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sample_name:"50S ribosomal protein L3" AND database:"EMDB" AND author_name:"Yokoyama T"
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E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state

Release date: April 3, 2024
Resolution: 2.32 Å
EM Method: Single-particle
Fitted PDBs: 8hsp
Q-score: 0.649

Akiyama N, Ishiguro K, Yokoyama T, Miyauchi K, Nagao A, Shirouzu M, Suzuki T

Nat Struct Mol Biol (2024) 31 pp. 817-825 [ Pubmed: 38538915 DOI: doi:10.1038/s41594-024-01238-1 ]

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E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state

Release date: April 3, 2024
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 8htz
Q-score: 0.657

Akiyama N, Ishiguro K, Yokoyama T, Miyauchi K, Nagao A, Shirouzu M, Suzuki T

Nat Struct Mol Biol (2024) 31 pp. 817-825 [ Pubmed: 38538915 DOI: doi:10.1038/s41594-024-01238-1 ]

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E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state

Release date: April 3, 2024
Resolution: 2.69 Å
EM Method: Single-particle
Fitted PDBs: 8hu1
Q-score: 0.599

Akiyama N, Ishiguro K, Yokoyama T, Miyauchi K, Nagao A, Shirouzu M, Suzuki T

Nat Struct Mol Biol (2024) 31 pp. 817-825 [ Pubmed: 38538915 DOI: doi:10.1038/s41594-024-01238-1 ]

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Dibekacin-bound E.coli 70S ribosome in the PURE system

Release date: Feb. 14, 2024
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 8ifb
Q-score: 0.662

Tomono J, Asano K, Chiashi T, Suzuki M, Igarashi M, Takahashi Y, Tanaka Y, Yokoyama T

J.Biochem. (2024) 175 pp. 587-598 [ Pubmed: 38227611 DOI: doi:10.1093/jb/mvae002 ]

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Arbekacin-bound E.coli 70S ribosome in the PURE system

Release date: Feb. 14, 2024
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8ifc
Q-score: 0.62

Tomono J, Asano K, Chiashi T, Suzuki M, Igarashi M, Takahashi Y, Tanaka Y, Yokoyama T

J.Biochem. (2024) 175 pp. 587-598 [ Pubmed: 38227611 DOI: doi:10.1093/jb/mvae002 ]

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Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)

Release date: Oct. 25, 2023
Resolution: 2.51 Å
EM Method: Single-particle
Fitted PDBs: 7y7c
Q-score: 0.621

Zhao X, Ma D, Ishiguro K, Saito H, Akichika S, Matsuzawa I, Mito M, Irie T, Ishibashi K, Wakabayashi K, Sakaguchi Y, Yokoyama T, Mishima Y, Shirouzu M, Iwasaki S, Suzuki T, Suzuki T

Cell (2023) 186 pp. 5517- [ Pubmed: 37992713 DOI: doi:10.1016/j.cell.2023.10.026 ]

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Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)

Release date: Oct. 25, 2023
Resolution: 2.58 Å
EM Method: Single-particle
Fitted PDBs: 7y7d
Q-score: 0.59

Zhao X, Ma D, Ishiguro K, Saito H, Akichika S, Matsuzawa I, Mito M, Irie T, Ishibashi K, Wakabayashi K, Sakaguchi Y, Yokoyama T, Mishima Y, Shirouzu M, Iwasaki S, Suzuki T, Suzuki T

Cell (2023) 186 pp. 5517- [ Pubmed: 37992713 DOI: doi:10.1016/j.cell.2023.10.026 ]

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Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)

Release date: Oct. 25, 2023
Resolution: 2.41 Å
EM Method: Single-particle
Fitted PDBs: 7y7e
Q-score: 0.629

Zhao X, Ma D, Ishiguro K, Saito H, Akichika S, Matsuzawa I, Mito M, Irie T, Ishibashi K, Wakabayashi K, Sakaguchi Y, Yokoyama T, Mishima Y, Shirouzu M, Iwasaki S, Suzuki T, Suzuki T

Cell (2023) 186 pp. 5517- [ Pubmed: 37992713 DOI: doi:10.1016/j.cell.2023.10.026 ]

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Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)

Release date: Oct. 25, 2023
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 7y7f
Q-score: 0.636

Zhao X, Ma D, Ishiguro K, Saito H, Akichika S, Matsuzawa I, Mito M, Irie T, Ishibashi K, Wakabayashi K, Sakaguchi Y, Yokoyama T, Mishima Y, Shirouzu M, Iwasaki S, Suzuki T, Suzuki T

Cell (2023) 186 pp. 5517- [ Pubmed: 37992713 DOI: doi:10.1016/j.cell.2023.10.026 ]

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Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)

Release date: Oct. 25, 2023
Resolution: 2.34 Å
EM Method: Single-particle
Fitted PDBs: 7y7g
Q-score: 0.636

Zhao X, Ma D, Ishiguro K, Saito H, Akichika S, Matsuzawa I, Mito M, Irie T, Ishibashi K, Wakabayashi K, Sakaguchi Y, Yokoyama T, Mishima Y, Shirouzu M, Iwasaki S, Suzuki T, Suzuki T

Cell (2023) 186 pp. 5517- [ DOI: doi:10.1016/j.cell.2023.10.026 Pubmed: 37992713 ]

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