Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7toq
Q-score: 0.362
Loveland AB, Svidritskiy E, Susorov D, Lee S, Park A, Zvornicanin S, Demo G, Gao FB, Korostelev AA
Nat Commun (2022) 13 pp. 2776-2776 [ Pubmed: 35589706 DOI: doi:10.1038/s41467-022-30418-0 ]
- 60s ribosomal protein l6 (28 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l23 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l24 (7 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- 5.8s rrna (50 kDa, RNA from Oryctolagus cuniculus)
- Ul23 (13 kDa, Protein from Oryctolagus cuniculus)
- El39 (6 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s15 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l37 (10 kDa, Protein from Oryctolagus cuniculus)
- Us9 (16 kDa, Protein from Oryctolagus cuniculus)
- Es21 (9 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l35a (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l31 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l9 (21 kDa, Protein from Oryctolagus cuniculus)
- El22 (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s11 (17 kDa, Protein from Oryctolagus cuniculus)
- 28s rrna (1 MDa, RNA from Oryctolagus cuniculus)
- Receptor of activated protein c kinase 1 (34 kDa, Protein from Oryctolagus cuniculus)
- Es7 (21 kDa, Protein from Oryctolagus cuniculus)
- El8 (27 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l35 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l26 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s17 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (3 kDa, Protein from Oryctolagus cuniculus)
- Mamalian 80s ribosome bound with the als/ftd-associated dipeptide repeat protein pr20 (4 MDa, Complex from Oryctolagus cuniculus)
- 40s ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l14 (16 kDa, Protein from Oryctolagus cuniculus)
- Ul2 (26 kDa, Protein from Oryctolagus cuniculus)
- El40 (6 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l21 (18 kDa, Protein from Oryctolagus cuniculus)
- El30 (10 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3 (25 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s9 (21 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l27a (16 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l19 (21 kDa, Protein from Oryctolagus cuniculus)
- Es26 (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27a (7 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l37a (10 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s28 (7 kDa, Protein from Oryctolagus cuniculus)
- Ul30 (26 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l17 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- Rna (5'-r(*cp*ap*cp*ap*up*gp*up*up*cp*c)-3') (3 kDa, RNA from Saccharomyces cerevisiae)
- El18 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l3 (45 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s30 (6 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l12 (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (11 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l34 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l4 (41 kDa, Protein from Oryctolagus cuniculus)
- Trnafmet (24 kDa, RNA from Escherichia coli K-12)
- 40s_sa_c domain-containing protein (24 kDa, Protein from Oryctolagus cuniculus)
- Pr20, als/ftd dipeptide repeat protein (5 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s20 (11 kDa, Protein from Oryctolagus cuniculus)
- Ul13 (23 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l5 (34 kDa, Protein from Oryctolagus cuniculus)
- El20 (20 kDa, Protein from Oryctolagus cuniculus)
- El41 (3 kDa, Protein from Oryctolagus cuniculus)
- El29 (11 kDa, Protein from Oryctolagus cuniculus)
- El38 (8 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (13 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (27 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s14 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s13 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s5 (21 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l32 (15 kDa, Protein from Oryctolagus cuniculus)
- 18s rrna (548 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s2 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l11 (19 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s25 (8 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s18 (16 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s10 (11 kDa, Protein from Oryctolagus cuniculus)
- El42 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l28 (14 kDa, Protein from Oryctolagus cuniculus)
- Es19 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- El13 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s29 (6 kDa, Protein from Oryctolagus cuniculus)
- 5s rrna (38 kDa, RNA from Oryctolagus cuniculus)
Thermophilic eukaryotic 80S ribosome at idle POST state
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7olc
Q-score: 0.538
Kisonaite M, Wild K, Lapouge K, Ruppert T, Sinning I
Nat Commun (2022) 13 pp. 476-476 [ Pubmed: 35079002 DOI: doi:10.1038/s41467-022-27967-9 ]
- 40s ribosomal protein s20-like protein (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Habp4_pai-rbp1 domain-containing protein (32 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l10-like protein (25 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l22-like protein (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l30-like protein (11 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s28-like protein (7 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s acidic ribosomal protein p0 (33 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative ribosomal protein (20 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l20 (20 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l24-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l14-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosome-associated molecular chaperone ssb1 (67 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l37 (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s15-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l3-like protein (44 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l38-like protein (9 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l4-like protein (39 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- El39 (6 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s3-like protein (27 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative 60s ribosomal protein (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s19-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s8 (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s27a-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l29 (7 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative ribosomal protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l12-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 26s rrna (1 MDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l44-like protein (12 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l36 (12 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l7-like protein (28 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s17-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s4 (29 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s14-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l18-like protein (24 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 5.8s rrna (50 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s21-like protein (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative guanine nucleotide-binding protein (35 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l21-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l26-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s9-like protein (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s25 (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l23-like protein (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s12 (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Chaetomium thermophilum 80s ribosome (Cell from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l41-a (3 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l34-like protein (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s7 (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l8 (29 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l32-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l15 (24 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ubiquitin (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein s27-like protein (8 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 5s rrna (38 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l5-like protein (35 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s22-like protein (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s0 (31 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l43-like protein (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l13 (24 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s1 (29 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s5-like protein (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l6 (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l16-like protein (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s24 (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Us14 (6 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s26 (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l19 (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l2-like protein (27 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l9-like protein (21 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l27 (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l28-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s6 (27 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s2-like protein (28 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l25-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Dolichyl-diphosphooligosaccharide--protein glycotransferase (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s11-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s16-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Water (18 Da, Ligand)
- 60s ribosomal protein l33-like protein (12 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative 60s ribosomal protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s13-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 18s rrna (578 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l17-like protein (21 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s23-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s10-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s30 (6 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7old
Q-score: 0.458
Kisonaite M, Wild K, Lapouge K, Ruppert T, Sinning I
Nat Commun (2022) 13 pp. 476-476 [ Pubmed: 35079002 DOI: doi:10.1038/s41467-022-27967-9 ]
- 40s ribosomal protein s20-like protein (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein el39 (6 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Habp4_pai-rbp1 domain-containing protein (32 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l10-like protein (25 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l22-like protein (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l30-like protein (11 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s28-like protein (7 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s acidic ribosomal protein p0 (33 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative ribosomal protein (20 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 26s rrna (1 MDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l20 (20 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l14-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Elongation factor 2 (93 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l37 (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s15-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l3-like protein (44 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l9-like protein (25 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l4-like protein (39 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l24-like protein (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s3-like protein (27 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative 60s ribosomal protein (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s19-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s8 (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s27a-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l16-like protein (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l29 (7 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative ribosomal protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l12-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l38-like protein (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l44-like