Staphylococcus epidermidis RP62a CRISPR effector subcomplex
Resolution: 3.55 Å
EM Method: Single-particle
Fitted PDBs: 7uzw
Q-score: 0.378
Smith EM, Ferrell S, Tokars VL, Mondragon A
Structure (2022) 30 pp. 1109- [ Pubmed: 35714601 DOI: doi:10.1016/j.str.2022.05.013 ]
- Crispr system single-strand-specific deoxyribonuclease cas10/csm1 (subtype iii-a) (87 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crispr system cms protein csm4 (34 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crrna (13 kDa, RNA from Staphylococcus epidermidis RP62A)
- Crispr system cms endoribonuclease csm3 (24 kDa, Protein from Staphylococcus epidermidis RP62A)
- Staphylococcus epidermidis rp62a crispr effector subcomplex (Complex from Staphylococcus epidermidis RP62A)
Staphylococcus epidermidis RP62a CRISPR effector subcomplex with non-self target RNA bound
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 7uzx
Q-score: 0.371
Smith EM, Ferrell S, Tokars VL, Mondragon A
Structure (2022) 30 pp. 1109-1128.e6 [ Pubmed: 35714601 DOI: doi:10.1016/j.str.2022.05.013 ]
- Crispr system single-strand-specific deoxyribonuclease cas10/csm1 (subtype iii-a) (87 kDa, Protein from Staphylococcus epidermidis RP62A)
- Staphylococcus epidermidis rp62a crispr rna: repeat plus spacer sequence 2 (11 kDa, RNA from Staphylococcus epidermidis RP62A)
- Crispr system cms protein csm4 (34 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crispr system cms endoribonuclease csm3 (24 kDa, Protein from Staphylococcus epidermidis RP62A)
- Staphylococcus epidermidis rp62a crispr effector subcomplex with target rna bound (Complex from Staphylococcus epidermidis)
- Crispr non-self rna target (12 kDa, RNA from Staphylococcus epidermidis RP62A)
Staphylococcus epidermidis RP62A CRISPR effector complex with non-self target RNA 2
Resolution: 4.05 Å
EM Method: Single-particle
Fitted PDBs: 7uzy
Q-score: 0.236
Smith EM, Ferrell S, Tokars VL, Mondragon A
Structure (2022) 30 pp. 1109-1128.e6 [ Pubmed: 35714601 DOI: doi:10.1016/j.str.2022.05.013 ]
- Crispr system single-strand-specific deoxyribonuclease cas10/csm1 (subtype iii-a) (87 kDa, Protein from Staphylococcus epidermidis RP62A)
- Rna (37-mer) (11 kDa, RNA from Staphylococcus epidermidis RP62A)
- Crispr system cms protein csm2 (15 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crispr system cms protein csm4 (34 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crispr system cms endoribonuclease csm3 (24 kDa, Protein from Staphylococcus epidermidis RP62A)
- Rna (40-mer) (12 kDa, RNA from Staphylococcus epidermidis RP62A)
- Staphylococcus epidermidis rp62a crispr effector complex with non-self target rna (Complex from Staphylococcus epidermidis)
Staphylococcus epidermidis RP62a CRISPR tall effector complex
Resolution: 4.45 Å
EM Method: Single-particle
Fitted PDBs: 7uzz
Q-score: 0.223
Smith EM, Ferrell S, Tokars VL, Mondragon A
Structure (2022) 30 pp. 1109-1128.e6 [ Pubmed: 35714601 DOI: doi:10.1016/j.str.2022.05.013 ]
- Crispr system single-strand-specific deoxyribonuclease cas10/csm1 (subtype iii-a) (87 kDa, Protein from Staphylococcus epidermidis RP62A)
- Staphylococcus epidermidis rp62a crispr tall effector complex (Complex from Staphylococcus epidermidis)
- Crispr system cms protein csm2 (15 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crispr system cms protein csm5 (39 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crispr system cms protein csm4 (34 kDa, Protein from Staphylococcus epidermidis RP62A)
- Rna (37-mer) (11 kDa, RNA from Staphylococcus epidermidis RP62A)
- Crispr system cms endoribonuclease csm3 (24 kDa, Protein from Staphylococcus epidermidis RP62A)
Staphylococcus epidermidis RP62a CRISPR tall effector complex with bound ATP
Resolution: 3.87 Å
EM Method: Single-particle
Fitted PDBs: 7v00
Q-score: 0.319
Smith EM, Ferrell S, Tokars VL, Mondragon A
Structure (2022) 30 pp. 1109-1128.e6 [ Pubmed: 35714601 DOI: doi:10.1016/j.str.2022.05.013 ]
- Crispr system single-strand-specific deoxyribonuclease cas10/csm1 (subtype iii-a) (87 kDa, Protein from Staphylococcus epidermidis RP62A)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Rna (37-mer) (11 kDa, RNA from Staphylococcus epidermidis RP62A)
- Crispr system cms protein csm2 (15 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crispr system cms protein csm5 (39 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crispr system cms protein csm4 (34 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crispr system cms endoribonuclease csm3 (24 kDa, Protein from Staphylococcus epidermidis RP62A)
- Staphylococcus epidermidis rp62a crispr tall effector complex with bound atp (Complex from Staphylococcus epidermidis)
Staphylococcus epidermidis RP62a CRISPR short effector complex with self RNA target and ATP
