Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in pyraclostrobin-bound state
Resolution: 2.42 Å
EM Method: Single-particle
Fitted PDBs: 8yhq
Q-score: 0.599
Wang YX, Ye Y, Li ZW, Cui GR, Shi XX, Dong Y, Jiang JJ, Sun JY, Guan ZW, Zhang N, Wu QY, Wang F, Zhu XL, Yang GF
J Am Chem Soc (2024) 146 pp. 33903-33913 [ DOI: doi:10.1021/jacs.4c12595 Pubmed: 39601138 ]
- Cytochrome b-c1 complex subunit 9, mitochondrial (6 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 10, mitochondrial (5 kDa, Protein from Saccharomyces cerevisiae)
- Quinol--cytochrome-c reductase (27 kDa, Protein from Saccharomyces cerevisiae)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Qcr6 isoform 1 (8 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit rieske, mitochondrial (20 kDa, Protein from Saccharomyces cerevisiae)
- (5s,11r)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-4,6,10,12,16-pentaoxa-5,11-diphosphaoctadec-1-yl pentadecanoate (634 Da, Ligand)
- (1r)-2-{[(s)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl octadecanoate (593 Da, Ligand)
- (2r)-3-{[(s)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate (691 Da, Ligand)
- (1r)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate (592 Da, Ligand)
- Cytochrome b-c1 complex subunit 2, mitochondrial (38 kDa, Protein from Saccharomyces cerevisiae)
- Methyl ~{n}-[2-[[1-(4-chlorophenyl)pyrazol-3-yl]oxymethyl]phenyl]-~{n}-methoxy-carbamate (387 Da, Ligand)
- (1r)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate (564 Da, Ligand)
- Cytochrome b-c1 complex subunit 7 (14 kDa, Protein from Saccharomyces cerevisiae)
- 5-(3,7,11,15,19,23-hexamethyl-tetracosa-2,6,10,14,18,22-hexaenyl)-2,3-dimethoxy-6-methyl-benzene-1,4-diol (592 Da, Ligand)
- Cor1 isoform 1 (47 kDa, Protein from Saccharomyces cerevisiae)
- Saccharomyces cerevisiae bc1 complex (Complex from Saccharomyces cerevisiae)
- Cytochrome b (43 kDa, Protein from Saccharomyces cerevisiae)
- (2r,5s,11r,14r)-5,8,11-trihydroxy-2-(nonanoyloxy)-5,11-dioxido-16-oxo-14-[(propanoyloxy)methyl]-4,6,10,12,15-pentaoxa-5,11-diphosphanonadec-1-yl undecanoate (834 Da, Ligand)
- Cytochrome b-c1 complex subunit 8 (10 kDa, Protein from Saccharomyces cerevisiae)
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in YF23694-bound state
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 8yin
Q-score: 0.53
Wang YX, Ye Y, Li ZW, Cui GR, Shi XX, Dong Y, Jiang JJ, Sun JY, Guan ZW, Zhang N, Wu QY, Wang F, Zhu XL, Yang GF
J Am Chem Soc (2024) 146 pp. 33903-33913 [ Pubmed: 39601138 DOI: doi:10.1021/jacs.4c12595 ]
- (2r)-3-{[(s)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate (691 Da, Ligand)
- (5s,11r)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-4,6,10,12,16-pentaoxa-5,11-diphosphaoctadec-1-yl pentadecanoate (634 Da, Ligand)
- (1r)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate (592 Da, Ligand)
- Cytochrome b-c1 complex subunit 9, mitochondrial (6 kDa, Protein from Saccharomyces cerevisiae)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Cytochrome b (43 kDa, Protein from Saccharomyces cerevisiae)
- 1-[2-[(4,6-dimethyl-1,3-benzothiazol-2-yl)sulfanylmethyl]-3-methyl-phenyl]-4-methyl-1,2,3,4-tetrazol-5-one (397 Da, Ligand)
- Cryo-em structure of saccharomyces cerevisiae bc1 complex in yf23694-bound state (Complex from Saccharomyces cerevisiae)
- Cor1 isoform 1 (47 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 7 (14 kDa, Protein from Saccharomyces cerevisiae)
- Qcr6 isoform 1 (8 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit rieske, mitochondrial (20 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c1, heme protein, mitochondrial (27 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 2, mitochondrial (38 kDa, Protein from Saccharomyces cerevisiae)
- 5-(3,7,11,15,19,23-hexamethyl-tetracosa-2,6,10,14,18,22-hexaenyl)-2,3-dimethoxy-6-methyl-benzene-1,4-diol (592 Da, Ligand)
- Cytochrome b-c1 complex subunit 8 (10 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 10, mitochondrial (5 kDa, Protein from Saccharomyces cerevisiae)
- (1r)-2-{[(s)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl octadecanoate (593 Da, Ligand)
