Local structure of BD55-5514 and BD55-5840 Fab and Omicron BA.1 RBD complex
Resolution: 3.42 Å
EM Method: Single-particle
Fitted PDBs: 7y0w
Q-score: 0.512
Cao Y, Jian F, Zhang Z, Yisimayi A, Hao X, Bao L, Yuan F, Yu Y, Du S, Wang J, Xiao T, Song W, Zhang Y, Liu P, An R, Wang P, Wang Y, Yang S, Niu X, Zhang Y, Gu Q, Shao F, Hu Y, Yin W, Zheng A, Wang Y, Qin C, Jin R, Xiao J, Xie XS
Cell Rep (2022) 41 pp. 111845-111845 [ Pubmed: 36493787 DOI: doi:10.1016/j.celrep.2022.111845 ]
- Bd55-5514h (13 kDa, Protein from Homo sapiens)
- Spike protein s1 (21 kDa, Protein from Homo sapiens)
- Local structure of bd55-5514 and bd55-5840 fab and omicron ba.1 rbd complex (Complex from Homo sapiens)
- Bd55-5840l (11 kDa, Protein from Homo sapiens)
- Bd55-5840h (13 kDa, Protein from Homo sapiens)
- Bd55-5514l (11 kDa, Protein from Homo sapiens)
SARS-CoV-2 Omicron BA.1 Variant Spike Trimer with two mouse ACE2 Bound
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 7xo4
Q-score: 0.212
Xu Y, Wu C, Cao X, Gu C, Liu H, Jiang M, Wang X, Yuan Q, Wu K, Liu J, Wang D, He X, Wang X, Deng SJ, Xu HE, Yin W
Cell Res (2022) 32 pp. 609-620 [ Pubmed: 35641567 DOI: doi:10.1038/s41422-022-00672-4 ]
- Zinc ion (65 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 omicron ba.1 variant spike trimer with two mouse ace2 bound (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Mus musculus)
- Sars-cov-2 omicron ba.1 variant spike trimer (Complex from Mus musculus)
- Mouse ace2 (Complex)
SARS-CoV-2 Omicron BA.1 Variant Spike Trimer with one mouse ACE2 Bound
Resolution: 3.13 Å
EM Method: Single-particle
Fitted PDBs: 7xo5
Q-score: 0.315
Xu Y, Wu C, Cao X, Gu C, Liu H, Jiang M, Wang X, Yuan Q, Wu K, Liu J, Wang D, He X, Wang X, Deng SJ, Xu HE, Yin W
Cell Res (2022) 32 pp. 609-620 [ Pubmed: 35641567 DOI: doi:10.1038/s41422-022-00672-4 ]
- Zinc ion (65 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 omicron ba.1 variant spike trimer with one mouse ace2 bound (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Mus musculus)
- Sars-cov-2 omicron ba.1 variant spike trimer (Complex from Mus musculus)
- Mouse ace2 (Complex)
SARS-CoV-2 Omicron BA.1 Variant RBD with mouse ACE2 Bound
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7xo6
Q-score: 0.472
Xu Y, Wu C, Cao X, Gu C, Liu H, Jiang M, Wang X, Yuan Q, Wu K, Liu J, Wang D, He X, Wang X, Deng SJ, Xu HE, Yin W
Cell Res (2022) 32 pp. 609-620 [ Pubmed: 35641567 DOI: doi:10.1038/s41422-022-00672-4 ]
- Sars-cov-2 omicron ba.1 variant rbd (Complex)
- Zinc ion (65 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mouse ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron ba.1 variant rbd with mouse ace2 bound (Complex from Mus musculus)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Mus musculus)