STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES DIMER
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 7vy2
Q-score: 0.534
Tani K, Kanno R, Kikuchi R, Kawamura S, Nagashima KVP, Hall M, Takahashi A, Yu LJ, Kimura Y, Madigan MT, Mizoguchi A, Humbel BM, Wang-Otomo ZY
Nat Commun (2022) 13 pp. 1904-1904 [ Pubmed: 35393413 DOI: doi:10.1038/s41467-022-29453-8 ]
- (1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
- Reaction center protein m chain (34 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- Bacteriochlorophyll a (911 Da, Ligand)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Photosynthetic reaction center l subunit (31 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- Rhodobacter sphaeroides dimeric lh1-rc complex (Complex from Rhodobacter sphaeroides f. sp. denitrificans)
- Phosphatidylethanolamine (734 Da, Ligand)
- Spheroidene (568 Da, Ligand)
- Antenna pigment protein beta chain (5 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- Photosynthetic reaction center subunit h (28 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- Lauryl dimethylamine-n-oxide (229 Da, Ligand)
- Antenna pigment protein alpha chain (6 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- Pufx (8 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- Fe (iii) ion (55 Da, Ligand)
- Bacteriopheophytin a (889 Da, Ligand)
- Photosynthetic lh1-rc complex from the purple phototrophic bacterium rhodobacter sphaeroides dimer (Complex from Rhodobacter sphaeroides f. sp. denitrificans)
- Protein-u (5 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- Cardiolipin (1 kDa, Ligand)
- Ubiquinone-10 (863 Da, Ligand)
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES LACKING PROTEIN-U
Resolution: 2.63 Å
EM Method: Single-particle
Fitted PDBs: 7vy3
Q-score: 0.628
Tani K, Kanno R, Kikuchi R, Kawamura S, Nagashima KVP, Hall M, Takahashi A, Yu LJ, Kimura Y, Madigan MT, Mizoguchi A, Humbel BM, Wang-Otomo ZY
Nat Commun (2022) 13 pp. 1904-1904 [ Pubmed: 35393413 DOI: doi:10.1038/s41467-022-29453-8 ]
- Fe (iii) ion (55 Da, Ligand)
- Antenna pigment protein beta chain (5 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- (1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
- Reaction center protein m chain (34 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- Spheroidene (568 Da, Ligand)
- Photosynthetic reaction center subunit h (28 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- Bacteriochlorophyll a (911 Da, Ligand)
- Cardiolipin (1 kDa, Ligand)
- Ubiquinone-10 (863 Da, Ligand)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Lauryl dimethylamine-n-oxide (229 Da, Ligand)
- Photosynthetic reaction center l subunit (31 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- Antenna pigment protein alpha chain (6 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- Rhodobacter sphaeroides monomeric lh1-rc complex lacking protein-u (Complex from Rhodobacter sphaeroides f. sp. denitrificans)
- Photosynthetic lh1-rc complex from the purple phototrophic bacterium rhodobacter sphaeroides monomer lacking protein-u (Complex from Rhodobacter sphaeroides f. sp. denitrificans)
- Pufx (8 kDa, Protein from Rhodobacter sphaeroides f. sp. denitrificans)
- Bacteriopheophytin a (889 Da, Ligand)
- Phosphatidylethanolamine (734 Da, Ligand)