- (2r,5s,11r,14r)-5,8,11-trihydroxy-2-(nonanoyloxy)-5,11-dioxido-16-oxo-14-[(propanoyloxy)methyl]-4,6,10,12,15-pentaoxa-5,11-diphosphanonadec-1-yl undecanoate (834 Da, Ligand)
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in Metyltetraprole-bound state
Resolution: 2.52 Å
EM Method: Single-particle
Fitted PDBs: 8zmt
Q-score: 0.621
Wang YX, Ye Y, Li ZW, Cui GR, Shi XX, Dong Y, Jiang JJ, Sun JY, Guan ZW, Zhang N, Wu QY, Wang F, Zhu XL, Yang GF
J Am Chem Soc (2024) 146 pp. 33903-33913 [ Pubmed: 39601138 DOI: doi:10.1021/jacs.4c12595 ]
- (2r)-3-{[(s)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate (691 Da, Ligand)
- Cryo-em structure of saccharomyces cerevisiae bc1 complex in metyltetraprole-bound state (Complex from Saccharomyces cerevisiae)
- (5s,11r)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-4,6,10,12,16-pentaoxa-5,11-diphosphaoctadec-1-yl pentadecanoate (634 Da, Ligand)
- (1r)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate (592 Da, Ligand)
- Cytochrome b-c1 complex subunit 9, mitochondrial (6 kDa, Protein from Saccharomyces cerevisiae)
- 1-[2-[[1-(4-chlorophenyl)pyrazol-3-yl]oxymethyl]-3-methyl-phenyl]-4-methyl-1,2,3,4-tetrazol-5-one (396 Da, Ligand)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Cytochrome b (43 kDa, Protein from Saccharomyces cerevisiae)
- Cor1 isoform 1 (47 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 7 (14 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 6, mitochondrial (8 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit rieske, mitochondrial (20 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c1, heme protein, mitochondrial (27 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 2, mitochondrial (38 kDa, Protein from Saccharomyces cerevisiae)
- 5-(3,7,11,15,19,23-hexamethyl-tetracosa-2,6,10,14,18,22-hexaenyl)-2,3-dimethoxy-6-methyl-benzene-1,4-diol (592 Da, Ligand)
- Cytochrome b-c1 complex subunit 8 (10 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 10, mitochondrial (5 kDa, Protein from Saccharomyces cerevisiae)
- (1r)-2-{[(s)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl octadecanoate (593 Da, Ligand)
- (2r,5s,11r,14r)-5,8,11-trihydroxy-2-(nonanoyloxy)-5,11-dioxido-16-oxo-14-[(propanoyloxy)methyl]-4,6,10,12,15-pentaoxa-5,11-diphosphanonadec-1-yl undecanoate (834 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
III2IV respiratory supercomplex from Saccharomyces cerevisiae
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 9etz
Q-score: 0.639
Lobez AP, Wu F, Di Trani JM, Rubinstein JL, Oliveberg M, Brzezinski P, Moe A
Nat Commun (2024) 15 pp. 8241-8241 [ Pubmed: 39300056 DOI: doi:10.1038/s41467-024-52475-3 ]
- Iii2-iv respiratory supercomplex (Complex from Saccharomyces cerevisiae)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Cytochrome b-c1 complex subunit 1, mitochondrial (47 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b (43 kDa, Protein from Saccharomyces cerevisiae)
- Heme c (618 Da, Ligand)
- Cytochrome c oxidase subunit 12, mitochondrial (8 kDa, Protein from Saccharomyces cerevisiae)
- Water (18 Da, Ligand)
- Dinuclear copper ion (127 Da, Ligand)
- Cytochrome c oxidase subunit 26, mitochondrial (5 kDa, Protein from Saccharomyces cerevisiae)
- Di-palmitoyl-3-sn-phosphatidylethanolamine (691 Da, Ligand)
- Cytochrome c oxidase subunit 13, mitochondrial (13 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 6, mitochondrial (8 kDa, Protein from Saccharomyces cerevisiae)
- 1,2-diacyl-sn-glycero-3-phoshocholine (734 Da, Ligand)
- Cytochrome b-c1 complex subunit rieske, mitochondrial (20 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 10, mitochondrial (8 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 4, mitochondrial (12 kDa, Protein from Saccharomyces cerevisiae)
- Cardiolipin (1 kDa, Ligand)
- Cytochrome c oxidase subunit 1 (58 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 5a, mitochondrial (14 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 2, mitochondrial (38 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 8, mitochondrial (5 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c1, heme protein, mitochondrial (27 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 9, mitochondrial (6 kDa, Protein from Saccharomyces cerevisiae)
