Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 8g4i
Q-score: 0.544
Eiler DR, Wimberly BT, Bilodeau DY, Taliaferro JM, Reigan P, Rissland OS, Kieft JS
Structure (2024) 32 pp. 400-410.e4 [ Pubmed: 38242118 DOI: doi:10.1016/j.str.2023.12.015 ]
- 40s ribosomal protein s26 (12 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein s8 (19 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s13 (17 kDa, Protein from Giardia intestinalis assemblage A)
- Ssu ribosomal protein s12p (15 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein s7 (23 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s17 (15 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s3 (24 kDa, Protein from Giardia intestinalis assemblage A)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s3a (28 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein s4 (30 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s18 (17 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein s25 (10 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein s21 (9 kDa, Protein from Giardia intestinalis assemblage A)
- Ssu ribosomal protein s19e (fragment) (17 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s24 (14 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal subunit of the 80s giardia intestinalis assemblage a ribosome with emetine bound in v1 conformation (Complex from Giardia intestinalis assemblage A)
- Ribosomal protein s28 (7 kDa, Protein from Giardia intestinalis assemblage A)
- Water (18 Da, Ligand)
- Ribosomal protein s15 (16 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s10b (15 kDa, Protein from Giardia intestinalis assemblage A)
- 18s rrna (470 kDa, RNA from Giardia intestinalis assemblage A)
- Ribosomal protein s2 (26 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s20 (14 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s16 (17 kDa, Protein from Giardia intestinalis assemblage A)
- Ssu ribosomal protein s8p (fragment) (14 kDa, Protein from Giardia intestinalis assemblage A)
- Emetine (480 Da, Ligand)
- 40s ribosomal protein s6 (28 kDa, Protein from Giardia intestinalis assemblage A)
- Ssu ribosomal protein s7p (fragment) (21 kDa, Protein from Giardia intestinalis assemblage A)
- Ssu ribosomal protein s17p (23 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s27a (15 kDa, Protein from Giardia intestinalis assemblage A)
- Magnesium ion (24 Da, Ligand)
- Ribosomal protein s14 (15 kDa, Protein from Giardia intestinalis assemblage A)
- Trna (23 kDa, RNA from Giardia intestinalis assemblage A)
- Ribosomal protein s12 (14 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein s30 (7 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s27 (14 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s9 (21 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s29a (15 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein sa (28 kDa, Protein from Giardia intestinalis assemblage A)
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 8g4s
Q-score: 0.51
Eiler DR, Wimberly BT, Bilodeau DY, Taliaferro JM, Reigan P, Rissland OS, Kieft JS
Structure (2024) 32 pp. 400- [ Pubmed: 38242118 DOI: doi:10.1016/j.str.2023.12.015 ]
- 40s ribosomal protein s26 (12 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein s8 (19 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s13 (17 kDa, Protein from Giardia intestinalis assemblage A)
- Ssu ribosomal protein s12p (15 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein s7 (23 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s17 (15 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s3 (24 kDa, Protein from Giardia intestinalis assemblage A)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s3a (28 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein s4 (30 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s18 (17 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein s25 (10 kDa, Protein from Giardia intestinalis assemblage A)
- A-site trna (24 kDa, RNA from Giardia intestinalis assemblage A)
- 40s ribosomal protein s21 (9 kDa, Protein from Giardia intestinalis assemblage A)
- Ssu ribosomal protein s19e (fragment) (17 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s24 (14 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal subunit of the 80s giardia intestinalis assemblage a ribosome with emetine bound in v1 conformation (Complex from Giardia intestinalis assemblage A)
- Mrna (2 kDa, RNA from Giardia intestinalis assemblage A)
- Ribosomal protein s28 (7 kDa, Protein from Giardia intestinalis assemblage A)
- Water (18 Da, Ligand)
- Ribosomal protein s15 (16 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s10b (15 kDa, Protein from Giardia intestinalis assemblage A)
- 18s rrna (470 kDa, RNA from Giardia intestinalis assemblage A)
- Ribosomal protein s2 (26 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s20 (14 kDa, Protein from Giardia intestinalis assemblage A)
- P-site trna (24 kDa, RNA from Giardia intestinalis assemblage A)
- E-site trna (23 kDa, RNA from Giardia intestinalis assemblage A)
- Ribosomal protein s16 (17 kDa, Protein from Giardia intestinalis assemblage A)
- Ssu ribosomal protein s8p (fragment) (14 kDa, Protein from Giardia intestinalis assemblage A)
- Emetine (480 Da, Ligand)
- 40s ribosomal protein s6 (28 kDa, Protein from Giardia intestinalis assemblage A)
- Ssu ribosomal protein s7p (fragment) (21 kDa, Protein from Giardia intestinalis assemblage A)
- Ssu ribosomal protein s17p (23 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s27a (15 kDa, Protein from Giardia intestinalis assemblage A)
- Magnesium ion (24 Da, Ligand)
- Ribosomal protein s14 (15 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein s30 (7 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s12 (14 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s27 (14 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s9 (21 kDa, Protein from Giardia intestinalis assemblage A)
- Ribosomal protein s29a (15 kDa, Protein from Giardia intestinalis assemblage A)
- 40s ribosomal protein sa (28 kDa, Protein from Giardia intestinalis assemblage A)