protein (12 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l36 (12 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 60s ribosomal protein l7-like protein (28 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Pe/e trna (24 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s17-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s4 (29 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s14-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l18-like protein (24 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 5.8s rrna (50 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s21-like protein (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative guanine nucleotide-binding protein (35 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l21-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l26-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s9-like protein (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s25 (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l23-like protein (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s12 (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Chaetomium thermophilum 80s ribosome (Cell from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l41-a (3 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l34-like protein (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s7 (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l8 (29 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l32-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l15 (24 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein s27-like protein (8 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 5s rrna (38 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l5-like protein (35 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s22-like protein (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s0 (31 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l43-like protein (10 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l13 (24 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s1 (29 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s5-like protein (23 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l6 (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s24 (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ubiquitin (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s26 (13 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein l19 (22 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l2-like protein (27 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l27 (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l28-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s6 (27 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s2-like protein (28 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l25-like protein (17 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Dolichyl-diphosphooligosaccharide--protein glycotransferase (14 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s11-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s16-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l33-like protein (12 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Putative 60s ribosomal protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s13-like protein (16 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 18s rrna (578 kDa, RNA from Chaetomium thermophilum var. thermophilum DSM 1495)
- 60s ribosomal protein l17-like protein (21 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s23-like protein (15 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- 40s ribosomal protein s10-like protein (18 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s30 (6 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Ribosomal protein us14 (6 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
80S ribosome from mouse bound to eEF2 (Class I)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7ls2
Q-score: 0.418
Smith PR, Loerch S, Kunder N, Stanowick AD, Lou TF, Campbell ZT
Nat Commun (2021) 12 pp. 6789-6789 [ Pubmed: 34815424 DOI: doi:10.1038/s41467-021-27160-4 ]
- 60s ribosomal protein l17 (21 kDa, Protein from Mus musculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Mus musculus)
- 40s ribosomal protein s18 (17 kDa, Protein from Mus musculus)
- 60s ribosomal protein l29 (17 kDa, Protein from Mus musculus)
- 60s ribosomal protein l31 (14 kDa, Protein from Mus musculus)
- 60s ribosomal protein l3 (46 kDa, Protein from Mus musculus)
- 60s ribosomal protein l18a (20 kDa, Protein from Mus musculus)
- 60s ribosomal protein l23a (17 kDa, Protein from Mus musculus)
- 40s ribosomal protein s29 (6 kDa, Protein from Mus musculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Mus musculus)
- 60s ribosomal protein l24 (17 kDa, Protein from Mus musculus)
- 5s rrna (38 kDa, RNA from Mus musculus)
- 40s ribosomal protein s9 (22 kDa, Protein from Mus musculus)
- 40s ribosomal protein s23 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l28 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l12 (17 kDa, Protein from Mus musculus)
- Isoform 3 of plasminogen activator inhibitor 1 rna-binding protein (42 kDa, Protein from Mus musculus)
- 60s ribosomal protein l13 (24 kDa, Protein from Mus musculus)
- 40s ribosomal protein s25 (13 kDa, Protein from Mus musculus)
- 40s ribosomal protein s24 (15 kDa, Protein from Mus musculus)
- 60s acidic ribosomal protein p0 (34 kDa, Protein from Mus musculus)
- 28s rrna (1 MDa, RNA from Mus musculus)
- 60s ribosomal protein l26 (17 kDa, Protein from Mus musculus)
- 60s ribosomal protein l8 (28 kDa, Protein from Mus musculus)
- 40s ribosomal protein s14 (16 kDa, Protein from Mus musculus)
- 60s ribosomal protein l30 (12 kDa, Protein from Mus musculus)
- 60s ribosomal protein l35 (14 kDa, Protein from Mus musculus)
- 40s ribosomal protein s10 (18 kDa, Protein from Mus musculus)
- Ubiquitin-40s ribosomal protein s27a (17 kDa, Protein from Mus musculus)
- 60s ribosomal protein l7 (31 kDa, Protein from Mus musculus)
- 60s ribosomal protein l22 (14 kDa, Protein from Mus musculus)
- 40s ribosomal protein s26 (13 kDa, Protein from Mus musculus)
- 60s ribosomal protein l15 (24 kDa, Protein from Mus musculus)
- 60s ribosomal protein l37 (11 kDa, Protein from Mus musculus)
- 40s ribosomal protein s11 (18 kDa, Protein from Mus musculus)
- 40s ribosomal protein s16 (16 kDa, Protein from Mus musculus)
- 5.8s rrna (50 kDa, RNA from Mus musculus)