- Calcium ion (40 Da, Ligand)
- Copper (ii) ion (63 Da, Ligand)
- Cytochrome b-c1 complex subunit 9, mitochondrial (6 kDa, Protein from Saccharomyces cerevisiae)
- 5-(3,7,11,15,19,23-hexamethyl-tetracosa-2,6,10,14,18,22-hexaenyl)-2,3-dimethoxy-6-methyl-benzene-1,4-diol (592 Da, Ligand)
- Heme-a (852 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Cytochrome b-c1 complex subunit 8, mitochondrial (10 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 2 (26 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 3 (30 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 7, mitochondrial (6 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 6, mitochondrial (12 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 7, mitochondrial (14 kDa, Protein from Saccharomyces cerevisiae)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
III2IV2 respiratory supercomplex from Saccharomyces cerevisiae with 4 bound UQ6
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8e7s
Q-score: 0.312
Hryc CF, Mallampalli VKPS, Bovshik EI, Azinas S, Fan G, Serysheva II, Sparagna GC, Baker ML, Mileykovskaya E, Dowhan W
Nat Commun (2023) 14 pp. 2783-2783 [ Pubmed: 37188665 DOI: doi:10.1038/s41467-023-38441-5 ]
- Cytochrome c oxidase subunit 26, mitochondrial (7 kDa, Protein from Saccharomyces cerevisiae)
- (5s,11r)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-4,6,10,12,16-pentaoxa-5,11-diphosphaoctadec-1-yl pentadecanoate (634 Da, Ligand)
- Cytochrome c oxidase subunit 13, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 4, mitochondrial (17 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 10, mitochondrial (8 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 2, mitochondrial (40 kDa, Protein from Saccharomyces cerevisiae)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Cytochrome c oxidase subunit 12, mitochondrial (9 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit rieske, mitochondrial (23 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c1, heme protein, mitochondrial (34 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b (43 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 9, mitochondrial (6 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 6, mitochondrial (17 kDa, Protein from Saccharomyces cerevisiae)
- Dinuclear copper ion (127 Da, Ligand)
- Di-palmitoyl-3-sn-phosphatidylethanolamine (691 Da, Ligand)
- Cytochrome b-c1 complex subunit 7, mitochondrial (14 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 6, mitochondrial (17 kDa, Protein from Saccharomyces cerevisiae)
- 1,2-diacyl-sn-glycero-3-phoshocholine (734 Da, Ligand)
- Cytochrome c oxidase subunit 7, mitochondrial (6 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 9, mitochondrial (7 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 8, mitochondrial (8 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 2 (28 kDa, Protein from Saccharomyces cerevisiae)
- Cardiolipin (1 kDa, Ligand)
- Cytochrome c oxidase subunit 1 (58 kDa, Protein from Saccharomyces cerevisiae)
- Copper (ii) ion (63 Da, Ligand)
- Cytochrome b-c1 complex subunit 1, mitochondrial (50 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 5a, mitochondrial (17 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 8, mitochondrial (10 kDa, Protein from Saccharomyces cerevisiae)
- 5-(3,7,11,15,19,23-hexamethyl-tetracosa-2,6,10,14,18,22-hexaenyl)-2,3-dimethoxy-6-methyl-benzene-1,4-diol (592 Da, Ligand)
- Heme-a (852 Da, Ligand)
- Iii2-iv2 mitochondrial respiratory supercomplex (Complex from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 3 (30 kDa, Protein from Saccharomyces cerevisiae)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
III2IV respiratory supercomplex from Saccharomyces cerevisiae cardiolipin-lacking mutant
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8ec0
Q-score: 0.307
Hryc CF, Mallampalli VKPS, Bovshik EI, Azinas S, Fan G, Serysheva II, Sparagna GC, Baker ML, Mileykovskaya E, Dowhan W
