Microtubule-associated Kif5B IAK tail mutant bound to ADP
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9gnq
Q-score: 0.54
Atherton J, Chegkazi MS, Peirano E, Pozzer LS, Foran T, Steiner RA
bioRxiv (2024) [ DOI: doi:10.1101/2024.11.11.622991 ]
- Beta tubulin (Complex from Sus scrofa)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Kif5bmonexxx bound with adp (Complex from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Taxol (853 Da, Ligand)
- Kinesin-1 heavy chain (44 kDa, Protein from Homo sapiens)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
- 13pf microtubule bound to kif5bmonexxx in the presence of adp (246 MDa, Complex)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Alpha-tubulin (Complex from Sus scrofa)
ATAT-2 bound MEC-12/MEC-7 microtubule
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8y9f
Q-score: 0.446
Luo J, Lam WH, Yu D, Chao VC, Zopfi MN, Khoo CJ, Zhao C, Yan S, Liu Z, Li XD, Zheng C, Zhai Y, Ti SC
Nat Struct Mol Biol (2024) [ DOI: doi:10.1038/s41594-024-01406-3 Pubmed: 39496813 ]
- Tubulin alpha-3 chain (50 kDa, Protein from Caenorhabditis elegans)
- Tubulin beta-1 chain (49 kDa, Protein from Caenorhabditis elegans)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Mec-12/mec-7 microtubule in complex with full-length atat-2 (Complex from Caenorhabditis elegans)
- Alpha-tubulin n-acetyltransferase 2 (30 kDa, Protein from Caenorhabditis elegans)
- Tubulin alpha-3 chain (50 kDa, Protein from Caenorhabditis elegans)
ATAT-2 bound MEC-12/MEC-7 microtubule without acetyl-CoA
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8yaj
Q-score: 0.453
Luo J, Lam WH, Yu D, Chao VC, Zopfi MN, Khoo CJ, Zhao C, Yan S, Liu Z, Li XD, Zheng C, Zhai Y, Ti SC
Nat Struct Mol Biol (2024) [ DOI: doi:10.1038/s41594-024-01406-3 Pubmed: 39496813 ]
- Tubulin beta-1 chain (49 kDa, Protein from Caenorhabditis elegans)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Alpha tat2 bound mec-12/mec-7 microtubules withour acetyl-coa (Complex from Caenorhabditis elegans)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Alpha-tubulin n-acetyltransferase 2 (30 kDa, Protein from Caenorhabditis elegans)
- Tubulin alpha-3 chain (50 kDa, Protein from Caenorhabditis elegans)
- Piperazine-n,n'-bis(2-ethanesulfonic acid) (302 Da, Ligand)
ATAT-2 bound K40Q MEC-12/MEC-7 microtubule
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8yal
Q-score: 0.477
Luo J, Lam WH, Yu D, Chao VC, Zopfi MN, Khoo CJ, Zhao C, Yan S, Liu Z, Li XD, Zheng C, Zhai Y, Ti SC
Nat Struct Mol Biol (2024) [ DOI: doi:10.1038/s41594-024-01406-3 Pubmed: 39496813 ]
- Tubulin alpha-3 chain (50 kDa, Protein from Caenorhabditis elegans)
- Tubulin beta-1 chain (49 kDa, Protein from Caenorhabditis elegans)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- K40q mec-12/mec-7 microtubule complexed with alpha tat2 (Complex from Caenorhabditis elegans)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Acetyl coenzyme *a (809 Da, Ligand)
- Alpha-tubulin n-acetyltransferase 2 (30 kDa, Protein from Caenorhabditis elegans)
ATAT-2 bound K40R MEC-12/MEC-7 microtubule
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8yar
Q-score: 0.363
Luo J, Lam WH, Yu D, Chao VC, Zopfi MN, Khoo CJ, Zhao C, Yan S, Liu Z, Li XD, Zheng C, Zhai Y, Ti SC
Nat Struct Mol Biol (2024) [ DOI: doi:10.1038/s41594-024-01406-3 Pubmed: 39496813 ]
- Tubulin beta-1 chain (49 kDa, Protein from Caenorhabditis elegans)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- K40r mec-12/mec-7 microtubule in complex with luminal atat-2 (Complex from Caenorhabditis elegans)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Acetyl coenzyme *a (809 Da, Ligand)
- Alpha-tubulin n-acetyltransferase 2 (30 kDa, Protein from Caenorhabditis elegans)
- Tubulin alpha-3 chain (50 kDa, Protein from Caenorhabditis elegans)
HURP (428-534)-alpha-tubulin-beta-tubulin complex
Resolution: 3.54 Å
EM Method: Single-particle
Fitted PDBs: 8x9p
Q-score: 0.352
To Be Published
- Disks large-associated protein 5,green fluorescent protein (76 kDa, Protein from Homo sapiens)
- Tubulin beta chain (47 kDa, Protein from Bos taurus)
- Hurp (428-534)-alpha-tubulin-beta-tubulin complex (Complex from Homo sapiens)
- Tubulin alpha chain (48 kDa, Protein from Bos taurus)
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 8va2
Q-score: 0.36
Aher A, Urnavicius L, Xue A, Neselu K, Kapoor TM
Nat Struct Mol Biol (2024) 31 pp. 1124-1133 [ DOI: doi:10.1038/s41594-024-01264-z Pubmed: 38609661 ]
- Tubulin gamma-1 chain (50 kDa, Protein from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Gamma-tubulin and alpha-tubulin (Complex from Trichoplusia ni)
- Tubulin alpha-1b chain (51 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
GMPCPP-microtubule decorated with Abl2-557-1090
Duan D, Lyu W, Chai P, Ma S, Wu K, Wu C, Xiong Y, Sestan N, Zhang K, Koleske AJ
Curr Biol (2023) 33 pp. 4582-4598.e10 [ DOI: doi:10.1016/j.cub.2023.09.018 Pubmed: 37858340 ]
- Abl2 c-terminals (557-1090) (Protein from Homo sapiens)
- Abl2-557-1090 (Complex from Homo sapiens)
- Gmpcpp-microtubule (Complex from Sus scrofa)
- Beta-tubulin (Protein from Sus scrofa)
- Alpha-tubulin (Protein from Sus scrofa)
- Gmpcpp-microtubules decorated with abl2-557-1090. (500 kDa, Complex)
Serre L, Delaroche J, Vinit A, Schoehn G, Denarier E, Fourest-Lieuvin A, Arnal I
J Cell Sci (2022) [ DOI: doi:10.1242/jcs.260152 ]
Subpellicular microtubule from detergent-extract Toxoplasma gondii cells
Resolution: 6.7 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7tns
Q-score: 0.118
Sun SY, Segev-Zarko LA, Chen M, Pintilie GD, Schmid MF, Ludtke SJ, Boothroyd JC, Chiu W
PNAS (2022) 119 [ Pubmed: 35121661 DOI: doi:10.1073/pnas.2111661119 ]
- Microtubule associated protein spm1 (38 kDa, Protein from Toxoplasma gondii)
- Microtubule complex of alpha-tubulin and beta-tubulin with intra-lumenal proteins (Cellular component from Toxoplasma gondii)
- Tubulin beta chain (50 kDa, Protein from Toxoplasma gondii)
- Tubulin alpha chain (50 kDa, Protein from Toxoplasma gondii)
- Pdi family protein (24 kDa, Protein from Toxoplasma gondii)
- Pdi family protein (21 kDa, Protein from Toxoplasma gondii)