Photosynthetic LH2-LH1 complex from the purple bacterium Halorhodospira halophila
Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 8z81
Q-score: 0.682
Tani K, Nagashima KVP, Kojima R, Kondo M, Kanno R, Satoh I, Kawakami M, Hiwatashi N, Nakata K, Nagashima S, Inoue K, Isawa Y, Morishita R, Takaichi S, Purba ER, Hall M, Yu LJ, Madigan MT, Mizoguchi A, Humbel BM, Kimura Y, Nagasawa Y, Dewa T, Wang-Otomo ZY
Nat Commun (2025) 16 pp. 1410-1410 [ DOI: doi:10.1038/s41467-024-55811-9 Pubmed: 39915441 ]
- Bacteriochlorophyll a (911 Da, Ligand)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Antenna complex, alpha/beta subunit (7 kDa, Protein from Halorhodospira halophila)
- Photosynthetic lh2-lh1 complex from the purple phototrophic bacterium halorhodospira halophila (Complex from Halorhodospira halophila)
- Antenna complex, alpha/beta subunit (7 kDa, Protein from Halorhodospira halophila)
- Antenna complex, alpha/beta subunit (7 kDa, Protein from Halorhodospira halophila)
- Antenna complex, alpha/beta subunit (6 kDa, Protein from Halorhodospira halophila)
- Antenna complex, alpha/beta subunit (7 kDa, Protein from Halorhodospira halophila)
- Spirilloxanthin (596 Da, Ligand)
- Antenna complex, alpha/beta subunit (8 kDa, Protein from Halorhodospira halophila)
- Lh2-lh1 complex of halorhodospira halophila (Complex from Halorhodospira halophila)
- (1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
Photosynthetic LH1-RC-HiPIP complex from the purple bacterium Halorhodospira halophila
Tani K, Kanno R, Nagashima KVP, Kawakami M, Hiwatashi N, Nakata K, Nagashima S, Inoue K, Takaichi S, Purba ER, Hall M, Yu LJ, Madigan MT, Mizoguchi A, Humbel BM, Kimura Y, Wang-Otomo ZY
Commun Biol (2025) 8 pp. 42-42 [ Pubmed: 39799244 DOI: doi:10.1038/s42003-024-07421-w ]
- Bacteriochlorophyll a (911 Da, Ligand)
- Antenna complex, alpha/beta subunit (7 kDa, Protein from Halorhodospira halophila)
- Antenna complex, alpha/beta subunit (7 kDa, Protein from Halorhodospira halophila)
- Spirilloxanthin (596 Da, Ligand)
- Heme c (618 Da, Ligand)
- Cardiolipin (1 kDa, Ligand)
- Reaction center protein l chain (30 kDa, Protein from Halorhodospira halophila)
- High-potential iron-sulfur protein (15 kDa, Protein from Halorhodospira halophila)
- (2s)-3-hydroxypropane-1,2-diyl dihexadecanoate (568 Da, Ligand)
- Bacteriopheophytin a (889 Da, Ligand)
- (1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
- Fe (iii) ion (55 Da, Ligand)
- Water (18 Da, Ligand)
- Palmitic acid (256 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Photosynthetic reaction centre, h-chain (30 kDa, Protein from Halorhodospira halophila)
- Lh1-rc-hipip complex of halorhodospira halophila (Complex from Halorhodospira halophila)
- Ubiquinone-8 (727 Da, Ligand)
- Menaquinone 8 (717 Da, Ligand)
- Antenna complex, alpha/beta subunit (7 kDa, Protein from Halorhodospira halophila)
- Photosynthetic lh1-rc-hipip triple complex from the purple phototrophic bacterium halorhodospira halophila (Complex from Halorhodospira halophila)
- Photosynthetic reaction center cytochrome c subunit (40 kDa, Protein from Halorhodospira halophila)
- Iron/sulfur cluster (351 Da, Ligand)
- Reaction center protein m chain (35 kDa, Protein from Halorhodospira halophila)
- Antenna complex, alpha/beta subunit (8 kDa, Protein from Halorhodospira halophila)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
Photosynthetic LH1-RC complex from the purple bacterium Halorhodospira halophila
