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sample_name:"50S ribosomal protein L31" AND natural_source_ncbi_code:"562" AND database:"EMDB"
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Damaged 70S ribosome with PrfH bound

Release date: Feb. 5, 2025
Resolution: 2.65 Å
EM Method: Single-particle
Fitted PDBs: 9mor
Q-score: 0.367

Tian Y, Li Q, Fatma S, Jiang J, Jin H, Zeng F, Huang RH

bioRxiv (2025) [ DOI: doi:10.1101/2025.01.09.632186 Pubmed: 39829893 ]

Sample: [Show more]

Damaged 70S ribosome with PrfH bound

Release date: Feb. 5, 2025
Resolution: 2.78 Å
EM Method: Single-particle
Fitted PDBs: 9mq4
Q-score: 0.462

Tian Y, Li Q, Fatma S, Jiang J, Jin H, Zeng F, Huang RH

bioRxiv (2025) [ DOI: doi:10.1101/2025.01.09.632186 Pubmed: 39829893 ]

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E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site

Release date: Nov. 6, 2024
Resolution: 2.25 Å
EM Method: Single-particle
Fitted PDBs: 8yuo

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ DOI: doi:10.1038/s41589-024-01726-x Pubmed: 39300229 ]

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E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA

Release date: Nov. 6, 2024
Resolution: 2.39 Å
EM Method: Single-particle
Fitted PDBs: 8yup
Q-score: 0.651

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ Pubmed: 39300229 DOI: doi:10.1038/s41589-024-01726-x ]

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E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA

Release date: Nov. 6, 2024
Resolution: 2.41 Å
EM Method: Single-particle
Fitted PDBs: 8yuq

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ DOI: doi:10.1038/s41589-024-01726-x Pubmed: 39300229 ]

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E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA

Release date: Nov. 6, 2024
Resolution: 2.47 Å
EM Method: Single-particle
Fitted PDBs: 8yur

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ DOI: doi:10.1038/s41589-024-01726-x Pubmed: 39300229 ]

Sample: [Show more]

E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA

Release date: Nov. 6, 2024
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 8yus

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ DOI: doi:10.1038/s41589-024-01726-x Pubmed: 39300229 ]

Sample: [Show more]

70S initiation complex (tRNA-fMet M1 + CUG start codon)

Release date: Sept. 18, 2024
Resolution: 2.63 Å
EM Method: Single-particle
Fitted PDBs: 9ax7
Q-score: 0.603

Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM

J Biol Chem (2024) 300 pp. 107743-107743 [ DOI: doi:10.1016/j.jbc.2024.107743 Pubmed: 39222680 ]

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70S initiation complex (tRNA-fMet M1 + UUG start codon)

Release date: Sept. 18, 2024
Resolution: 2.59 Å
EM Method: Single-particle
Fitted PDBs: 9cg5
Q-score: 0.618

Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM

J Biol Chem (2024) 300 pp. 107743-107743 [ DOI: doi:10.1016/j.jbc.2024.107743 Pubmed: 39222680 ]

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70S initiation complex (tRNA-fMet M1 + GUG start codon)

Release date: Sept. 18, 2024
Resolution: 2.61 Å
EM Method: Single-particle
Fitted PDBs: 9cg6
Q-score: 0.615

Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM

J Biol Chem (2024) 300 pp. 107743-107743 [ DOI: doi:10.1016/j.jbc.2024.107743 Pubmed: 39222680 ]

Sample: [Show more]
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