- 60s ribosomal protein l6 (33 kDa, Protein from Mus musculus)
- 60s ribosomal protein l13a (23 kDa, Protein from Mus musculus)
- Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Mus musculus)
- 40s ribosomal protein s13 (17 kDa, Protein from Mus musculus)
- Water (18 Da, Ligand)
- 18s rrna (603 kDa, RNA from Mus musculus)
- 60s ribosomal protein l9 (21 kDa, Protein from Mus musculus)
- 40s ribosomal protein s5 (22 kDa, Protein from Mus musculus)
- 60s ribosomal protein l32 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l4 (47 kDa, Protein from Mus musculus)
- 40s ribosomal protein sa (32 kDa, Protein from Mus musculus)
- 60s ribosomal protein l5 (34 kDa, Protein from Mus musculus)
- 40s ribosomal protein s15a (14 kDa, Protein from Mus musculus)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 40s ribosomal protein s27-like (9 kDa, Protein from Mus musculus)
- 60s ribosomal protein l39 (6 kDa, Protein from Mus musculus)
- 40s ribosomal protein s2 (31 kDa, Protein from Mus musculus)
- Trna (24 kDa, RNA from Mus musculus)
- 40s ribosomal protein s3 (26 kDa, Protein from Mus musculus)
- 60s ribosomal protein l10-like (24 kDa, Protein from Mus musculus)
- 40s ribosomal protein s28 (7 kDa, Protein from Mus musculus)
- 60s ribosomal protein l23 (14 kDa, Protein from Mus musculus)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Mus musculus)
- 60s ribosomal protein l36 (12 kDa, Protein from Mus musculus)
- 60s ribosomal protein l10a (24 kDa, Protein from Mus musculus)
- 60s ribosomal protein l21 (18 kDa, Protein from Mus musculus)
- 60s ribosomal protein l36a (12 kDa, Protein from Mus musculus)
- 60s ribosomal protein l18 (21 kDa, Protein from Mus musculus)
- 40s ribosomal protein s3a (29 kDa, Protein from Mus musculus)
- Elongation factor 2 (95 kDa, Protein from Mus musculus)
- 60s ribosomal protein l34 (13 kDa, Protein from Mus musculus)
- 60s ribosomal protein l27a (16 kDa, Protein from Mus musculus)
- Zinc ion (65 Da, Ligand)
- 80s ribosome from mous ebound to eef2 (4 MDa, Complex from Mus musculus)
- 60s ribosomal protein l38 (8 kDa, Protein from Mus musculus)
- 40s ribosomal protein s15 (17 kDa, Protein from Mus musculus)
- 40s ribosomal protein s19 (16 kDa, Protein from Mus musculus)
- 60s ribosomal protein l37a (10 kDa, Protein from Mus musculus)
- 60s ribosomal protein l11 (20 kDa, Protein from Mus musculus)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Mus musculus)
- 60s ribosomal protein l14 (23 kDa, Protein from Mus musculus)
- 40s ribosomal protein s7 (22 kDa, Protein from Mus musculus)
- 60s ribosomal protein l35a (12 kDa, Protein from Mus musculus)
- 40s ribosomal protein s17 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l7a (30 kDa, Protein from Mus musculus)
- 40s ribosomal protein s21 (9 kDa, Protein from Mus musculus)
- 40s ribosomal protein s6 (28 kDa, Protein from Mus musculus)
- 40s ribosomal protein s30 (14 kDa, Protein from Mus musculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l19 (23 kDa, Protein from Mus musculus)
- 40s ribosomal protein s20 (13 kDa, Protein from Mus musculus)
- 40s ribosomal protein s12 (14 kDa, Protein from Mus musculus)
- Magnesium ion (24 Da, Ligand)
Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 7nwh
Q-score: 0.348
Powers KT, Stevenson-Jones F, Yadav SKN, Amthor B, Bufton JC, Borucu U, Shen D, Becker JP, Lavysh D, Hentze MW, Kulozik AE, Neu-Yilik G, Schaffitzel C
Nucleic Acids Res (2021) 49 pp. 7665-7679 [ DOI: doi:10.1093/nar/gkab532 Pubmed: 34157102 ]
- Ribosomal protein el43 (12 kDa, Protein from Oryctolagus cuniculus)
- Ul22 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l14 (23 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul13 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (15 kDa, Protein from Oryctolagus cuniculus)
- El39 (6 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s25 (13 kDa, Protein from Oryctolagus cuniculus)
- Ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s9 (22 kDa, Protein from Oryctolagus cuniculus)
- El31 (12 kDa, Protein from Oryctolagus cuniculus)
- Blasticidin s (422 Da, Ligand)
- 5.8s ribosomal rna (48 kDa, RNA from Oryctolagus cuniculus)
- El28 (15 kDa, Protein from Oryctolagus cuniculus)
- Ul12 (21 kDa, Protein from Oryctolagus cuniculus)
- El14 (14 kDa, Protein from Oryctolagus cuniculus)
- S7 (21 kDa, Protein from Oryctolagus cuniculus)
- Mrna (4 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l19 (23 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l6 (33 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s_sa_c domain-containing protein (32 kDa, Protein from Oryctolagus cuniculus)
- 28s ribosomal rna (1 MDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s17 (16 kDa, Protein from Oryctolagus cuniculus)
- L9 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s11 (18 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s26 (13 kDa, Protein from Oryctolagus cuniculus)
- El29 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l32 (15 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27a (16 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27a (7 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l18a (20 kDa, Protein from Oryctolagus cuniculus)
- El18 (21 kDa, Protein from Oryctolagus cuniculus)
- L38 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- L7a (27 kDa, Protein from Oryctolagus cuniculus)
- Erf3a (48 kDa, Protein from Oryctolagus cuniculus)
- Epididymis tissue sperm binding protein li 3a (34 kDa, Protein from Oryctolagus cuniculus)
- Mammalian pre-termination 80s ribosome with erf1 and erf3 bound by blasticidin s. (3 MDa, Complex from Oryctolagus cuniculus)
- El33 (12 kDa, Protein from Oryctolagus cuniculus)
- Ul30 (29 kDa, Protein from Oryctolagus cuniculus)
- L22 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us19 (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l24-like protein (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l8 (27 kDa, Protein from Oryctolagus cuniculus)
- Ul3 (45 kDa, Protein from Oryctolagus cuniculus)
- El21 (18 kDa, Protein from Oryctolagus cuniculus)
- Us11 (16 kDa, Protein from Oryctolagus cuniculus)
- 18s ribosomal rna (573 kDa, RNA from Oryctolagus cuniculus)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- 40s ribosomal protein us12 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (29 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s2 (27 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s21 (9 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (12 kDa, Protein from Oryctolagus cuniculus)
