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sample_name:"60S RIBOSOMAL PROTEIN L9" AND xref_links:"chebi" AND citation_journal_name:"NATURE"
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human 80S ribosome bound by a SKI2-exosome complex

Release date: Oct. 23, 2024
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9g8m
Q-score: 0.405

Kogel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schafer IB, Conti E

Nature (2024) 635 pp. 237-242 [ Pubmed: 39385025 DOI: doi:10.1038/s41586-024-08015-6 ]

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Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Release date: Aug. 21, 2024
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 9f1b
Q-score: 0.475

Lentzsch AM, Yudin D, Gamerdinger M, Chandrasekar S, Rabl L, Scaiola A, Deuerling E, Ban N, Shan SO

Nature (2024) 633 pp. 718-724 [ Pubmed: 39169182 DOI: doi:10.1038/s41586-024-07846-7 ]

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Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E

Release date: Aug. 21, 2024
Resolution: 3.78 Å
EM Method: Single-particle
Fitted PDBs: 9f1c
Q-score: 0.371

Lentzsch AM, Yudin D, Gamerdinger M, Chandrasekar S, Rabl L, Scaiola A, Deuerling E, Ban N, Shan SO

Nature (2024) 633 pp. 718-724 [ Pubmed: 39169182 DOI: doi:10.1038/s41586-024-07846-7 ]

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Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK

Release date: Aug. 21, 2024
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 9f1d
Q-score: 0.447

Lentzsch AM, Yudin D, Gamerdinger M, Chandrasekar S, Rabl L, Scaiola A, Deuerling E, Ban N, Shan SO

Nature (2024) 633 pp. 718-724 [ Pubmed: 39169182 DOI: doi:10.1038/s41586-024-07846-7 ]

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60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)

Release date: Feb. 21, 2024
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8ohd
Q-score: 0.531

DaRosa PA, Penchev I, Gumbin SC, Scavone F, Wachalska M, Paulo JA, Ordureau A, Peter JJ, Kulathu Y, Harper JW, Becker T, Beckmann R, Kopito RR

Nature (2024) 627 pp. 445-452 [ Pubmed: 38383785 DOI: doi:10.1038/s41586-024-07073-0 ]

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60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)

Release date: Feb. 21, 2024
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8oj0
Q-score: 0.463

DaRosa PA, Penchev I, Gumbin SC, Scavone F, Wachalska M, Paulo JA, Ordureau A, Peter JJ, Kulathu Y, Harper JW, Becker T, Beckmann R, Kopito RR

Nature (2024) 627 pp. 445-452 [ Pubmed: 38383785 DOI: doi:10.1038/s41586-024-07073-0 ]

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60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)

Release date: Feb. 21, 2024
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8oj5
Q-score: 0.57

DaRosa PA, Penchev I, Gumbin SC, Scavone F, Wachalska M, Paulo JA, Ordureau A, Peter JJ, Kulathu Y, Harper JW, Becker T, Beckmann R, Kopito RR

Nature (2024) 627 pp. 445-452 [ Pubmed: 38383785 DOI: doi:10.1038/s41586-024-07073-0 ]

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60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)

Release date: Feb. 21, 2024
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8oj8
Q-score: 0.468

DaRosa PA, Penchev I, Gumbin SC, Scavone F, Wachalska M, Paulo JA, Ordureau A, Peter JJ, Kulathu Y, Harper JW, Becker T, Beckmann R, Kopito RR

Nature (2024) 627 pp. 445-452 [ Pubmed: 38383785 DOI: doi:10.1038/s41586-024-07073-0 ]

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UFL1 E3 ligase bound 60S ribosome

Release date: Feb. 21, 2024
Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 8qfd
Q-score: 0.684

Makhlouf L, Peter JJ, Magnussen HM, Thakur R, Millrine D, Minshull TC, Harrison G, Varghese J, Lamoliatte F, Foglizzo M, Macartney T, Calabrese AN, Zeqiraj E, Kulathu Y

Nature (2024) 627 pp. 437-444 [ DOI: doi:10.1038/s41586-024-07093-w Pubmed: 38383789 ]

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80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex

Release date: Sept. 20, 2023
Resolution: 1.97 Å
EM Method: Single-particle
Fitted PDBs: 8ccs
Q-score: 0.64

Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

Nature (2024) 625 pp. 393-400 [ DOI: doi:10.1038/s41586-023-06780-4 Pubmed: 38030725 ]

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