Nat Commun (2023) 14 pp. 2783-2783 [ Pubmed: 37188665 DOI: doi:10.1038/s41467-023-38441-5 ]
- Cytochrome c oxidase subunit 26, mitochondrial (7 kDa, Protein from Saccharomyces cerevisiae)
- (1s)-2-{[{[(2r)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl stearate (751 Da, Ligand)
- Cytochrome c oxidase subunit 13, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 4, mitochondrial (17 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 2, mitochondrial (40 kDa, Protein from Saccharomyces cerevisiae)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Cytochrome c oxidase subunit 12, mitochondrial (9 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit rieske, mitochondrial (23 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c1, heme protein, mitochondrial (34 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b (43 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 9, mitochondrial (6 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 6, mitochondrial (17 kDa, Protein from Saccharomyces cerevisiae)
- Dinuclear copper ion (127 Da, Ligand)
- Di-palmitoyl-3-sn-phosphatidylethanolamine (691 Da, Ligand)
- Cytochrome b-c1 complex subunit 7, mitochondrial (14 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 6, mitochondrial (17 kDa, Protein from Saccharomyces cerevisiae)
- 1,2-diacyl-sn-glycero-3-phoshocholine (734 Da, Ligand)
- Cytochrome c oxidase subunit 7, mitochondrial (6 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 9, mitochondrial (7 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 8, mitochondrial (8 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 2 (28 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 1 (58 kDa, Protein from Saccharomyces cerevisiae)
- Copper (ii) ion (63 Da, Ligand)
- Cytochrome b-c1 complex subunit 1, mitochondrial (50 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome c oxidase subunit 5a, mitochondrial (17 kDa, Protein from Saccharomyces cerevisiae)
- Cytochrome b-c1 complex subunit 8, mitochondrial (10 kDa, Protein from Saccharomyces cerevisiae)
- 5-(3,7,11,15,19,23-hexamethyl-tetracosa-2,6,10,14,18,22-hexaenyl)-2,3-dimethoxy-6-methyl-benzene-1,4-diol (592 Da, Ligand)
- Iii2-iv mitochondrial respiratory supercomplex (Complex from Saccharomyces cerevisiae)
- Heme-a (852 Da, Ligand)
- Cytochrome c oxidase subunit 3 (30 kDa, Protein from Saccharomyces cerevisiae)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8bq6
Q-score: 0.628
Klusch N, Dreimann M, Senkler J, Rugen N, Kuhlbrandt W, Braun HP
Nat Plants (2023) 9 pp. 142-156 [ DOI: doi:10.1038/s41477-022-01308-6 Pubmed: 36585502 ]
- 2,3-dimethoxy-5-methyl-6-(3,11,15,19-tetramethyl-eicosa-2,6,10,14,18-pentaenyl)-[1,4]benzoquinone (522 Da, Ligand)
- B15 -- 1 beta subcomplex subunit 4 (8 kDa, Protein from Arabidopsis thaliana)
- At3g07480.1 (17 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-b (11 kDa, Protein from Arabidopsis thaliana)
- Uncharacterized protein at2g27730, mitochondrial (11 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit rieske-1, mitochondrial (29 kDa, Protein from Arabidopsis thaliana)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Uncharacterized protein at1g67785 (7 kDa, Protein from Arabidopsis thaliana)
- Gamma carbonic anhydrase 2, mitochondrial (30 kDa, Protein from Arabidopsis thaliana)
- Acyl carrier protein 1, mitochondrial (13 kDa, Protein from Arabidopsis thaliana)
- Ubiquinone-7 (658 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (12 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-a (16 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 4 (55 kDa, Protein from Arabidopsis thaliana)
- Mitochondrial arabidopsis thaliana i+iii2 supercomplex (complete conformation 2 composition) (Complex from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (17 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (15 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (7 kDa, Protein from Arabidopsis thaliana)
