Resolution: 4.29 Å
EM Method: Single-particle
Fitted PDBs: 8hpl
Q-score: 0.292
Liang J, Yang X, Hu T, Gao Y, Yang Q, Yang H, Peng W, Zhou X, Guddat LW, Zhang B, Rao Z, Liu F
Structure (2023) 31 pp. 1158-1165.e3 [ DOI: doi:10.1016/j.str.2023.07.014 Pubmed: 37619560 ]
- Abc transporter, permease protein sugb (29 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Abc transporter, atp-binding protein sugc (43 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Bacterial extracellular solute-binding protein (50 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Abc sugar transporter, permease component (32 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Trehalose-specific importer lpqy-sugabc complex (Complex from Mycolicibacterium smegmatis MC2 155)
Resolution: 3.82 Å
EM Method: Single-particle
Fitted PDBs: 8hpm
Q-score: 0.347
Liang J, Yang X, Hu T, Gao Y, Yang Q, Yang H, Peng W, Zhou X, Guddat LW, Zhang B, Rao Z, Liu F
Structure (2023) 31 pp. 1158-1165.e3 [ DOI: doi:10.1016/j.str.2023.07.014 Pubmed: 37619560 ]
- Abc transporter, permease protein sugb (29 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Abc transporter, atp-binding protein sugc (43 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Bacterial extracellular solute-binding protein (50 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Abc sugar transporter, permease component (32 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Trehalose-specific importer lpqy-sugabc complex (Complex from Mycolicibacterium smegmatis MC2 155)
Resolution: 4.55 Å
EM Method: Single-particle
Fitted PDBs: 8hpn
Q-score: 0.249
Liang J, Yang X, Hu T, Gao Y, Yang Q, Yang H, Peng W, Zhou X, Guddat LW, Zhang B, Rao Z, Liu F
Structure (2023) 31 pp. 1158-1165.e3 [ DOI: doi:10.1016/j.str.2023.07.014 Pubmed: 37619560 ]
- Abc transporter, permease protein sugb (29 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Abc transporter, atp-binding protein sugc (43 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Bacterial extracellular solute-binding protein (50 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Abc sugar transporter, permease component (32 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Trehalose-specific importer lpqy-sugabc complex (Complex from Mycolicibacterium smegmatis MC2 155)
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 8hpr
Q-score: 0.369
Liang J, Yang X, Hu T, Gao Y, Yang Q, Yang H, Peng W, Zhou X, Guddat LW, Zhang B, Rao Z, Liu F
Structure (2023) 31 pp. 1158-1165.e3 [ DOI: doi:10.1016/j.str.2023.07.014 Pubmed: 37619560 ]
- Abc transporter, permease protein sugb (29 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Abc transporter, atp-binding protein sugc (43 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Bacterial extracellular solute-binding protein (50 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Abc sugar transporter, permease component (32 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Trehalose-specific importer lpqy-sugabc complex (Complex from Mycolicibacterium smegmatis MC2 155)
Resolution: 3.51 Å
EM Method: Single-particle
Fitted PDBs: 8hps
Q-score: 0.412
Liang J, Yang X, Hu T, Gao Y, Yang Q, Yang H, Peng W, Zhou X, Guddat LW, Zhang B, Rao Z, Liu F
Structure (2023) 31 pp. 1158-1165.e3 [ DOI: doi:10.1016/j.str.2023.07.014 Pubmed: 37619560 ]
- Abc transporter, permease protein sugb (29 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Abc transporter, atp-binding protein sugc (43 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Bacterial extracellular solute-binding protein (50 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Abc sugar transporter, permease component (32 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Trehalose-specific importer lpqy-sugabc complex (Complex from Mycolicibacterium smegmatis MC2 155)
ABC transporter NosDFY, nucleotide-free in lipid nanodisc
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7o13
Q-score: 0.403
Muller C, Zhang L, Zipfel S, Topitsch A, Lutz M, Eckert J, Prasser B, Chami M, Lu W, Du J, Einsle O
Nature (2022) 608 pp. 626-631 [ DOI: doi:10.1038/s41586-022-05015-2 Pubmed: 35896743 ]
