ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 4
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6po1
Q-score: 0.364
Fei X, Bell TA, Jenni S, Stinson BM, Baker TA, Harrison SC, Sauer RT
eLife (2020) 9 [ DOI: doi:10.7554/eLife.52774 Pubmed: 32108573 ]
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Substrate peptide (1 kDa, Protein from Escherichia coli)
- Clpx-clpp-substrate-atprs (Complex from Escherichia coli)
- Atp-dependent clp protease proteolytic subunit (23 kDa, Protein from Escherichia coli)
- Atp-dependent clp protease atp-binding subunit clpx (39 kDa, Protein from Escherichia coli)
- Adenosine-5'-diphosphate (427 Da, Ligand)
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 3
Resolution: 4.28 Å
EM Method: Single-particle
Fitted PDBs: 6po3
Q-score: 0.345
Fei X, Bell TA, Jenni S, Stinson BM, Baker TA, Harrison SC, Sauer RT
eLife (2020) 9 [ DOI: doi:10.7554/eLife.52774 Pubmed: 32108573 ]
- Atp-dependent clp protease proteolytic subunit (23 kDa, Protein from Escherichia coli)
- Atp-dependent clp protease atp-binding subunit clpx (39 kDa, Protein from Escherichia coli)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Clpx-clpp-substrate-atprs (Complex from Escherichia coli)
- Substrate peptide (666 Da, Protein from Escherichia coli)
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 2
Resolution: 4.05 Å
EM Method: Single-particle
Fitted PDBs: 6pod
Q-score: 0.368
Fei X, Bell TA, Jenni S, Stinson BM, Baker TA, Harrison SC, Sauer RT
eLife (2020) 9 [ DOI: doi:10.7554/eLife.52774 Pubmed: 32108573 ]
- Atp-dependent clp protease proteolytic subunit (23 kDa, Protein from Escherichia coli)
- Substrate peptide (1 kDa, Protein from Escherichia coli)
- Atp-dependent clp protease atp-binding subunit clpx (39 kDa, Protein from Escherichia coli)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Clpx-clpp-substrate-atprs (Complex from Escherichia coli)
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 1
Resolution: 4.12 Å
EM Method: Single-particle
Fitted PDBs: 6pos
Q-score: 0.345
Fei X, Bell TA, Jenni S, Stinson BM, Baker TA, Harrison SC, Sauer RT
eLife (2020) 9 [ DOI: doi:10.7554/eLife.52774 Pubmed: 32108573 ]
- Atp-dependent clp protease proteolytic subunit (23 kDa, Protein from Escherichia coli)
- Atp-dependent clp protease atp-binding subunit clpx (39 kDa, Protein from Escherichia coli)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Substrate peptide (770 Da, Protein from Escherichia coli)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Clpx-clpp-substrate-atprs (Complex from Escherichia coli)
ClpP and ClpX IGF loop in ClpX-ClpP complex with D7 symmetry
Resolution: 3.19 Å
EM Method: Single-particle
Fitted PDBs: 6ppe
Q-score: 0.527
Fei X, Bell TA, Jenni S, Stinson BM, Baker TA, Harrison SC, Sauer RT
eLife (2020) 9 [ DOI: doi:10.7554/eLife.52774 Pubmed: 32108573 ]
- Atp-dependent clp protease atp-binding subunit clpx (39 kDa, Protein from Escherichia coli)
- Clpx-clpp-substrate-atprs (Complex from Escherichia coli)
- Water (18 Da, Ligand)
- Atp-dependent clp protease proteolytic subunit (21 kDa, Protein from Escherichia coli)