Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6o7e
Q-score: 0.442
Jia N, Jones R, Sukenick G, Patel DJ
Mol Cell (2019) 75 pp. 933-943.e6 [ DOI: doi:10.1016/j.molcel.2019.06.013 Pubmed: 31326272 ]
- Csm4 (32 kDa, Protein from Thermococcus onnurineus (strain NA1))
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Manganese (ii) ion (54 Da, Ligand)
- Csm-crrna-target rna complex (300 kDa, Complex from Thermococcus onnurineus)
- Zinc ion (65 Da, Ligand)
- Rna (40-mer) (12 kDa, RNA from Thermococcus onnurineus)
- Csm5 (40 kDa, Protein from Thermococcus onnurineus NA1)
- Csm2 (21 kDa, Protein from Thermococcus onnurineus (strain NA1))
- Rna (38-mer) (12 kDa, RNA from Thermococcus onnurineus)
- Csm1 (89 kDa, Protein from Thermococcus onnurineus (strain NA1))
- Csm3 (32 kDa, Protein from Thermococcus onnurineus (strain NA1))
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6o7h
Q-score: 0.521
Jia N, Jones R, Sukenick G, Patel DJ
Mol Cell (2019) 75 pp. 933-943.e6 [ DOI: doi:10.1016/j.molcel.2019.06.013 Pubmed: 31326272 ]
- Csm5 (40 kDa, Protein from Thermococcus onnurineus (strain NA1))
- Csm2 (21 kDa, Protein from Thermococcus onnurineus (strain NA1))
- Rna (38-mer) (12 kDa, RNA from Thermococcus onnurineus (strain NA1))
- Csm4 (32 kDa, Protein from Thermococcus onnurineus (strain NA1))
- Csm-crrna-target rna-amppnp complex (Complex from Thermococcus onnurineus)
- Rna (40-mer) (12 kDa, RNA from Thermococcus onnurineus (strain NA1))
- Csm3 (32 kDa, Protein from Thermococcus onnurineus (strain NA1))
- Guanosine-5'-monophosphate (363 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Cyclic dna ca4 (1 kDa, RNA from synthetic construct)
- Crispr system single-strand-specific deoxyribonuclease cas10/csm1 (subtype iii-a) (89 kDa, Protein from Thermococcus onnurineus (strain NA1))
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6o7i
Q-score: 0.439
Jia N, Jones R, Sukenick G, Patel DJ
Mol Cell (2019) 75 pp. 933-943.e6 [ DOI: doi:10.1016/j.molcel.2019.06.013 Pubmed: 31326272 ]
- Csm5 (40 kDa, Protein from Thermococcus onnurineus (strain NA1))
- Csm4 (32 kDa, Protein from Thermococcus onnurineus (strain NA1))
- Rna (5'-r(p*ap*ap*ap*a)-3') (1 kDa, RNA from synthetic construct)
- Csm-crrna-target rna complex (300 kDa, Complex from Thermococcus onnurineus)
- Crispr system single-strand-specific deoxyribonuclease cas10/csm1 (subtype iii-a) (89 kDa, Protein from Thermococcus onnurineus (strain NA1))
- Zinc ion (65 Da, Ligand)
- Rna (40-mer) (12 kDa, RNA from Thermococcus onnurineus)
- Csm2 (21 kDa, Protein from Thermococcus onnurineus (strain NA1))
- Rna (38-mer) (12 kDa, RNA from Thermococcus onnurineus)
- Csm3 (32 kDa, Protein from Thermococcus onnurineus (strain NA1))
Cryo-EM structure of Csm-crRNA binary complex in type III-A CRISPR-Cas system
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6muu
Q-score: 0.51
Jia N, Mo CY, Wang C, Eng ET, Marraffini LA, Patel DJ
Mol Cell (2019) 73 pp. 264- [ DOI: doi:10.1016/j.molcel.2018.11.007 Pubmed: 30503773 ]
- Uncharacterized protein csm5 (46 kDa, Protein from Thermococcus onnurineus)
- Uncharacterized protein csm2 (21 kDa, Protein from Thermococcus onnurineus)
- Zinc ion (65 Da, Ligand)
- Rna (25-mer) (12 kDa, RNA from Thermococcus onnurineus)
- Csm-crrna binary complex (250 kDa, Complex from Thermococcus onnurineus)
- Uncharacterized protein csm1 (89 kDa, Protein from Thermococcus onnurineus)
- Uncharacterized protein csm3 (32 kDa, Protein from Thermococcus onnurineus)
- Uncharacterized protein csm4 (32 kDa, Protein from Thermococcus onnurineus)
Cryo-EM structure of larger Csm-crRNA-target RNA ternary complex in type III-A CRISPR-Cas system
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6mus
Q-score: 0.402
Jia N, Mo CY, Wang C, Eng ET, Marraffini LA, Patel DJ
Mol Cell (2019) 73 pp. 264- [ DOI: doi:10.1016/j.molcel.2018.11.007 Pubmed: 30503773 ]
- Uncharacterized protein csm5 (46 kDa, Protein from Thermococcus onnurineus)
- Rna (25-mer) (12 kDa, RNA from Thermococcus onnurineus)
- Csm-crrna-target rna larger complex (300 kDa, Complex from Thermococcus onnurineus)
- Rna (33-mer) (12 kDa, RNA from Thermococcus onnurineus)
- Uncharacterized protein csm2 (21 kDa, Protein from Thermococcus onnurineus)
- Zinc ion (65 Da, Ligand)
- Uncharacterized protein csm3 (32 kDa, Protein from Thermococcus onnurineus)
- Uncharacterized protein csm1 (89 kDa, Protein from Thermococcus onnurineus)
- Uncharacterized protein csm4 (32 kDa, Protein from Thermococcus onnurineus)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6mut
Q-score: 0.427
Jia N, Mo CY, Wang C, Eng ET, Marraffini LA, Patel DJ
Mol Cell (2019) 73 pp. 264- [ DOI: doi:10.1016/j.molcel.2018.11.007 Pubmed: 30503773 ]
- Uncharacterized protein csm5 (46 kDa, Protein from Thermococcus onnurineus)
- Ternary csm-crrna-target rna with anti-tag sequence complex (250 kDa, Complex from Thermococcus onnurineus)
- Rna (5'-r(*gp*up*gp*gp*ap*ap*ap*gp*gp*cp*gp*gp*gp*cp*ap*gp*ap*gp*gp*c)-3') (12 kDa, RNA from Thermococcus onnurineus)
- Uncharacterized protein csm2 (21 kDa, Protein from Thermococcus onnurineus)
- Zinc ion (65 Da, Ligand)
- Uncharacterized protein csm3 (32 kDa, Protein from Thermococcus onnurineus)
- Rna (5'-r(p*cp*cp*up*cp*up*gp*cp*cp*cp*gp*cp*cp*up*up*up*cp*cp*ap*c)-3') (14 kDa, RNA from Thermococcus onnurineus)
- Uncharacterized protein csm1 (89 kDa, Protein from Thermococcus onnurineus)
- Uncharacterized protein csm4 (32 kDa, Protein from Thermococcus onnurineus)