- Abc transporter nosfy in complex with accessory periplasmic protein nosd (Complex from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Probable abc transporter atp-binding protein nosf (33 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Probable abc transporter binding protein nosd (48 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Magnesium ion (24 Da, Ligand)
- Probable abc transporter permease protein nosy (29 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Water (18 Da, Ligand)
CryoEM structure of the ABC transporter NosDFY complexed with nitrous oxide reductase NosZ
Resolution: 3.78 Å
EM Method: Single-particle
Fitted PDBs: 7qba
Q-score: 0.45
Muller C, Zhang L, Zipfel S, Topitsch A, Lutz M, Eckert J, Prasser B, Chami M, Lu W, Du J, Einsle O
Nature (2022) 608 pp. 626-631 [ DOI: doi:10.1038/s41586-022-05015-2 Pubmed: 35896743 ]
- Nitrous-oxide reductase (71 kDa, Protein from Pseudomonas stutzeri)
- Calcium ion (40 Da, Ligand)
- Probable abc transporter atp-binding protein nosf (34 kDa, Protein from Pseudomonas stutzeri)
- Probable abc transporter binding protein nosd (48 kDa, Protein from Pseudomonas stutzeri)
- Probable abc transporter permease protein nosy (29 kDa, Protein from Pseudomonas stutzeri)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Heteroheptamer complex of noszdfy (Complex from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
ABC Transporter complex NosDFYL, R-domain 1
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7osf
Q-score: 0.431
Muller C, Zhang L, Zipfel S, Topitsch A, Lutz M, Eckert J, Prasser B, Chami M, Lu W, Du J, Einsle O
Nature (2022) 608 pp. 626-631 [ DOI: doi:10.1038/s41586-022-05015-2 Pubmed: 35896743 ]
- Zinc ion (65 Da, Ligand)
- Abc transporter nosfy in complex with accessory periplasmic protein nosd and cu chaperone nosl (Complex from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Probable abc transporter atp-binding protein nosf (33 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Probable abc transporter binding protein nosd (48 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Copper-binding lipoprotein nosl (20 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Magnesium ion (24 Da, Ligand)
- Copper (ii) ion (63 Da, Ligand)
- Probable abc transporter permease protein nosy (29 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Water (18 Da, Ligand)
ABC Transporter complex NosDFYL, consensus refinement
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7osg
Q-score: 0.457
Muller C, Zhang L, Zipfel S, Topitsch A, Lutz M, Eckert J, Prasser B, Chami M, Lu W, Du J, Einsle O
Nature (2022) 608 pp. 626-631 [ DOI: doi:10.1038/s41586-022-05015-2 Pubmed: 35896743 ]
- Zinc ion (65 Da, Ligand)
- Abc transporter nosfy in complex with accessory periplasmic protein nosd and cu chaperone nosl (Complex from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Probable abc transporter atp-binding protein nosf (33 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Probable abc transporter binding protein nosd (48 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Copper-binding lipoprotein nosl (20 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Magnesium ion (24 Da, Ligand)
- Copper (ii) ion (63 Da, Ligand)
- Probable abc transporter permease protein nosy (29 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Water (18 Da, Ligand)
ABC Transporter complex NosDFYL, R-domain 2
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7osh
Q-score: 0.438
Muller C, Zhang L, Zipfel S, Topitsch A, Lutz M, Eckert J, Prasser B, Chami M, Lu W, Du J, Einsle O
Nature (2022) 608 pp. 626-631 [ DOI: doi:10.1038/s41586-022-05015-2 Pubmed: 35896743 ]
- Zinc ion (65 Da, Ligand)
- Abc transporter nosfy in complex with accessory periplasmic protein nosd and cu chaperone nosl (Complex from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Probable abc transporter atp-binding protein nosf (33 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Probable abc transporter binding protein nosd (48 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Copper-binding lipoprotein nosl (20 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Magnesium ion (24 Da, Ligand)
- Copper (ii) ion (63 Da, Ligand)
- Probable abc transporter permease protein nosy (29 kDa, Protein from Pseudomonas stutzeri ATCC 14405 = CCUG 16156)
- Water (18 Da, Ligand)