Cryo-EM structure of 80S ribosome from mouse kidney
Resolution: 2.82 Å
EM Method: Single-particle
Fitted PDBs: 7cpu
Q-score: 0.58
Li H, Huo Y, He X, Yao L, Zhang H, Cui Y, Xiao H, Xie W, Zhang D, Wang Y, Zhang S, Tu H, Cheng Y, Guo Y, Cao X, Zhu Y, Jiang T, Guo X, Qin Y, Sha J
Nature (2022) 612 pp. 725-731 [ Pubmed: 36517592 DOI: doi:10.1038/s41586-022-05508-0 ]
- 40s ribosomal protein s26 (13 kDa, Protein from Mus musculus)
- 60s ribosomal protein l35a (12 kDa, Protein from Mus musculus)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Mus musculus)
- 60s ribosomal protein l32 (15 kDa, Protein from Mus musculus)
- 40s ribosomal protein s10 (18 kDa, Protein from Mus musculus)
- 60s ribosomal protein l23 (14 kDa, Protein from Mus musculus)
- 60s ribosomal protein l8 (28 kDa, Protein from Mus musculus)
- Mus musculus 18s ribosomal rna (603 kDa, RNA from Mus musculus)
- 60s ribosomal protein l15 (24 kDa, Protein from Mus musculus)
- Mus musculus 5s ribosomal rna (38 kDa, RNA from Mus musculus)
- Trna (24 kDa, RNA from Mus musculus)
- 40s ribosomal protein s19 (16 kDa, Protein from Mus musculus)
- 40s ribosomal protein s2 (31 kDa, Protein from Mus musculus)
- 60s ribosomal protein l9 (21 kDa, Protein from Mus musculus)
- Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Mus musculus)
- 40s ribosomal protein s7 (22 kDa, Protein from Mus musculus)
- Mus musculus 5.8s ribosomal rna (50 kDa, RNA from Mus musculus)
- 60s ribosomal protein l3 (46 kDa, Protein from Mus musculus)
- 60s ribosomal protein l18a (20 kDa, Protein from Mus musculus)
- 60s ribosomal protein l38 (8 kDa, Protein from Mus musculus)
- 60s ribosomal protein l13a (23 kDa, Protein from Mus musculus)
- 60s ribosomal protein l22 (14 kDa, Protein from Mus musculus)
- 40s ribosomal protein s5 (22 kDa, Protein from Mus musculus)
- Mus musculus 28s ribosomal rna (1 MDa, RNA from Mus musculus)
- 40s ribosomal protein s25 (13 kDa, Protein from Mus musculus)
- 60s ribosomal protein l30 (12 kDa, Protein from Mus musculus)
- 40s ribosomal protein s29 (6 kDa, Protein from Mus musculus)
- 60s ribosomal protein l24 (17 kDa, Protein from Mus musculus)
- 40s ribosomal protein s15a (14 kDa, Protein from Mus musculus)
- 60s ribosomal protein l21 (18 kDa, Protein from Mus musculus)
- 60s ribosomal protein l31 (14 kDa, Protein from Mus musculus)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein sa (32 kDa, Protein from Mus musculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Mus musculus)
- 40s ribosomal protein s21 (9 kDa, Protein from Mus musculus)
- 60s ribosomal protein l29 (17 kDa, Protein from Mus musculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Mus musculus)
- 60s ribosomal protein l18 (21 kDa, Protein from Mus musculus)
- 40s ribosomal protein s3a (29 kDa, Protein from Mus musculus)
- 60s ribosomal protein l28 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l13 (24 kDa, Protein from Mus musculus)
- Mus musculus 80s ribosome from kidney (Complex from Mus musculus)
- 40s ribosomal protein s17 (15 kDa, Protein from Mus musculus)
- Ribosomal protein l39 (6 kDa, Protein from Mus musculus)
- 60s ribosomal protein l23a (17 kDa, Protein from Mus musculus)
- 40s ribosomal protein s13 (17 kDa, Protein from Mus musculus)
- Water (18 Da, Ligand)
- 40s ribosomal protein s15 (17 kDa, Protein from Mus musculus)
- 40s ribosomal protein s23 (15 kDa, Protein from Mus musculus)
- 40s ribosomal protein s24 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l34 (13 kDa, Protein from Mus musculus)
- 60s ribosomal protein l14 (23 kDa, Protein from Mus musculus)
- 60s ribosomal protein l27a (16 kDa, Protein from Mus musculus)