- Gamma carbonic anhydrase-like 2, mitochondrial (27 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 10, mitochondrial (5 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 3 (22 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 5 (74 kDa, Protein from Arabidopsis thaliana)
- Probable nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial (19 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 1 (36 kDa, Protein from Arabidopsis thaliana)
- Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial (54 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (13 kDa, Protein from Arabidopsis thaliana)
- Crotonyl coenzyme a (835 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (10 kDa, Protein from Arabidopsis thaliana)
- Cytochrome c1 2, heme protein, mitochondrial (33 kDa, Protein from Arabidopsis thaliana)
- Iron/sulfur cluster (351 Da, Ligand)
- Fe (iii) ion (55 Da, Ligand)
- Cytochrome b-c1 complex subunit 9, mitochondrial (8 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (53 kDa, Protein from Arabidopsis thaliana)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-b (12 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b (44 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (43 kDa, Protein from Arabidopsis thaliana)
- At4g16450 (11 kDa, Protein from Arabidopsis thaliana)
- Ubiquinone-9 (795 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (28 kDa, Protein from Arabidopsis thaliana)
- S-[2-({n-[(2r)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate (540 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (24 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 8-1, mitochondrial (8 kDa, Protein from Arabidopsis thaliana)
- At2g46540/f11c10.23 (6 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 (7 kDa, Protein from Arabidopsis thaliana)
- Outer envelope pore protein 16-3, chloroplastic/mitochondrial (17 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 2 (45 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 5-b (9 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 7-2, mitochondrial (14 kDa, Protein from Arabidopsis thaliana)
- Acyl carrier protein 2, mitochondrial (14 kDa, Protein from Arabidopsis thaliana)
- Excitatory amino acid transporter (9 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 6-1, mitochondrial (7 kDa, Protein from Arabidopsis thaliana)
- Flavin mononucleotide (456 Da, Ligand)
- Nadh dehydrogenase subunit 4l (11 kDa, Protein from Arabidopsis thaliana)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (11 kDa, Protein from Arabidopsis thaliana)
- Probable mitochondrial-processing peptidase subunit beta, mitochondrial (59 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 8-a, mitochondrial (25 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial (81 kDa, Protein from Arabidopsis thaliana)
- Gamma carbonic anhydrase 1, mitochondrial (30 kDa, Protein from Arabidopsis thaliana)
- P1 (11 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 6 (23 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 3 (13 kDa, Protein from Arabidopsis thaliana)
- Transmembrane protein (9 kDa, Protein from Arabidopsis thaliana)
- Probable nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (18 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-a (8 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (13 kDa, Protein from Arabidopsis thaliana)
- Esss subunit of nadh:ubiquinone oxidoreductase (complex i) protein (12 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 2 (55 kDa, Protein from Arabidopsis thaliana)
Resolution: 2.73 Å
EM Method: Single-particle
Fitted PDBs: 8bq5
Q-score: 0.642
Klusch N, Dreimann M, Senkler J, Rugen N, Kuhlbrandt W, Braun HP
Nat Plants (2023) 9 pp. 142-156 [ DOI: doi:10.1038/s41477-022-01308-6 Pubmed: 36585502 ]
- Cytochrome b-c1 complex subunit 7-2, mitochondrial (14 kDa, Protein from Arabidopsis thaliana)
- Excitatory amino acid transporter (9 kDa, Protein from Arabidopsis thaliana)
- Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial (54 kDa, Protein from Arabidopsis thaliana)
- At3g07480.1 (17 kDa, Protein from Arabidopsis thaliana)
- Transmembrane protein (9 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial (81 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit rieske-1, mitochondrial (29 kDa, Protein from Arabidopsis thaliana)