Tani K, Kanno R, Nagashima KVP, Kawakami M, Hiwatashi N, Nakata K, Nagashima S, Inoue K, Takaichi S, Purba ER, Hall M, Yu LJ, Madigan MT, Mizoguchi A, Humbel BM, Kimura Y, Wang-Otomo ZY
Commun Biol (2025) 8 pp. 42-42 [ Pubmed: 39799244 DOI: doi:10.1038/s42003-024-07421-w ]
- Bacteriochlorophyll a (911 Da, Ligand)
- Antenna complex, alpha/beta subunit (7 kDa, Protein from Halorhodospira halophila)
- Antenna complex, alpha/beta subunit (7 kDa, Protein from Halorhodospira halophila)
- Spirilloxanthin (596 Da, Ligand)
- Heme c (618 Da, Ligand)
- Cardiolipin (1 kDa, Ligand)
- Reaction center protein l chain (30 kDa, Protein from Halorhodospira halophila)
- (2s)-3-hydroxypropane-1,2-diyl dihexadecanoate (568 Da, Ligand)
- Bacteriopheophytin a (889 Da, Ligand)
- (1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
- Fe (iii) ion (55 Da, Ligand)
- Water (18 Da, Ligand)
- Lh1-rc complex of halorhodospira halophila (Complex from Halorhodospira halophila)
- Photosynthetic lh1-rc complex from the purple phototrophic bacterium halorhodospira halophila (Complex from Halorhodospira halophila)
- Palmitic acid (256 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Ubiquinone-8 (727 Da, Ligand)
- Menaquinone 8 (717 Da, Ligand)
- Antenna complex, alpha/beta subunit (7 kDa, Protein from Halorhodospira halophila)
- Photosynthetic reaction center h subunit (30 kDa, Protein from Halorhodospira halophila)
- Photosynthetic reaction center cytochrome c subunit (40 kDa, Protein from Halorhodospira halophila)
- Reaction center protein m chain (35 kDa, Protein from Halorhodospira halophila)
- Antenna complex, alpha/beta subunit (8 kDa, Protein from Halorhodospira halophila)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF Allochromatium tepidum
Resolution: 2.81 Å
EM Method: Single-particle
Fitted PDBs: 7vrj
Q-score: 0.601
Tani K, Kobayashi K, Hosogi N, Ji XC, Nagashima S, Nagashima KVP, Izumida A, Inoue K, Tsukatani Y, Kanno R, Hall M, Yu LJ, Ishikawa I, Okura Y, Madigan MT, Mizoguchi A, Humbel BM, Kimura Y, Wang-Otomo ZY
J Biol Chem (2022) 298 pp. 101967-101967 [ DOI: doi:10.1016/j.jbc.2022.101967 Pubmed: 35460693 ]
- Light-harvesting protein lh1 alpha1 (7 kDa, Protein from Allochromatium tepidum)
- Bacteriochlorophyll a (911 Da, Ligand)
- Spirilloxanthin (596 Da, Ligand)
- Heme c (618 Da, Ligand)
- Light-harvesting protein lh1 beta3 (5 kDa, Protein from Allochromatium tepidum)
- Photosynthetic reaction center cytochrome c subunit (43 kDa, Protein from Allochromatium tepidum)
- Light-harvesting protein lh1 alpha3 (7 kDa, Protein from Allochromatium tepidum)
- Bacteriopheophytin a (889 Da, Ligand)
- Light-harvesting protein lh1 beta1 (5 kDa, Protein from Allochromatium tepidum)
- (1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
- Fe (iii) ion (55 Da, Ligand)
- Water (18 Da, Ligand)
- Photosynthetic reaction center h subunit (28 kDa, Protein from Allochromatium tepidum)
- Photosynthetic lh1-rc complex from the purple phototrophic bacterium allochromatium tepidum (Complex from Allochromatium tepidum)
- Palmitic acid (256 Da, Ligand)
- Light-harvesting protein lh1 alpha2 (5 kDa, Protein from Allochromatium tepidum)
- Magnesium ion (24 Da, Ligand)
- Photosynthetic reaction center l subunit (31 kDa, Protein from Allochromatium tepidum)
- Ubiquinone-8 (727 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Menaquinone 8 (717 Da, Ligand)
- Photosynthetic reaction center m subunit (36 kDa, Protein from Allochromatium tepidum)
- Lauryl dimethylamine-n-oxide (229 Da, Ligand)
- Diacyl glycerol (625 Da, Ligand)
- Cardiolipin (1 kDa, Ligand)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)