- El30 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l11 (20 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (11 kDa, Protein from Oryctolagus cuniculus)
- S29 (6 kDa, Protein from Oryctolagus cuniculus)
- Ul23 (17 kDa, Protein from Oryctolagus cuniculus)
- Es19 (16 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s28 (7 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (30 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l13 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l10 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s5 (22 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s20 (13 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic peptide chain release factor subunit 1 (49 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us13 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (17 kDa, Protein from Oryctolagus cuniculus)
- El42 (16 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (13 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s30 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l34 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3 (31 kDa, Protein from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (34 kDa, Protein from Oryctolagus cuniculus)
- Ul4 (42 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s16 (17 kDa, Protein from Oryctolagus cuniculus)
- 5s ribosomal rna (38 kDa, RNA from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l5 (34 kDa, Protein from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein el40 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s10 (17 kDa, Protein from Oryctolagus cuniculus)
Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S
Resolution: 3.13 Å
EM Method: Single-particle
Fitted PDBs: 7nwi
Q-score: 0.5
Powers KT, Stevenson-Jones F, Yadav SKN, Amthor B, Bufton JC, Borucu U, Shen D, Becker JP, Lavysh D, Hentze MW, Kulozik AE, Neu-Yilik G, Schaffitzel C
Nucleic Acids Res (2021) 49 pp. 7665-7679 [ DOI: doi:10.1093/nar/gkab532 Pubmed: 34157102 ]
- 60s ribosomal protein l5 (34 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l7a (27 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l14 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s11 (18 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (15 kDa, Protein from Oryctolagus cuniculus)
- 5.8s ribosomal rna (50 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s9 (22 kDa, Protein from Oryctolagus cuniculus)
- Blasticidin s (422 Da, Ligand)
- El14 (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l4 (47 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s28 (7 kDa, Protein from Oryctolagus cuniculus)
- El28 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l22 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- L13 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l19 (23 kDa, Protein from Oryctolagus cuniculus)
- El33 (12 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es7 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l6 (33 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l40 (14 kDa, Protein from Oryctolagus cuniculus)
- El31 (12 kDa, Protein from Oryctolagus cuniculus)
- L9 (21 kDa, Protein from Oryctolagus cuniculus)
- L38 (8 kDa, Protein from Oryctolagus cuniculus)
- L8 (26 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s26 (13 kDa, Protein from Oryctolagus cuniculus)
- Sec61beta (1 kDa, Protein from Oryctolagus cuniculus)
- L13a (23 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
- S10_plectin domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- El32 (15 kDa, Protein from Oryctolagus cuniculus)
- 28s ribosomal rna+blas (1 MDa, RNA from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein rack1 (34 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us19 (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l24-like protein (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein sa (32 kDa, Protein from Oryctolagus cuniculus)
- S14 (18 kDa, Protein from Oryctolagus cuniculus)
- Ul3 (46 kDa, Protein from Oryctolagus cuniculus)
- S19 (15 kDa, Protein from Oryctolagus cuniculus)
- Rps16 protein (17 kDa, Protein from Oryctolagus cuniculus)
- Low quality protein: 60s ribosomal protein l36a (16 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s25 (13 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (29 kDa, Protein from Oryctolagus cuniculus)
- El30 (12 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el39 (6 kDa, Protein from Oryctolagus cuniculus)
- Ul30 (29 kDa, Protein from Oryctolagus cuniculus)
- S4 (29 kDa, Protein from Oryctolagus cuniculus)
- S27a (7 kDa, Protein from Oryctolagus cuniculus)
- El21 (18 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el43 (10 kDa, Protein from Oryctolagus cuniculus)
- 5s ribosomal rna (38 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal_l18e/l15p domain-containing protein (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s5 (23 kDa, Protein from Oryctolagus cuniculus)
- Ul23 (17 kDa, Protein from Oryctolagus cuniculus)
- L18a (20 kDa, Protein from Oryctolagus cuniculus)
- L17 (17 kDa, Protein from Oryctolagus cuniculus)
- S17 (14 kDa, Protein from Oryctolagus cuniculus)
- Ul15 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l10 (24 kDa, Protein from Oryctolagus cuniculus)
- L12 (17 kDa, Protein from Oryctolagus cuniculus)
- 18s ribosomal rna (573 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal_s10 domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (26 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- S21 (9 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s30 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l34 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (34 kDa, Protein from Oryctolagus cuniculus)
- Ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l11 (20 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3 (31 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us13 (16 kDa, Protein from Oryctolagus cuniculus)
- Mrna (3 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s2 (27 kDa, Protein from Oryctolagus cuniculus)
- P-site trna (24 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (30 kDa, Protein from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- Mammalian pre-termination 80s ribosome with empty-a site bound by blasticidin s (3 MDa, Complex from Oryctolagus cuniculus)
Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7o81