Resolution: 3.67 Å
EM Method: Single-particle
Fitted PDBs: 7v01
Q-score: 0.303
Smith EM, Ferrell S, Tokars VL, Mondragon A
Structure (2022) 30 pp. 1109-1128.e6 [ Pubmed: 35714601 DOI: doi:10.1016/j.str.2022.05.013 ]
- Crispr system single-strand-specific deoxyribonuclease cas10/csm1 (subtype iii-a) (87 kDa, Protein from Staphylococcus epidermidis RP62A)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Crispr system cms protein csm2 (15 kDa, Protein from Staphylococcus epidermidis RP62A)
- Rna (37-mer) (11 kDa, RNA from Staphylococcus epidermidis)
- Crispr system cms protein csm5 (39 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crispr system cms protein csm4 (34 kDa, Protein from Staphylococcus epidermidis RP62A)
- Rna (37-mer) (11 kDa, RNA from Staphylococcus epidermidis RP62A)
- Crispr system cms endoribonuclease csm3 (24 kDa, Protein from Staphylococcus epidermidis RP62A)
- Staphylococcus epidermidis rp62a crispr short effector complex with self target rna and atp (Complex from Staphylococcus epidermidis)
Staphylococcus epidermidis RP62A CRISPR short effector complex
Resolution: 4.97 Å
EM Method: Single-particle
Fitted PDBs: 7v02
Q-score: 0.172
Smith EM, Ferrell S, Tokars VL, Mondragon A
Structure (2022) 30 pp. 1109-1128.e6 [ Pubmed: 35714601 DOI: doi:10.1016/j.str.2022.05.013 ]
- Crispr system single-strand-specific deoxyribonuclease cas10/csm1 (subtype iii-a) (87 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crispr system cms protein csm2 (15 kDa, Protein from Staphylococcus epidermidis RP62A)
- Staphylococcus epidermidis rp62a crispr short effector complex (Complex from Staphylococcus epidermidis)
- Crispr system cms protein csm5 (39 kDa, Protein from Staphylococcus epidermidis RP62A)
- Crispr system cms protein csm4 (34 kDa, Protein from Staphylococcus epidermidis RP62A)
- Rna (37-mer) (11 kDa, RNA from Staphylococcus epidermidis RP62A)
- Crispr system cms endoribonuclease csm3 (24 kDa, Protein from Staphylococcus epidermidis RP62A)
Structure of the Lactococcus lactis Csm CTR_4:3 CRISPR-Cas Complex
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6xn3
Q-score: 0.467
Sridhara S, Rai J, Whyms C, Goswami H, He H, Woodside W, Terns MP, Li H
Commun Biol (2022) 5 pp. 279-279 [ Pubmed: 35351985 DOI: doi:10.1038/s42003-022-03187-1 ]
- Crispr-associated protein csm2 (15 kDa, Protein from Lactococcus lactis subsp. lactis)
- Crispr-associated protein csm5 (40 kDa, Protein from Lactococcus lactis subsp. lactis)
- Lactococcus lactis csm crispr-cas ntr complex (Complex from Lactococcus lactis subsp. lactis)
- Crispr rna (11 kDa, RNA from Lactococcus lactis subsp. lactis)
- Target rna (11 kDa, RNA from Lactococcus lactis subsp. lactis)
- Crispr-associated protein csm4 (33 kDa, Protein from Lactococcus lactis subsp. lactis)
- Crispr-associated protein csm3 (23 kDa, Protein from Lactococcus lactis subsp. lactis)
- Crispr-associated protein cas10 (87 kDa, Protein from Lactococcus lactis subsp. lactis)
Structure of the Lactococcus lactis Csm CTR_3:2 CRISPR-Cas Complex
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 6xn4
Q-score: 0.414
Sridhara S, Rai J, Whyms C, Goswami H, He H, Woodside W, Terns MP, Li H
Commun Biol (2022) 5 pp. 279-279 [ Pubmed: 35351985 DOI: doi:10.1038/s42003-022-03187-1 ]
- Crispr-associated protein csm2 (15 kDa, Protein from Lactococcus lactis subsp. lactis)
- Crispr-associated protein csm5 (40 kDa, Protein from Lactococcus lactis subsp. lactis)
- Lactococcus lactis csm crispr-cas ctr_3:2 complex (Complex from Lactococcus lactis subsp. lactis)
- Crispr rna (11 kDa, RNA from Lactococcus lactis subsp. lactis)
- Target rna (9 kDa, RNA from Lactococcus lactis subsp. lactis)
- Crispr-associated protein csm4 (33 kDa, Protein from Lactococcus lactis subsp. lactis)
- Crispr-associated protein csm3 (23 kDa, Protein from Lactococcus lactis subsp. lactis)
- Crispr-associated protein cas10 (87 kDa, Protein from Lactococcus lactis subsp. lactis)
Structure of the Lactococcus lactis Csm Apo- CRISPR-Cas Complex
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 6xn5
Q-score: 0.486
Sridhara S, Rai J, Whyms C, Goswami H, He H, Woodside W, Terns MP, Li H
Commun Biol (2022) 5 pp. 279-279 [ Pubmed: 35351985 DOI: doi:10.1038/s42003-022-03187-1 ]
- Crispr-associated protein csm5 (40 kDa, Protein from Lactococcus lactis subsp. lactis)
- Crispr rna (10 kDa, RNA from Lactococcus lactis subsp. lactis)
- Lactococcus lactis csm crispr-cas apo complex (Complex from Lactococcus lactis subsp. lactis)
- Crispr-associated protein csm4 (33 kDa, Protein from Lactococcus lactis subsp. lactis)
- Crispr-associated protein csm3 (23 kDa, Protein from Lactococcus lactis subsp. lactis)
- Crispr-associated protein cas10 (87 kDa, Protein from Lactococcus lactis subsp. lactis)