- Mitochondrial arabidopsis thaliana i+iii2 supercomplex (complete conformation 1 composition) (Complex from Arabidopsis thaliana)
- Gamma carbonic anhydrase 2, mitochondrial (30 kDa, Protein from Arabidopsis thaliana)
- Esss subunit of nadh:ubiquinone oxidoreductase (complex i) protein (12 kDa, Protein from Arabidopsis thaliana)
- B15 -- 1 beta subcomplex subunit 4 (8 kDa, Protein from Arabidopsis thaliana)
- Probable mitochondrial-processing peptidase subunit beta, mitochondrial (59 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (11 kDa, Protein from Arabidopsis thaliana)
- Zinc ion (65 Da, Ligand)
- Outer envelope pore protein 16-3, chloroplastic/mitochondrial (17 kDa, Protein from Arabidopsis thaliana)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Nadh-ubiquinone oxidoreductase chain 2 (55 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (28 kDa, Protein from Arabidopsis thaliana)
- At2g46540/f11c10.23 (6 kDa, Protein from Arabidopsis thaliana)
- Acyl carrier protein 1, mitochondrial (13 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-a (8 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 9, mitochondrial (8 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (15 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 2 (45 kDa, Protein from Arabidopsis thaliana)
- Probable nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial (19 kDa, Protein from Arabidopsis thaliana)
- Uncharacterized protein at1g67785 (7 kDa, Protein from Arabidopsis thaliana)
- 2,3-dimethoxy-5-methyl-6-(3,11,15,19-tetramethyl-eicosa-2,6,10,14,18-pentaenyl)-[1,4]benzoquinone (522 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-b (11 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 8-1, mitochondrial (8 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 6 (23 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (17 kDa, Protein from Arabidopsis thaliana)
- Gamma carbonic anhydrase-like 2, mitochondrial (27 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 3 (13 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (7 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 5 (74 kDa, Protein from Arabidopsis thaliana)
- Probable nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (18 kDa, Protein from Arabidopsis thaliana)
- Gamma carbonic anhydrase 1, mitochondrial (30 kDa, Protein from Arabidopsis thaliana)
- P1 (11 kDa, Protein from Arabidopsis thaliana)
- Ubiquinone-9 (795 Da, Ligand)
- Fe (iii) ion (55 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 3 (22 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (10 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (43 kDa, Protein from Arabidopsis thaliana)
- Crotonyl coenzyme a (835 Da, Ligand)
- S-[2-({n-[(2r)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate (540 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 (7 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (24 kDa, Protein from Arabidopsis thaliana)
- At4g16450 (11 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-a (16 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b (44 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 5-b (9 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase subunit 4l (11 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (13 kDa, Protein from Arabidopsis thaliana)
- Cytochrome c1 2, heme protein, mitochondrial (33 kDa, Protein from Arabidopsis thaliana)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Cytochrome b-c1 complex subunit 10, mitochondrial (5 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-b (12 kDa, Protein from Arabidopsis thaliana)
- Iron/sulfur cluster (351 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (53 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (12 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 6-1, mitochondrial (7 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 8-a, mitochondrial (25 kDa, Protein from Arabidopsis thaliana)
- Flavin mononucleotide (456 Da, Ligand)
- Nadh-ubiquinone oxidoreductase chain 4 (55 kDa, Protein from Arabidopsis thaliana)