- 60s ribosomal protein l37a (10 kDa, Protein from Mus musculus)
- 60s ribosomal protein l11 (20 kDa, Protein from Mus musculus)
- 60s ribosomal protein l17 (21 kDa, Protein from Mus musculus)
- 60s ribosomal protein l35 (14 kDa, Protein from Mus musculus)
- 40s ribosomal protein s30 (14 kDa, Protein from Mus musculus)
- 60s ribosomal protein l36a (12 kDa, Protein from Mus musculus)
- 40s ribosomal protein s11 (18 kDa, Protein from Mus musculus)
- 60s ribosomal protein l19 (23 kDa, Protein from Mus musculus)
- 60s ribosomal protein l6 (33 kDa, Protein from Mus musculus)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s28 (7 kDa, Protein from Mus musculus)
- 40s ribosomal protein s3 (26 kDa, Protein from Mus musculus)
- 40s ribosomal protein s6 (28 kDa, Protein from Mus musculus)
- 60s ribosomal protein l5 (34 kDa, Protein from Mus musculus)
- 60s ribosomal protein l37 (11 kDa, Protein from Mus musculus)
- 40s ribosomal protein s16 (16 kDa, Protein from Mus musculus)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Mus musculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Mus musculus)
- 60s ribosomal protein l4 (47 kDa, Protein from Mus musculus)
- 40s ribosomal protein s14 (16 kDa, Protein from Mus musculus)
- 40s ribosomal protein s18 (17 kDa, Protein from Mus musculus)
- 40s ribosomal protein s20 (13 kDa, Protein from Mus musculus)
- 60s ribosomal protein l36 (12 kDa, Protein from Mus musculus)
- 60s ribosomal protein l26 (17 kDa, Protein from Mus musculus)
- 60s ribosomal protein l10 (24 kDa, Protein from Mus musculus)
- 40s ribosomal protein s9 (22 kDa, Protein from Mus musculus)
- 60s ribosomal protein l7 (31 kDa, Protein from Mus musculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l7a (30 kDa, Protein from Mus musculus)
Cryo-EM structure of 80S ribosome from mouse testis
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 7cpv
Q-score: 0.534
Li H, Huo Y, He X, Yao L, Zhang H, Cui Y, Xiao H, Xie W, Zhang D, Wang Y, Zhang S, Tu H, Cheng Y, Guo Y, Cao X, Zhu Y, Jiang T, Guo X, Qin Y, Sha J
Nature (2022) 612 pp. 725-731 [ Pubmed: 36517592 DOI: doi:10.1038/s41586-022-05508-0 ]
- 40s ribosomal protein s26 (13 kDa, Protein from Mus musculus)
- 60s ribosomal protein l35a (12 kDa, Protein from Mus musculus)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Mus musculus)
- 60s ribosomal protein l32 (15 kDa, Protein from Mus musculus)
- 40s ribosomal protein s10 (18 kDa, Protein from Mus musculus)
- 60s ribosomal protein l23 (14 kDa, Protein from Mus musculus)
- 60s ribosomal protein l8 (28 kDa, Protein from Mus musculus)
- Mus musculus 18s ribosomal rna (603 kDa, RNA from Mus musculus)
- 60s ribosomal protein l15 (24 kDa, Protein from Mus musculus)
- Mus musculus 5s ribosomal rna (38 kDa, RNA from Mus musculus)
- 40s ribosomal protein s19 (16 kDa, Protein from Mus musculus)
- 40s ribosomal protein s2 (31 kDa, Protein from Mus musculus)
- 60s ribosomal protein l9 (21 kDa, Protein from Mus musculus)
- Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Mus musculus)
- 40s ribosomal protein s7 (22 kDa, Protein from Mus musculus)
- Mus musculus 5.8s ribosomal rna (50 kDa, RNA from Mus musculus)
- 60s ribosomal protein l3 (46 kDa, Protein from Mus musculus)
- 60s ribosomal protein l18a (20 kDa, Protein from Mus musculus)
- 60s ribosomal protein l38 (8 kDa, Protein from Mus musculus)
- 60s ribosomal protein l13a (23 kDa, Protein from Mus musculus)
- 60s ribosomal protein l22 (14 kDa, Protein from Mus musculus)
- 40s ribosomal protein s5 (22 kDa, Protein from Mus musculus)
- Mus musculus 80s ribosome from testis (Complex from Mus musculus)
