Bottom cylinder of high-resolution phycobilisome quenched by OCP (local refinement)
Resolution: 2.0 Å
EM Method: Single-particle
Fitted PDBs: 8to2
Q-score: 0.592
Sauer PV, Cupellini L, Sutter M, Bondanza M, Dominguez Martin MA, Kirst H, Bina D, Koh AF, Kotecha A, Greber BJ, Nogales E, Polivka T, Mennucci B, Kerfeld CA
Sci Adv (2024) 10 pp. eadk7535-eadk7535 [ Pubmed: 38578996 DOI: doi:10.1126/sciadv.adk7535 ]
- Allophycocyanin subunit beta-18 (18 kDa, Protein from Synechocystis sp. PCC 6803)
- Allophycocyanin subunit alpha-b (17 kDa, Protein from Synechocystis sp. PCC 6803)
- Allophycocyanin alpha chain (17 kDa, Protein from Synechocystis sp. PCC 6803)
- Allophycocyanin beta chain (17 kDa, Protein from Synechocystis sp. PCC 6803)
- Phycobilisome 7.8 kda linker polypeptide, allophycocyanin-associated, core (7 kDa, Protein from Synechocystis sp. PCC 6803)
- Translation initiation factor if-2 (12 kDa, Protein from Synechocystis sp. PCC 6803)
- Orange carotenoid-binding protein (34 kDa, Protein from Synechocystis sp. PCC 6803)
- Phycobilisome rod-core linker polypeptide cpcg (28 kDa, Protein from Synechocystis sp. PCC 6803)
- Phycobiliprotein apce (100 kDa, Protein from Synechocystis sp. PCC 6803)
- Beta,beta-carotene-4,4'-dione (564 Da, Ligand)
- Phycocyanobilin (588 Da, Ligand)
- Complex of phycobilisome from synechocystis pcc 6803 bound to ocp (Complex from Synechocystis sp. (strain PCC 6803 / Kazusa))
Top cylinder bound to OCP from high-resolution phycobilisome quenched by OCP (local refinement)
Resolution: 2.1 Å
EM Method: Single-particle
Fitted PDBs: 8tpj
Q-score: 0.675
Sauer PV, Cupellini L, Sutter M, Bondanza M, Dominguez Martin MA, Kirst H, Bina D, Koh AF, Kotecha A, Greber BJ, Nogales E, Polivka T, Mennucci B, Kerfeld CA
Sci Adv (2024) 10 pp. eadk7535-eadk7535 [ Pubmed: 38578996 DOI: doi:10.1126/sciadv.adk7535 ]
- Allophycocyanin alpha chain (17 kDa, Protein from Synechocystis sp. PCC 6803)
- Allophycocyanin beta chain (17 kDa, Protein from Synechocystis sp. PCC 6803)
- Phycobilisome 7.8 kda linker polypeptide, allophycocyanin-associated, core (7 kDa, Protein from Synechocystis sp. PCC 6803)
- Beta,beta-carotene-4,4'-dione (564 Da, Ligand)
- Orange carotenoid-binding protein (34 kDa, Protein from Synechocystis sp. PCC 6803)
- Phycobiliprotein apce (100 kDa, Protein from Synechocystis sp. PCC 6803)
- Phycobilisome bound to ocp (Complex from Synechocystis sp. PCC 6803)
- Phycocyanobilin (588 Da, Ligand)
- Water (18 Da, Ligand)
- Phycobilisome rod-core linker polypeptide cpcg (28 kDa, Protein from Synechocystis sp. PCC 6803)
B-cylinder of Synechocystis PCC 6803 Phycobilisome, complex with OCP - local refinement
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7scb
Q-score: 0.497
Dominguez-Martin MA, Sauer PV, Kirst H, Sutter M, Bina D, Greber BJ, Nogales E, Polivka T, Kerfeld CA
Nature (2022) 609 pp. 835-845 [ Pubmed: 36045294 DOI: doi:10.1038/s41586-022-05156-4 ]
- Allophycocyanin alpha chain (17 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Allophycocyanin subunit alpha-b (17 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Orange carotenoid-binding protein (34 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Beta,beta-carotene-4,4'-dione (564 Da, Ligand)
- Complex of phycobilisome from synechocystis pcc 6803 with ocp (Complex from Synechocystis sp. (strain PCC 6803 / Kazusa))
- Allophycocyanin subunit beta-18 (18 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Phycobiliprotein apce (100 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Allophycocyanin beta chain (17 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Phycobilisome 7.8 kda linker polypeptide, allophycocyanin-associated, core (7 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Phycobilisome rod-core linker polypeptide cpcg (28 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Phycocyanobilin (588 Da, Ligand)
- Sll1873 protein (12 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
T-cylinder of Synechocystis PCC 6803 Phycobilisome, complex with OCP - local refinement
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7scc
Q-score: 0.458
Dominguez-Martin MA, Sauer PV, Kirst H, Sutter M, Bina D, Greber BJ, Nogales E, Polivka T, Kerfeld CA
Nature (2022) 609 pp. 835-845 [ Pubmed: 36045294 DOI: doi:10.1038/s41586-022-05156-4 ]
- Allophycocyanin alpha chain (17 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Orange carotenoid-binding protein (34 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Beta,beta-carotene-4,4'-dione (564 Da, Ligand)
- Complex of phycobilisome from synechocystis pcc 6803 with ocp (Complex from Synechocystis sp. (strain PCC 6803 / Kazusa))
- Phycobiliprotein apce (100 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Allophycocyanin beta chain (17 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Phycobilisome 7.8 kda linker polypeptide, allophycocyanin-associated, core (7 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Phycobilisome rod-core linker polypeptide cpcg (28 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
- Phycocyanobilin (588 Da, Ligand)