Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6eri
Q-score: 0.514
Boerema AP, Aibara S, Paul B, Tobiasson V, Kimanius D, Forsberg BO, Wallden K, Lindahl E, Amunts A
Nat Plants (2018) 4 pp. 212-217 [ DOI: doi:10.1038/s41477-018-0129-6 Pubmed: 29610536 ]
- 50s ribosomal protein l2, chloroplastic (26 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l24, chloroplastic (14 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein 6, chloroplastic (5 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l33, chloroplastic (7 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l29, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s4, chloroplastic (23 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l14, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l34, chloroplastic (6 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l35, chloroplastic (8 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l23, chloroplastic (10 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s20, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s10 alpha, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- Bs1c (14 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l13, chloroplastic (22 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s6 alpha, chloroplastic (12 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s3, chloroplastic (24 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s9, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s19, chloroplastic (9 kDa, Protein from Spinacia oleracea)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l22, chloroplastic (19 kDa, Protein from Spinacia oleracea)
- Ribosome-recycling factor, chloroplastic (21 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l5, chloroplastic (23 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s5, chloroplastic (16 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s14, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l4, chloroplastic (23 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l19, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l36, chloroplastic (4 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l21, chloroplastic (18 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l28, chloroplastic (8 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s13, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s17, chloroplastic (9 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l32, chloroplastic (5 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s2, chloroplastic (24 kDa, Protein from Spinacia oleracea)
- Chloroplast ribosome in complex with rrf (Complex from Spinacia oleracea)
- Ribosome-binding factor psrp1, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l3, chloroplastic (24 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l15, chloroplastic (20 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s8, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s12, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 4.5s ribosomal rna (34 kDa, RNA from Spinacia oleracea)
- 30s ribosomal protein s15, chloroplastic (8 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l27, chloroplastic (12 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l31, chloroplastic (7 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l18, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s18, chloroplastic (6 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein 5 alpha, chloroplastic (6 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s31, chloroplastic (4 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s21, chloroplastic (7 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s16, chloroplastic (9 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l16, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 16s ribosomal rna (480 kDa, RNA from Spinacia oleracea)
- 30s ribosomal protein s7, chloroplastic (16 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l6, chloroplastic (19 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l17, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 23s ribosomal rna (911 kDa, RNA from Spinacia oleracea)
- 30s ribosomal protein s11, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l20, chloroplastic (14 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l9, chloroplastic (5 kDa, Protein from Spinacia oleracea)
- 5s ribosomal rna (38 kDa, RNA from Spinacia oleracea)
Structure of the large subunit of the chloro-ribosome
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 5h1s
Q-score: 0.453
Sci Rep (2016) 6 pp. 35793-35793 [ Pubmed: 27762343 DOI: doi:10.1038/srep35793 ]
- 50s ribosomal protein l23, chloroplastic (13 kDa, Protein from Spinach)
- Chloro-ribosome 50s (1 MDa, Complex from Spinacia oleracea)
- 50s ribosomal protein l15 (20 kDa, Protein from Spinach)
- 50s ribosomal protein l36, chloroplastic (4 kDa, Protein from Spinach)
- 50s ribosomal protein l35, chloroplastic (8 kDa, Protein from Spinach)
- 50s ribosomal protein l28 (9 kDa, Protein from Spinach)
- 50s ribosomal protein l6 (20 kDa, Protein from Spinach)
- 50s ribosomal protein l34, chloroplastic (6 kDa, Protein from Spinach)
- 50s ribosomal protein l33, chloroplastic (7 kDa, Protein from Spinach)
- 50s ribosomal protein l9 (17 kDa, Protein from Spinach)
- 50s ribosomal protein 6, chloroplastic (12 kDa, Protein from Spinach)
- 5s rrna (39 kDa, RNA from Spinach)
- 50s ribosomal protein l27 (15 kDa, Protein from Spinach)
- 50s ribosomal protein l20, chloroplastic (15 kDa, Protein from Spinach)
- 50s ribosomal protein l19, chloroplastic (17 kDa, Protein from Spinach)
- 50s ribosomal protein l18 (13 kDa, Protein from Spinach)
- 50s ribosomal protein l3 (24 kDa, Protein from Spinach)
- 50s ribosomal protein l31 (10 kDa, Protein from Spinach)
- 23s rrna (911 kDa, RNA from Spinach)
- 50s ribosomal protein l21, chloroplastic (22 kDa, Protein from Spinach)
- 50s ribosomal protein l16, chloroplastic (15 kDa, Protein from Spinach)
- 50s ribosomal protein l17 (13 kDa, Protein from Spinach)
- 50s ribosomal protein 5 alpha, chloroplastic (15 kDa, Protein from Spinach)
- 50s ribosomal protein l32, chloroplastic (6 kDa, Protein from Spinach)
- 50s ribosomal protein l13, chloroplastic (22 kDa, Protein from Spinach)
- Spinach chloroplast 4.5s rrna (34 kDa, RNA from Spinach)
- 50s ribosomal protein l22, chloroplastic (23 kDa, Protein from Spinach)
- 50s ribosomal protein l24, chloroplastic (16 kDa, Protein from Spinach)
- 50s ribosomal protein l2, chloroplastic (29 kDa, Protein from Spinach)
- 50s ribosomal protein l29 (12 kDa, Protein from Spinach)
- 50s ribosomal protein l4, chloroplastic (27 kDa, Protein from Spinach)
- 50s ribosomal protein l5, chloroplastic (24 kDa, Protein from Spinach)
- 50s ribosomal protein l14, chloroplastic (13 kDa, Protein from Spinach)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 5mlc
Q-score: 0.39
Graf M, Arenz S, Huter P, Donhofer A, Novacek J, Wilson DN
Nucleic Acids Res (2017) 45 pp. 2887-2896 [ Pubmed: 27986857 DOI: doi:10.1093/nar/gkw1272 ]
- 50s ribosomal protein l15, chloroplastic (29 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l14, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l20, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l27, chloroplastic (21 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l33, chloroplastic (7 kDa, Protein from Spinacia oleracea)
- 4.8s ribosomal rna, chloroplastic (33 kDa, RNA from Spinacia oleracea)
- Psrp6, chloroplastic (12 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l21, chloroplastic (28 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l16, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l29, chloroplastic (19 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l24, chloroplastic (21 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l5, chloroplastic (24 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l22, chloroplastic (23 kDa, Protein from Spinacia oleracea)
- 23s ribosomal rna, chloroplastic (911 kDa, RNA from Spinacia oleracea)
- 50s ribosomal protein l3, chloroplastic (33 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l36, chloroplastic (4 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l23, chloroplastic (21 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l32, chloroplastic (6 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l19, chloroplastic (26 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l34, chloroplastic (16 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l17, chloroplastic (14 kDa, Protein from Spinacia oleracea)
- Ribosome-recycling factor, chloroplastic (30 kDa, Protein from Spinacia oleracea)
- 5s ribosomal rna, chloroplastic (39 kDa, RNA from Spinacia oleracea)
- 50s ribosomal protein l2, chloroplastic (29 kDa, Protein from Spinacia oleracea)
- 50s subunit of the spinach chloroplast ribosome (Complex from Spinacia oleracea)
- 50s ribosomal protein l4, chloroplastic (32 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l18, chloroplastic (18 kDa, Protein from Spinacia oleracea)
- Psrp5alpha, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l9, chloroplastic (22 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l35, chloroplastic (17 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l28, chloroplastic (16 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l6, chloroplastic (24 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l13, chloroplastic (28 kDa, Protein from Spinacia oleracea)