Q-score: 0.447
Bhatt PR, Scaiola A, Loughran G, Leibundgut M, Kratzel A, Meurs R, Dreos R, O'Connor KM, McMillan A, Bode JW, Thiel V, Gatfield D, Atkins JF, Ban N
Science (2021) 372 pp. 1306-1313 [ DOI: doi:10.1126/science.abf3546 Pubmed: 34029205 ]
- 60s ribosomal protein l36 (12 kDa, Protein from Oryctolagus cuniculus)
- El24 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l11 (20 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- Rabbit 80s ribosome colliding in another ribosome stalled by the sars-cov-2 pseudoknot (Complex)
- El38 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l3 (46 kDa, Protein from Oryctolagus cuniculus)
- El33 (12 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es17 (15 kDa, Protein from Oryctolagus cuniculus)
- Ul22 (21 kDa, Protein from Oryctolagus cuniculus)
- 18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein l14 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el22 (14 kDa, Protein from Oryctolagus cuniculus)
- Ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s7 (47 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (11 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l23 (14 kDa, Protein from Oryctolagus cuniculus)
- P-site trna(pro) (24 kDa, RNA from Bos taurus)
- 40s ribosomal protein us19 (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27a (16 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l4 (46 kDa, Protein from Oryctolagus cuniculus)
- El32 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (34 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3 (31 kDa, Protein from Oryctolagus cuniculus)
- Mrna containing sars-cov-2 sequence (69 kDa, RNA from Severe acute respiratory syndrome coronavirus 2)
- Ribosomal protein s5 (22 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_l18_c domain-containing protein (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s28 (7 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us11 (16 kDa, Protein from Oryctolagus cuniculus)
- 5.8s rrna (50 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein el28 (15 kDa, Protein from Oryctolagus cuniculus)
- Us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l18 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (28 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es21 (9 kDa, Protein from Oryctolagus cuniculus)
- Rack1 (35 kDa, Protein from Oryctolagus cuniculus)
- Water (18 Da, Ligand)
- 60s ribosomal protein l40 (14 kDa, Protein from Oryctolagus cuniculus)
- Ul23 (17 kDa, Protein from Oryctolagus cuniculus)
- Rabbit 80s ribosome colliding in another ribosome (Complex from Bos taurus)
- A-site met-trna(met) (24 kDa, RNA from Bos taurus)
- 60s ribosomal protein l19 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el13 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein sa (32 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s25 (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l6 (33 kDa, Protein from Oryctolagus cuniculus)
- 28s rrna (1 MDa, RNA from Oryctolagus cuniculus)
- El31 (14 kDa, Protein from Oryctolagus cuniculus)
- El43 (10 kDa, Protein from Oryctolagus cuniculus)
- Replicase polyprotein 1ab (Complex from Severe acute respiratory syndrome coronavirus 2)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul2 (28 kDa, Protein from Oryctolagus cuniculus)
- Replicase polyprotein 1ab (121 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Ribosomal protein s27a (18 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s18 (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l12 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el8 (30 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (30 kDa, Protein from Oryctolagus cuniculus)
- Unknown atom or ion (Ligand)
- Ribosomal protein us5 (31 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l34 (13 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein es26 (13 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us10 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s9 (predicted) (22 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s11 (18 kDa, Protein from Oryctolagus cuniculus)
- 5s rrna (38 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein es4 (29 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es19 (16 kDa, Protein from Oryctolagus cuniculus)
- Sars-cov-2 pseudoknot (Complex from Severe acute respiratory syndrome coronavirus 2)
- Edf1 (16 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es10 (18 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (14 kDa, Protein from Oryctolagus cuniculus)
- Spermidine (145 Da, Ligand)
- Us9 (19 kDa, Protein from Oryctolagus cuniculus)
- El30 (12 kDa, Protein from Oryctolagus cuniculus)
- El21 (18 kDa, Protein from Oryctolagus cuniculus)
- El42 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l9 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul1 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l18a (20 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul30 (29 kDa, Protein from Oryctolagus cuniculus)
- Us14 (6 kDa, Protein from Oryctolagus cuniculus)
- Rabbit 80s ribosome colliding in another ribosome (Complex from Oryctolagus cuniculus)
- Ribosomal protein l13a (23 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s30 (14 kDa, Protein from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- El39 (6 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l10 (24 kDa, Protein from Oryctolagus cuniculus)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7a01
Q-score: 0.37
Abaeva IS, Vicens Q, Bochler A, Soufari H, Simonetti A, Pestova TV, Hashem Y, Hellen CUT
Cell Rep (2020) 33 pp. 108476-108476 [ Pubmed: 33296660 DOI: doi:10.1016/j.celrep.2020.108476 ]
- El42 (12 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l6 (22 kDa, Protein from Oryctolagus cuniculus)
- Internal ribosome entry site (48 kDa, RNA from Halastavi arva RNA virus)
- Ribosomal protein l22 (11 kDa, Protein from Oryctolagus cuniculus)
- El14 (13 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s4,40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul13 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el43 (10 kDa, Protein from Oryctolagus cuniculus)
- Ul30 (26 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27a (21 kDa, Protein from Oryctolagus cuniculus)
- Ul22 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l30 (10 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (15 kDa, Protein from Oryctolagus cuniculus)
