Cryo-EM strcuture of Cas5-HNH Cascade,apo-Conf2
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8zm3
Q-score: 0.22
To Be Published
- Cas5-hnh cascade (400 MDa, Complex from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Rna (61-mer) (19 kDa, RNA from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr system cascade subunit casc (41 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr-associated endoribonuclease cse3 (31 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Magnesium ion (24 Da, Ligand)
- Crispr-associated protein cse1 (crispr_cse1) (60 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr system cascade subunit casd (43 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr-associated protein cse2 (crispr_cse2) (20 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
Cryo-EM strcuture of Cas5-HNH Cascade,Conf3
Resolution: 2.55 Å
EM Method: Single-particle
Fitted PDBs: 8zol
Q-score: 0.364
To Be Published
- Cas5-hnh cascade (400 MDa, Complex from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Rna (61-mer) (19 kDa, RNA from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr system cascade subunit casc (41 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr-associated endoribonuclease cse3 (31 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr system cascade subunit casd (43 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
Cryo-EM structure of Cas5-HNH Cascade bound with dsDNA
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 9jxs
Q-score: 0.446
Liu YN, Wang L, Zhang H, Zhu H
To Be Published
- Non-target dna (16 kDa, DNA from Escherichia coli)
- Crispr system cascade subunit casc (41 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Cas5-hnh cascade complex bound with dna (400 MDa, Complex from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr-associated endoribonuclease cse3 (31 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Rna (61-mer) (19 kDa, RNA from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Crispr-associated protein cse1 (crispr_cse1) (60 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr system cascade subunit casd (43 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Dna (54-mer) (16 kDa, DNA from Escherichia coli)
- Crispr-associated protein cse2 (crispr_cse2) (20 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
Cryo-EM strcuture of Cas5-HNH Cascade,Conf1
Resolution: 2.47 Å
EM Method: Single-particle
Fitted PDBs: 8zlu
Q-score: 0.566
To Be Published
- Cas5-hnh cascade (400 MDa, Complex from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Rna (61-mer) (19 kDa, RNA from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr system cascade subunit casc (41 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr-associated endoribonuclease cse3 (31 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Magnesium ion (24 Da, Ligand)
- Crispr-associated protein cse1 (crispr_cse1) (62 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr system cascade subunit casd (43 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr-associated protein cse2 (crispr_cse2) (20 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
Cryo-EM structure of Cas5-HNH Cascade bound with sDNA, Conf1
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8zp7
Q-score: 0.517
Liu YN, Wang L, Zhang H, Zhu H
To Be Published
- Cas5-hnh cascade (400 MDa, Complex from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Dna (60-mer) (18 kDa, DNA from Escherichia coli)
- Crispr system cascade subunit casc (41 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr-associated endoribonuclease cse3 (31 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Rna (61-mer) (19 kDa, RNA from Escherichia coli)
- Crispr-associated protein cse1 (crispr_cse1) (62 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Magnesium ion (24 Da, Ligand)
- Crispr system cascade subunit casd (43 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr-associated protein cse2 (crispr_cse2) (20 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 8yb6
Q-score: 0.512
Zhang C, Chen F, Wang F, Xu H, Xue J, Li Z
Mol Cell (2024) 84 pp. 3141- [ DOI: doi:10.1016/j.molcel.2024.06.033 Pubmed: 39047725 ]
- Crispr system cascade subunit casc (41 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Type i-ehnh cascade complex (Complex from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- 61-nt crrna (19 kDa, RNA from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr-associated endoribonuclease cse3 (31 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr-associated protein cse1 (crispr_cse1) (60 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr system cascade subunit casd (43 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Zinc ion (65 Da, Ligand)
- Crispr-associated protein cse2 (crispr_cse2) (20 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
Type I-EHNH Cascade-ssDNA complex
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8yha
Q-score: 0.508
Zhang C, Chen F, Wang F, Xu H, Xue J, Li Z
Mol Cell (2024) 84 pp. 3141- [ DOI: doi:10.1016/j.molcel.2024.06.033 Pubmed: 39047725 ]
- 61-nt crrna (19 kDa, RNA from Candidatus Cloacimonadota bacterium)
- Crispr system cascade subunit casc (41 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Dna/rna (47-mer) (17 kDa, Macromolecule from Candidatus Cloacimonadota bacterium)
- Crispr-associated endoribonuclease cse3 (31 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Crispr-associated protein cse1 (crispr_cse1) (60 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Type i-ehnh cascade-ssdna complex (Complex from Candidatus Cloacimonadota bacterium)
- Crispr system cascade subunit casd (43 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)
- Zinc ion (65 Da, Ligand)
- Crispr-associated protein cse2 (crispr_cse2) (20 kDa, Protein from Candidatus Cloacimonetes bacterium ADurb.Bin088)