- Enp1 (54 kDa, Protein from Chaetomium thermophilum)
- Fcf2 (22 kDa, Protein from Chaetomium thermophilum)
- Utp6 (46 kDa, Protein from Chaetomium thermophilum)
- Nop1 (32 kDa, Protein from Chaetomium thermophilum)
- Nop56 (57 kDa, Protein from Chaetomium thermophilum)
- Imp4 (34 kDa, Protein from Chaetomium thermophilum)
- Utp17 (105 kDa, Protein from Chaetomium thermophilum)
- Periodic tryptophan protein 2-like protein (100 kDa, Protein from Chaetomium thermophilum)
- Utp8 (102 kDa, Protein from Chaetomium thermophilum)