- El34 (12 kDa, Protein from Oryctolagus cuniculus)
- Halastavi arva rna virus (Complex from Halastavi arva RNA virus)
- 60s ribosomal protein l5 (34 kDa, Protein from Oryctolagus cuniculus)
- Complex between 80s ribosome and halv igr ires (Complex from Oryctolagus cuniculus)
- Ribosomal protein l11 (19 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- 5.8s ribosomal rna (50 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (14 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (26 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s5 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (10 kDa, Protein from Oryctolagus cuniculus)
- El31 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l13 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (11 kDa, Protein from Oryctolagus cuniculus)
- Ul3 (45 kDa, Protein from Oryctolagus cuniculus)
- El32 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el19 (21 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l14 (16 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el40 (6 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s3 (25 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us13 (16 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us19 (15 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_l6e_n domain-containing protein (4 kDa, Protein from Oryctolagus cuniculus)
- 28s ribosomal rna (1 MDa, RNA from Oryctolagus cuniculus)
- 60s ribosomal protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- Complex between 80s ribosome and halv igr ires (Complex)
- 5s ribosomal rna (38 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein l24 (7 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (8 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es7 (21 kDa, Protein from Oryctolagus cuniculus)
- Ul15 (16 kDa, Protein from Oryctolagus cuniculus)
- Ul4 (41 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es28 (7 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- El21 (18 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein rack1 (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s11 (17 kDa, Protein from Oryctolagus cuniculus)
- 18s ribosomal rna (580 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein es30 (5 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el39 (6 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es21 (9 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (21 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el8 (27 kDa, Protein from Oryctolagus cuniculus)
- 40s_sa_c domain-containing protein (23 kDa, Protein from Oryctolagus cuniculus)
- S10_plectin domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es25 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s9 (predicted) (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (27 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- El33 (12 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_s10 domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es26 (11 kDa, Protein from Oryctolagus cuniculus)
- S5 drbm domain-containing protein (24 kDa, Protein from Oryctolagus cuniculus)
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 6zvk
Q-score: 0.421
Abaeva IS, Vicens Q, Bochler A, Soufari H, Simonetti A, Pestova TV, Hashem Y, Hellen CUT
Cell Rep (2020) 33 pp. 108476-108476 [ Pubmed: 33296660 DOI: doi:10.1016/j.celrep.2020.108476 ]
- El42 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l6 (22 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l22 (11 kDa, Protein from Oryctolagus cuniculus)
- Internal ribosome entry site (48 kDa, RNA from Halastavi arva RNA virus)
- El14 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul13 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el43 (10 kDa, Protein from Oryctolagus cuniculus)
- Ul30 (26 kDa, Protein from Oryctolagus cuniculus)
- Complex between 870s ribosome and halv igr ires (Complex)
- Ul22 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l30 (10 kDa, Protein from Oryctolagus cuniculus)
- El34 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l5 (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l11 (19 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- 5.8s ribosomal rna (50 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us9 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul2 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s5 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (10 kDa, Protein from Oryctolagus cuniculus)
- El31 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l13 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us11 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (11 kDa, Protein from Oryctolagus cuniculus)
- Ul3 (45 kDa, Protein from Oryctolagus cuniculus)
- El32 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es17 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el19 (21 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (11 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el38 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l14 (16 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el40 (6 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s3 (25 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us13 (16 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us19 (15 kDa, Protein from Oryctolagus cuniculus)
- 28s ribosomal rna (1 MDa, RNA from Oryctolagus cuniculus)
- Ribosomal_l6e_n domain-containing protein (4 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- 5s ribosomal rna (38 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein l24 (7 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es19 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (8 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es7 (21 kDa, Protein from Oryctolagus cuniculus)
- Ul15 (16 kDa, Protein from Oryctolagus cuniculus)
- Ul4 (41 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es28 (7 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- 18s ribosomal rna (602 kDa, RNA from Oryctolagus cuniculus)
- Halv igr ires (Complex from Halastavi arva RNA virus)
- Ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosome (Complex from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul6 (21 kDa, Protein from Oryctolagus cuniculus)
