Structure of the AcMNPV baculovirus VP39 nucleocapsid (C14 helical reconstruction)
Johnstone BA, Hardy JM, Ha J, Butkovic A, Koszalka P, Accurso C, Venugopal H, de Marco A, Krupovic M, Coulibaly F
Sci Adv (2024) 10 pp. eado2631-eado2631 [ Pubmed: 39693434 DOI: doi:10.1126/sciadv.ado2631 ]
- Major nucleocapsid protein vp39 of autographa californica multiple nucleopolyhedrovirus (Protein from Autographa californica multiple nucleopolyhedrovirus)
- C14 reconstruction of the helical portion of the nucleocapsid formed by dimers of vp39 (Complex from Autographa californica multiple nucleopolyhedrovirus)
- Autographa californica multiple nucleopolyhedrovirus (126 MDa, Virus from Autographa californica multiple nucleopolyhedrovirus)
Structure of the baculovirus major nucleocapsid protein VP39 (localised reconstruction)
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 8vwh
Q-score: 0.491
Johnstone BA, Hardy JM, Ha J, Butkovic A, Koszalka P, Accurso C, Venugopal H, de Marco A, Krupovic M, Coulibaly F
To Be Published
Johnstone BA, Hardy JM, Ha J, Butkovic A, Koszalka P, Accurso C, Venugopal H, de Marco M, Krupovic M, Coulibaly F
To Be Published
The base complex of the AcMNPV baculovirus nucleocapsid (Class 1, localised reconstruction)
Resolution: 4.71 Å
EM Method: Single-particle
Fitted PDBs: 8vwi
Q-score: 0.252
Johnstone BA, Hardy JM, Ha J, Butkovic A, Koszalka P, Accurso C, Venugopal H, de Marco A, Krupovic M, Coulibaly F
To Be Published
- Zinc ion (65 Da, Ligand)
- Capsid-associated protein vp80 (79 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Protein ac109 (44 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- 38k (ac98) protein in p143-lef5 intergenic region (38 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Major capsid protein (38 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Protein ac142 (55 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Protein c42 (41 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Occlusion-derived virus envelope protein e27 (33 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Autographa californica multiple nucleopolyhedrovirus (Virus from Autographa californica multiple nucleopolyhedrovirus)
The base complex of the AcMNPV baculovirus nucleocapsid (Class 2, localised reconstruction)
Resolution: 4.78 Å
EM Method: Single-particle
Fitted PDBs: 8vwj
Q-score: 0.243
Johnstone BA, Hardy JM, Ha J, Butkovic A, Koszalka P, Accurso C, Venugopal H, de Marco A, Krupovic M, Coulibaly F
To Be Published
- Protein ac109 (44 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- 38k (ac98) (38 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Capsid-associated protein vp80 (79 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Occlusion-derived virus envelope protein e27 (33 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Major capsid protein (38 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Autographa californica multiple nucleopolyhedrovirus (Virus from Autographa californica multiple nucleopolyhedrovirus)
- Protein c42 (41 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Zinc ion (65 Da, Ligand)
- Protein ac142 (55 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
Johnstone BA, Hardy JM, Ha J, Butkovic A, Koszalka P, Accurso C, Venugopal H, de Marco A, Krupovic M, Coulibaly F
To Be Published
Autographa californica multiple nucleopolyhedrovirus VP39
Resolution: 3.2 Å
EM Method: Helical reconstruction
Fitted PDBs: 8taf
Q-score: 0.534
Benning FMC, Jenni S, Garcia CY, Nguyen TH, Zhang X, Chao LH
Nat Commun (2024) 15 pp. 250-250 [ Pubmed: 38177118 DOI: doi:10.1038/s41467-023-44596-y ]
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 8i8a
Q-score: 0.402
Resolution: 4.31 Å
EM Method: Single-particle
Fitted PDBs: 8i8b
Q-score: 0.293
Jia X, Gao Y, Huang Y, Sun L, Li S, Li H, Zhang X, Li Y, He J, Wu W, Venkannagari H, Yang K, Baker ML, Zhang Q
Nat Commun (2023) 14 pp. 7481-7481 [ Pubmed: 37980340 DOI: doi:10.1038/s41467-023-43284-1 ]
- Acorf-109 peptide (44 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Viral capsid associated protein (79 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Occlusion-derived virus envelope/capsid protein (33 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Major viral capsid protein (38 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Autographa californica multiple nucleopolyhedrovirus (Virus from Autographa californica multiple nucleopolyhedrovirus)
- P40 (41 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Early 49 daa protein (55 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- 38k (38 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)