C. elegans SID1 in complex with dsRNA
Resolution: 2.21 Å
EM Method: Single-particle
Fitted PDBs: 8xc1
Q-score: 0.566
Wang R, Cong Y, Qian D, Yan C, Gong D
Nucleic Acids Res (2024) 52 pp. 6718-6727 [ Pubmed: 38742627 DOI: doi:10.1093/nar/gkae395 ]
- Systemic rna interference defective protein 1 (90 kDa, Protein from Caenorhabditis elegans)
- Rna (50-mer) (16 kDa, RNA from Arabidopsis thaliana)
- (2s)-3-(hexadecanoyloxy)-2-[(9z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate (760 Da, Ligand)
- Rna (Complex from Arabidopsis thaliana)
- Complex of sid1 and dsrna (Complex)
- Cholesterol (386 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Rna (50-mer) (15 kDa, RNA from Arabidopsis thaliana)
- Sid1 (Complex from Caenorhabditis elegans)
Structure of mechanically activated ion channel OSCA1.2 in peptidiscs
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8t56
Q-score: 0.584
Jojoa-Cruz S, Burendei B, Lee WH, Ward AB
Structure (2024) 32 pp. 157- [ DOI: doi:10.1016/j.str.2023.11.009 Pubmed: 38103547 ]
- Nspr peptide (4 kDa, Protein from synthetic construct)
- 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (760 Da, Ligand)
- Cholesterol hemisuccinate (486 Da, Ligand)
- Calcium permeable stress-gated cation channel 1 (89 kDa, Protein from Arabidopsis thaliana)
- Osca1.2 in peptidisc (176 kDa, Complex)
- Peptidisc peptide (Complex from synthetic construct)
- Cholesterol (386 Da, Ligand)
- Osca1.2 (Complex from Arabidopsis thaliana)
- Palmitic acid (256 Da, Ligand)
Structure of mechanically activated ion channel OSCA2.3 in peptidiscs
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8t57
Q-score: 0.53
Jojoa-Cruz S, Burendei B, Lee WH, Ward AB
Structure (2024) 32 pp. 157- [ DOI: doi:10.1016/j.str.2023.11.009 Pubmed: 38103547 ]
- Palmitic acid (256 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- Csc1-like protein hyp1 (80 kDa, Protein from Arabidopsis thaliana)
- Osca2.3 in peptidisc (159 kDa, Complex from Arabidopsis thaliana)
AtSLAC1 8D mutant in closed state
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8j0j
Q-score: 0.64
Lee Y, Jeong HS, Jung S, Hwang J, Le CTH, Jun SH, Du EJ, Kang K, Kim BG, Lim HH, Lee S
Nat Commun (2023) 14 pp. 7345-7345 [ Pubmed: 37963863 DOI: doi:10.1038/s41467-023-43193-3 ]
- Chloride ion (35 Da, Ligand)
- Cholesterol hemisuccinate (486 Da, Ligand)
- Guard cell s-type anion channel slac1,green fluorescent protein (94 kDa, Protein from Aequorea victoria)
- Trimer of closed state atslac1 8d mutant with sfgfp tag in gdn and chs micelle (280 kDa, Complex from Arabidopsis thaliana)
Resolution: 3.84 Å
EM Method: Single-particle
Fitted PDBs: 8j1e
Q-score: 0.452
Lee Y, Jeong HS, Jung S, Hwang J, Le CTH, Jun SH, Du EJ, Kang K, Kim BG, Lim HH, Lee S
Nat Commun (2023) 14 pp. 7345-7345 [ Pubmed: 37963863 DOI: doi:10.1038/s41467-023-43193-3 ]
- Chloride ion (35 Da, Ligand)
- Cholesterol hemisuccinate (486 Da, Ligand)
- Guard cell s-type anion channel slac1,green fluorescent protein (93 kDa, Protein from Aequorea victoria)
- Trimer of open state atslac1 with sfgfp tag in gdn and chs micelle (280 kDa, Complex from Arabidopsis thaliana)
AtSLAC1 6D mutant in closed state
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8gw6
Q-score: 0.498
Lee Y, Jeong HS, Jung S, Hwang J, Le CTH, Jun SH, Du EJ, Kang K, Kim BG, Lim HH, Lee S
Nat Commun (2023) 14 pp. 7345-7345 [ Pubmed: 37963863 DOI: doi:10.1038/s41467-023-43193-3 ]
- Chloride ion (35 Da, Ligand)
- Trimer of closed state atslac1 6d mutant with sfgfp tag in gdn and chs micelle (280 kDa, Complex from Arabidopsis thaliana)
- Guard cell s-type anion channel slac1,green fluorescent protein (fragment) (94 kDa, Protein from Arabidopsis thaliana)
- Cholesterol hemisuccinate (486 Da, Ligand)
AtSLAC1 6D mutant in open state
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8gw7
Q-score: 0.454
Lee Y, Jeong HS, Jung S, Hwang J, Le CTH, Jun SH, Du EJ, Kang K, Kim BG, Lim HH, Lee S
Nat Commun (2023) 14 pp. 7345-7345 [ Pubmed: 37963863 DOI: doi:10.1038/s41467-023-43193-3 ]
- Chloride ion (35 Da, Ligand)
- Guard cell s-type anion channel slac1,green fluorescent protein (fragment) (94 kDa, Protein from Arabidopsis thaliana)
- Trimer of open state atslac1 6d mutant with sfgfp tag in gdn and chs micelle (280 kDa, Complex from Arabidopsis thaliana)
- Cholesterol hemisuccinate (486 Da, Ligand)
Cryo-EM structure of the ABCG25 bound to CHS
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8wba
Q-score: 0.492
Xin J, Zhou Y, Qiu Y, Geng H, Wang Y, Song Y, Liang J, Yan K
Plant Commun. (2024) 5 pp. 100776-100776 [ DOI: doi:10.1016/j.xplc.2023.100776 Pubmed: 38050355 ]
- Homodimer of abcg25 bound to chs (Complex from Arabidopsis thaliana)
- Abc transporter g family member 25 (77 kDa, Protein from Arabidopsis thaliana)
- Cholesterol hemisuccinate (486 Da, Ligand)
Cryo-EM structure of abscisic acid transporter AtABCG25 with CHS
Resolution: 2.85 Å
EM Method: Single-particle
Fitted PDBs: 8i3c
Q-score: 0.572
Huang X, Zhang X, An N, Zhang M, Ma M, Yang Y, Jing L, Wang Y, Chen Z, Zhang P
Nat Plants (2023) 9 pp. 1709-1719 [ Pubmed: 37666961 DOI: doi:10.1038/s41477-023-01509-7 ]
- Arabidopsis thaliana abcg25 (Complex from Arabidopsis thaliana)
- Abc transporter g family member 25 (72 kDa, Protein from Arabidopsis thaliana)
- Cholesterol hemisuccinate (486 Da, Ligand)