- Ubiquinone-7 (658 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (13 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 1 (36 kDa, Protein from Arabidopsis thaliana)
- Uncharacterized protein at2g27730, mitochondrial (11 kDa, Protein from Arabidopsis thaliana)
- Acyl carrier protein 2, mitochondrial (14 kDa, Protein from Arabidopsis thaliana)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete composition)
Resolution: 2.09 Å
EM Method: Single-particle
Fitted PDBs: 8bpx
Q-score: 0.707
Klusch N, Dreimann M, Senkler J, Rugen N, Kuhlbrandt W, Braun HP
Nat Plants (2023) 9 pp. 142-156 [ DOI: doi:10.1038/s41477-022-01308-6 Pubmed: 36585502 ]
- Phosphatidylethanolamine (734 Da, Ligand)
- Cytochrome b-c1 complex subunit rieske-1, mitochondrial (29 kDa, Protein from Arabidopsis thaliana)
- Esss subunit of nadh:ubiquinone oxidoreductase (complex i) protein (12 kDa, Protein from Arabidopsis thaliana)
- Probable mitochondrial-processing peptidase subunit beta, mitochondrial (59 kDa, Protein from Arabidopsis thaliana)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (28 kDa, Protein from Arabidopsis thaliana)
- Acyl carrier protein 1, mitochondrial (13 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 2 (45 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-b (11 kDa, Protein from Arabidopsis thaliana)
- Cardiolipin (1 kDa, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (10 kDa, Protein from Arabidopsis thaliana)
- S-[2-({n-[(2r)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate (540 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 (7 kDa, Protein from Arabidopsis thaliana)
- At4g16450 (11 kDa, Protein from Arabidopsis thaliana)
- (7s)-4-hydroxy-n,n,n-trimethyl-9-oxo-7-[(palmitoyloxy)methyl]-3,5,8-trioxa-4-phosphahexacosan-1-aminium 4-oxide (763 Da, Ligand)
- Nadh-ubiquinone oxidoreductase chain 4 (55 kDa, Protein from Arabidopsis thaliana)
- Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial (54 kDa, Protein from Arabidopsis thaliana)
- Acyl carrier protein 2, mitochondrial (14 kDa, Protein from Arabidopsis thaliana)
- Outer envelope pore protein 16-3, chloroplastic/mitochondrial (17 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 2 (55 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 9, mitochondrial (8 kDa, Protein from Arabidopsis thaliana)
- 1,2-diacyl-glycerol-3-sn-phosphate (704 Da, Ligand)
- Nadh-ubiquinone oxidoreductase chain 6 (23 kDa, Protein from Arabidopsis thaliana)
- Mitochondrial arabidopsis thaliana i+iii2 supercomplex (complete composition) (Complex from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (7 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 5 (74 kDa, Protein from Arabidopsis thaliana)
- Fe (iii) ion (55 Da, Ligand)
- 2-{[(4-o-alpha-d-glucopyranosyl-alpha-d-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25r)-spirost-5-en-3-yl]oxy}butyl 4-o-alpha-d-glucopyranosyl-alpha-d-glucopyranoside (1 kDa, Ligand)
- Nadh-ubiquinone oxidoreductase chain 4l (11 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-a (16 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b (44 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-b (12 kDa, Protein from Arabidopsis thaliana)
- Iron/sulfur cluster (351 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (53 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (12 kDa, Protein from Arabidopsis thaliana)
- Flavin mononucleotide (456 Da, Ligand)
- Excitatory amino acid transporter (9 kDa, Protein from Arabidopsis thaliana)
- (1s)-2-{[{[(2r)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl stearate (751 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (11 kDa, Protein from Arabidopsis thaliana)
- At2g46540/f11c10.23 (6 kDa, Protein from Arabidopsis thaliana)
- 2,3-dimethoxy-5-methyl-6-(3,11,15,19-tetramethyl-eicosa-2,6,10,14,18-pentaenyl)-[1,4]benzoquinone (522 Da, Ligand)
- Cytochrome b-c1 complex subunit 8-1, mitochondrial (8 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (17 kDa, Protein from Arabidopsis thaliana)
- Gamma carbonic anhydrase 1, mitochondrial (30 kDa, Protein from Arabidopsis thaliana)