- Mus musculus 28s ribosomal rna (1 MDa, RNA from Mus musculus)
- 40s ribosomal protein s25 (13 kDa, Protein from Mus musculus)
- 60s ribosomal protein l30 (12 kDa, Protein from Mus musculus)
- 60s ribosomal protein l10-like (24 kDa, Protein from Mus musculus)
- 60s ribosomal protein l24 (17 kDa, Protein from Mus musculus)
- 40s ribosomal protein s29 (6 kDa, Protein from Mus musculus)
- 40s ribosomal protein s15a (14 kDa, Protein from Mus musculus)
- 60s ribosomal protein l21 (18 kDa, Protein from Mus musculus)
- 60s ribosomal protein l31 (14 kDa, Protein from Mus musculus)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein sa (32 kDa, Protein from Mus musculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Mus musculus)
- 40s ribosomal protein s21 (9 kDa, Protein from Mus musculus)
- 60s ribosomal protein l29 (17 kDa, Protein from Mus musculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Mus musculus)
- 60s ribosomal protein l18 (21 kDa, Protein from Mus musculus)
- Met-trna (24 kDa, RNA from Mus musculus)
- 40s ribosomal protein s3a (29 kDa, Protein from Mus musculus)
- 60s ribosomal protein l28 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l13 (24 kDa, Protein from Mus musculus)
- 40s ribosomal protein s17 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l23a (17 kDa, Protein from Mus musculus)
- Ribosomal protein l39-like (6 kDa, Protein from Mus musculus)
- 40s ribosomal protein s13 (17 kDa, Protein from Mus musculus)
- Water (18 Da, Ligand)
- 40s ribosomal protein s15 (17 kDa, Protein from Mus musculus)
- 40s ribosomal protein s23 (15 kDa, Protein from Mus musculus)
- 40s ribosomal protein s24 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l34 (13 kDa, Protein from Mus musculus)
- 60s ribosomal protein l14 (23 kDa, Protein from Mus musculus)
- 60s ribosomal protein l27a (16 kDa, Protein from Mus musculus)
- 60s ribosomal protein l37a (10 kDa, Protein from Mus musculus)
- 60s ribosomal protein l11 (20 kDa, Protein from Mus musculus)
- 60s ribosomal protein l17 (21 kDa, Protein from Mus musculus)
- 60s ribosomal protein l35 (14 kDa, Protein from Mus musculus)
- 40s ribosomal protein s30 (14 kDa, Protein from Mus musculus)
- 60s ribosomal protein l36a (12 kDa, Protein from Mus musculus)
- 40s ribosomal protein s11 (18 kDa, Protein from Mus musculus)
- 60s ribosomal protein l19 (23 kDa, Protein from Mus musculus)
- 60s ribosomal protein l6 (33 kDa, Protein from Mus musculus)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s28 (7 kDa, Protein from Mus musculus)
- 40s ribosomal protein s3 (26 kDa, Protein from Mus musculus)
- 40s ribosomal protein s6 (28 kDa, Protein from Mus musculus)
- 60s ribosomal protein l5 (34 kDa, Protein from Mus musculus)
- 60s ribosomal protein l37 (11 kDa, Protein from Mus musculus)
- 40s ribosomal protein s16 (16 kDa, Protein from Mus musculus)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Mus musculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Mus musculus)
- 60s ribosomal protein l4 (47 kDa, Protein from Mus musculus)
- 40s ribosomal protein s14 (16 kDa, Protein from Mus musculus)
- 40s ribosomal protein s18 (17 kDa, Protein from Mus musculus)
- 40s ribosomal protein s20 (13 kDa, Protein from Mus musculus)
- 60s ribosomal protein l36 (12 kDa, Protein from Mus musculus)
- 60s ribosomal protein l26 (17 kDa, Protein from Mus musculus)
- 40s ribosomal protein s9 (22 kDa, Protein from Mus musculus)
- 60s ribosomal protein l7 (31 kDa, Protein from Mus musculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l7a (30 kDa, Protein from Mus musculus)