Cryo-EM structure of the ribosome from Encephalitozoon cuniculi
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7qep
Q-score: 0.577
Nicholson D, Salamina M, Panek J, Helena-Bueno K, Brown CR, Hirt RP, Ranson NA, Melnikov SV
Nat Commun (2022) 13 pp. 591- [ DOI: doi:10.1038/s41467-022-28281-0 ]
- 60s ribosomal protein l22 (12 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l35a (l33) (12 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l18 (22 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l5 (32 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- Large subunit (Complex from Encephalitozoon cuniculi)
- 60s ribosomal protein l39 (6 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l7 (27 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l29 (6 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- Ribosome from encephalitozoon cuniculi (Complex from Encephalitozoon cuniculi)
- 40s ribosomal protein s27 (9 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- Ribosomal protein l15 (23 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- Guanine nucleotide binding protein beta subunit (36 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 18s ribosomal rna (422 kDa, RNA from Encephalitozoon cuniculi GB-M1)
- Similarity to 60s ribosomal protein l24 (11 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s19 (15 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s10 (11 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l4 (37 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- Spermidine (145 Da, Ligand)
- 40s ribosomal protein s23 (15 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l21 (18 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- Ribosomal protein s15 (16 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l35-1 (14 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l8 (25 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l31 (13 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- Ecu06_1215 protein (12 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l26 (16 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l36 (10 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s12 (14 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l9 (20 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s4 (30 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l6 (19 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l17 (20 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s29 (7 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- Uncharacterized protein ecu01_0250 (19 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l27a (17 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s3 (24 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l27 (14 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l13 (18 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s28 (7 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l1 (24 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l20 (21 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s15a (s22 in yeast) (14 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s24 (15 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l7a (23 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s7 (19 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l37a (l43) (9 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l23 (16 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s0 (27 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- Ecu11_0225 protein (7 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l23a (11 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s20 (14 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- Ubiquitin/ l40 ribosomal protein fusion (14 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s1 (26 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l13a (l16) (22 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s9 (20 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s14 (14 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 5.8s-23s ribosomal rna (807 kDa, RNA from Encephalitozoon cuniculi GB-M1)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s13 (16 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l37 (10 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- Small subunit (Complex from Encephalitozoon cuniculi)
- 40s ribosomal protein s18 (17 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l3 (42 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s26 (11 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l44 (12 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- Ecu06_1135 protein (9 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l32 (16 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s25 (12 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 5s ribosomal rna (38 kDa, RNA from Encephalitozoon cuniculi GB-M1)
- Adenosine monophosphate (347 Da, Ligand)
- Similarity to monoubiquitin/carboxy-extension protein fusion (17 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l30 (11 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s5 (20 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s11 (17 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l11 (19 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l10 (25 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l34 (12 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s17 (14 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s2 (26 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 60s ribosomal protein l19 (20 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s8 (19 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s16 (16 kDa, Protein from Encephalitozoon cuniculi GB-M1)
- 40s ribosomal protein s6 (25 kDa, Protein from Encephalitozoon cuniculi GB-M1)