- El21 (18 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein rack1 (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s11 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es31 (8 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul23 (13 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es30 (5 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el39 (6 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es21 (9 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el8 (27 kDa, Protein from Oryctolagus cuniculus)
- 40s_sa_c domain-containing protein (23 kDa, Protein from Oryctolagus cuniculus)
- S10_plectin domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es25 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s9 (predicted) (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (27 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- El33 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el28 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_s10 domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es26 (11 kDa, Protein from Oryctolagus cuniculus)
- S5 drbm domain-containing protein (24 kDa, Protein from Oryctolagus cuniculus)
K.lactis 80S ribosome with p/PE tRNA and eIF5B
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6uz7
Q-score: 0.39
PNAS (2020) 117 pp. 1429-1437 [ DOI: doi:10.1073/pnas.1916436117 Pubmed: 31900355 ]
- Rpl28 (16 kDa, Protein from Kluyveromyces lactis)
- Klla0f05247p (14 kDa, Protein from Kluyveromyces lactis)
- 60s ribosomal protein l41 (3 kDa, Protein from Kluyveromyces lactis)
- Klla0d06941p (33 kDa, Protein from Kluyveromyces lactis)
- Klla0c18216p (8 kDa, Protein from Kluyveromyces lactis)
- Klla0e12277p (35 kDa, Protein from Kluyveromyces lactis)
- Klla0f23265p (108 kDa, Protein from Kluyveromyces lactis)
- Klla0b02937p (13 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s0 (28 kDa, Protein from Kluyveromyces lactis)
- 60s ribosomal protein l30 (11 kDa, Protein from Kluyveromyces lactis)
- 60s acidic ribosomal protein p0 (33 kDa, Protein from Kluyveromyces lactis)
- Klla0a10483p (17 kDa, Protein from Kluyveromyces lactis)
- 5.8s ribosomal rna (910 kDa, RNA from Kluyveromyces lactis)
- Klla0f09812p (27 kDa, Protein from Kluyveromyces lactis)
- Klla0e03455p (15 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s26 (13 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s12 (14 kDa, Protein from Kluyveromyces lactis)
- 60s ribosomal protein l3 (43 kDa, Protein from Kluyveromyces lactis)
- Klla0e00573p (28 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s8 (22 kDa, Protein from Kluyveromyces lactis)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l20 (20 kDa, Protein from Kluyveromyces lactis)
- Klla0d07405p (12 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s21 (9 kDa, Protein from Kluyveromyces lactis)
- Klla0f07843p (15 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s6 (26 kDa, Protein from Kluyveromyces lactis)
- Klla0f25542p (13 kDa, Protein from Kluyveromyces lactis)
- Klla0e23651p (18 kDa, Protein from Kluyveromyces lactis)
- Klla0d05181p (13 kDa, Protein from Kluyveromyces lactis)
- Klla0c08371p (14 kDa, Protein from Kluyveromyces lactis)
- Rna (121-mer) (38 kDa, RNA from Kluyveromyces lactis)
- Klla0e05941p (9 kDa, Protein from Kluyveromyces lactis)
- Klla0d16027p (27 kDa, Protein from Kluyveromyces lactis)
- Klla0e12453p (21 kDa, Protein from Kluyveromyces lactis)
- Klla0d03410p (27 kDa, Protein from Kluyveromyces lactis)
- Klla0e06997p (14 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s4 (29 kDa, Protein from Kluyveromyces lactis)
- Klla0f04499p (21 kDa, Protein from Kluyveromyces lactis)
- Klla0b13409p (15 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s7 (21 kDa, Protein from Kluyveromyces lactis)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- 60s ribosomal protein l29 (7 kDa, Protein from Kluyveromyces lactis)
- Klla0d05643p (25 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s29 (6 kDa, Protein from Kluyveromyces lactis)
- Klla0e06843p (14 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s30 (7 kDa, Protein from Kluyveromyces lactis)
- Kluyveromyces lactis 80s ribosome in complex with eif5b (Complex from Kluyveromyces lactis)
- 40s ribosomal protein s27 (8 kDa, Protein from Kluyveromyces lactis)
- 60s ribosomal protein l39 (6 kDa, Protein from Kluyveromyces lactis)
- 60s ribosomal protein l13 (22 kDa, Protein from Kluyveromyces lactis)
- Ribosomal protein (24 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s24 (15 kDa, Protein from Kluyveromyces lactis)
- 60s ribosomal protein l36 (11 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s16 (15 kDa, Protein from Kluyveromyces lactis)
- Ribosomal protein l15 (24 kDa, Protein from Kluyveromyces lactis)
- Klla0b07139p (39 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s25 (12 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s28 (7 kDa, Protein from Kluyveromyces lactis)
- Klla0b04686p (20 kDa, Protein from Kluyveromyces lactis)
- 60s ribosomal protein l24 (17 kDa, Protein from Kluyveromyces lactis)
- Klla0b01562p (17 kDa, Protein from Kluyveromyces lactis)
- Klla0d10659p (25 kDa, Protein from Kluyveromyces lactis)
- Klla0a07227p (20 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s1 (28 kDa, Protein from Kluyveromyces lactis)
- Klla0e23673p (21 kDa, Protein from Kluyveromyces lactis)
- Gdpcp (12 kDa, Protein from Kluyveromyces lactis)
- 60s ribosomal protein l44 (12 kDa, Protein from Kluyveromyces lactis)
- Klla0d08305p (26 kDa, Protein from Kluyveromyces lactis)
- Klla0f08261p (19 kDa, Protein from Kluyveromyces lactis)
- Ribosomal protein l37 (9 kDa, Protein from Kluyveromyces lactis)
- Klla0f18040p (16 kDa, Protein from Kluyveromyces lactis)
- 18s ribosomal rna (579 kDa, RNA from Kluyveromyces lactis)
- Klla0a06336p (20 kDa, Protein from Kluyveromyces lactis)
- Rna (76-mer) (24 kDa, RNA from Saccharomyces cerevisiae)
- Klla0a07194p (15 kDa, Protein from Kluyveromyces lactis)
- Ubiquitin-40s ribosomal protein s27a (17 kDa, Protein from Kluyveromyces lactis)
- 25s ribosomal rna (1 MDa, RNA from Kluyveromyces lactis)
- Ubiquitin fusion protein (14 kDa, Protein from Kluyveromyces lactis)
- Klla0b01474p (15 kDa, Protein from Kluyveromyces lactis)
- Klla0b05742p (14 kDa, Protein from Kluyveromyces lactis)
- Klla0b08173p (12 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s14 (14 kDa, Protein from Kluyveromyces lactis)
- 60s ribosomal protein l25 (15 kDa, Protein from Kluyveromyces lactis)
- 40s ribosomal protein s22 (14 kDa, Protein from Kluyveromyces lactis)
- Rps23 (16 kDa, Protein from Kluyveromyces lactis)
- Klla0f04675p (22 kDa, Protein from Kluyveromyces lactis)