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sample_name:"50S ribosomal protein L3" AND database:"EMDB" AND microscope_name:"FEI TITAN KRIOS"
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E. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement)

Release date: Jan. 22, 2025
Resolution: 1.95 Å
EM Method: Single-particle
Fitted PDBs: 9d89
Q-score: 0.692

Panteleev PV, Pichkur EB, Kruglikov RN, Paleskava A, Shulenina OV, Bolosov IA, Bogdanov IV, Safronova VN, Balandin SV, Marina VI, Kombarova TI, Korobova OV, Shamova OV, Myasnikov AG, Borzilov AI, Osterman IA, Sergiev PV, Bogdanov AA, Dontsova OA, Konevega AL, Ovchinnikova TV

Nat Commun (2024) 15 pp. 8925-8925 [ Pubmed: 39414793 DOI: doi:10.1038/s41467-024-53309-y ]

Sample: [Show more]

E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site

Release date: Nov. 6, 2024
Resolution: 2.25 Å
EM Method: Single-particle
Fitted PDBs: 8yuo
Q-score: 0.648

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ DOI: doi:10.1038/s41589-024-01726-x Pubmed: 39300229 ]

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E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA

Release date: Nov. 6, 2024
Resolution: 2.39 Å
EM Method: Single-particle
Fitted PDBs: 8yup
Q-score: 0.651

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ DOI: doi:10.1038/s41589-024-01726-x Pubmed: 39300229 ]

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E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA

Release date: Nov. 6, 2024
Resolution: 2.41 Å
EM Method: Single-particle
Fitted PDBs: 8yuq
Q-score: 0.651

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ DOI: doi:10.1038/s41589-024-01726-x Pubmed: 39300229 ]

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E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA

Release date: Nov. 6, 2024
Resolution: 2.47 Å
EM Method: Single-particle
Fitted PDBs: 8yur
Q-score: 0.624

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ DOI: doi:10.1038/s41589-024-01726-x Pubmed: 39300229 ]

Sample: [Show more]

E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA

Release date: Nov. 6, 2024
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 8yus
Q-score: 0.638

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ DOI: doi:10.1038/s41589-024-01726-x Pubmed: 39300229 ]

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Structure of YchF(H114A) on E.coli 50S ribosomal subunit

Release date: Aug. 28, 2024
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 8w51

Li X, Yu T, Li Q, Zeng F

To Be Published

Sample: [Show more]

Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation

Release date: Aug. 28, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8t5d

Acosta-Reyes FJ, Bhattacharjee S, Gottesman M, Frank J

J Mol Biol (2024) 436 pp. 168423-168423 [ DOI: doi:10.1016/j.jmb.2023.168423 Pubmed: 38185325 ]

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Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation

Release date: Aug. 28, 2024
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8t5h

Acosta-Reyes FJ, Bhattacharjee S, Gottesman M, Frank J

J Mol Biol (2024) 436 pp. 168423-168423 [ Pubmed: 38185325 DOI: doi:10.1016/j.jmb.2023.168423 ]

Sample: [Show more]

Structure of arbekacin bound Escherichia coli 70S ribosome

Release date: Aug. 14, 2024
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8q4f

Majumdar S, Parajuli NP, Ge X, Emmerich A, Sanyal S

To Be Published

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