- Ubiquinone-9 (795 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 3 (22 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (43 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 5-b (9 kDa, Protein from Arabidopsis thaliana)
- Cytochrome c1 2, heme protein, mitochondrial (33 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 10, mitochondrial (5 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 8-a, mitochondrial (25 kDa, Protein from Arabidopsis thaliana)
- Ubiquinone-7 (658 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (13 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 1 (36 kDa, Protein from Arabidopsis thaliana)
- Uncharacterized protein at2g27730, mitochondrial (11 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 7-2, mitochondrial (14 kDa, Protein from Arabidopsis thaliana)
- Transmembrane protein (9 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial (81 kDa, Protein from Arabidopsis thaliana)
- Gamma carbonic anhydrase 2, mitochondrial (30 kDa, Protein from Arabidopsis thaliana)
- Zinc ion (65 Da, Ligand)
- 2fe-2s ferredoxin-like superfamily protein (17 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-a (8 kDa, Protein from Arabidopsis thaliana)
- Water (18 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (15 kDa, Protein from Arabidopsis thaliana)
- Probable nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial (19 kDa, Protein from Arabidopsis thaliana)
- Uncharacterized protein at1g67785 (7 kDa, Protein from Arabidopsis thaliana)
- At2g31490 protein (8 kDa, Protein from Arabidopsis thaliana)
- Gamma carbonic anhydrase-like 2, mitochondrial (27 kDa, Protein from Arabidopsis thaliana)
- Nadh-ubiquinone oxidoreductase chain 3 (13 kDa, Protein from Arabidopsis thaliana)
- Probable nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (18 kDa, Protein from Arabidopsis thaliana)
- Crotonyl coenzyme a (835 Da, Ligand)
- At1g67350 (11 kDa, Protein from Arabidopsis thaliana)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (24 kDa, Protein from Arabidopsis thaliana)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (13 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 6-1, mitochondrial (7 kDa, Protein from Arabidopsis thaliana)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (CIII membrane domain)
Resolution: 2.25 Å
EM Method: Single-particle
Fitted PDBs: 8bel
Q-score: 0.682
Klusch N, Dreimann M, Senkler J, Rugen N, Kuhlbrandt W, Braun HP
Nat Plants (2023) 9 pp. 142-156 [ DOI: doi:10.1038/s41477-022-01308-6 Pubmed: 36585502 ]
- (1s)-2-{[{[(2r)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl stearate (751 Da, Ligand)
- Phosphatidylethanolamine (734 Da, Ligand)
- Cytochrome b-c1 complex subunit rieske-1, mitochondrial (29 kDa, Protein from Arabidopsis thaliana)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Cytochrome b-c1 complex subunit 9, mitochondrial (8 kDa, Protein from Arabidopsis thaliana)
- Water (18 Da, Ligand)
- 1,2-diacyl-glycerol-3-sn-phosphate (704 Da, Ligand)
- 2,3-dimethoxy-5-methyl-6-(3,11,15,19-tetramethyl-eicosa-2,6,10,14,18-pentaenyl)-[1,4]benzoquinone (522 Da, Ligand)
- Cytochrome b-c1 complex subunit 8-1, mitochondrial (8 kDa, Protein from Arabidopsis thaliana)
- Cardiolipin (1 kDa, Ligand)
- 2-{[(4-o-alpha-d-glucopyranosyl-alpha-d-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25r)-spirost-5-en-3-yl]oxy}butyl 4-o-alpha-d-glucopyranosyl-alpha-d-glucopyranoside (1 kDa, Ligand)
- Cytochrome b (44 kDa, Protein from Arabidopsis thaliana)
- Cytochrome c1 2, heme protein, mitochondrial (33 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 10, mitochondrial (5 kDa, Protein from Arabidopsis thaliana)
- Cytochrome b-c1 complex subunit 6-1, mitochondrial (7 kDa, Protein from Arabidopsis thaliana)
- (7s)-4-hydroxy-n,n,n-trimethyl-9-oxo-7-[(palmitoyloxy)methyl]-3,5,8-trioxa-4-phosphahexacosan-1-aminium 4-oxide (763 Da, Ligand)
- Ubiquinone-7 (658 Da, Ligand)
- Mitochondrial arabidopsis thaliana i+iii2 supercomplex (ciii membrane domain) (Complex from Arabidopsis thaliana)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)