Cytochrome c oxidase from Schizosaccharomyces pombe
Resolution: 3.36 Å
EM Method: Single-particle
Fitted PDBs: 8c8q
Q-score: 0.525
Moe A, Adelroth P, Brzezinski P, Nasvik Ojemyr L
Commun Chem (2023) 6 pp. 32-32 [ DOI: doi:10.1038/s42004-023-00827-3 Pubmed: 36797353 ]
- Cytochrome c oxidase polypeptide 5, mitochondrial (24 kDa, Protein from Schizosaccharomyces pombe)
- Zinc ion (65 Da, Ligand)
- Cytochrome c oxidase subunit 4, mitochondrial (17 kDa, Protein from Schizosaccharomyces pombe)
- Dinuclear copper ion (127 Da, Ligand)
- Di-palmitoyl-3-sn-phosphatidylethanolamine (691 Da, Ligand)
- Respiratory supercomplex factor 2 homolog c1565.01 (27 kDa, Protein from Schizosaccharomyces pombe)
- Cytochrome c oxidase (246 kDa, Complex from Schizosaccharomyces pombe)
- Cytochrome c oxidase polypeptide viii, mitochondrial (7 kDa, Protein from Schizosaccharomyces pombe)
- Cytochrome c oxidase subunit 6, mitochondrial (15 kDa, Protein from Schizosaccharomyces pombe)
- Cytochrome c oxidase subunit 12, mitochondrial (10 kDa, Protein from Schizosaccharomyces pombe)
- Calcium ion (40 Da, Ligand)
- Copper (ii) ion (63 Da, Ligand)
- Cytochrome c oxidase subunit 7 (6 kDa, Protein from Schizosaccharomyces pombe)
- Heme-a (852 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Cytochrome c oxidase subunit 9, mitochondrial (6 kDa, Protein from Schizosaccharomyces pombe)
- Unknown polypeptide (2 kDa, Protein from Schizosaccharomyces pombe)
- Cytochrome c oxidase subunit 13, mitochondrial (15 kDa, Protein from Schizosaccharomyces pombe)
- Cytochrome c oxidase subunit 1 (59 kDa, Protein from Schizosaccharomyces pombe)
- Cytochrome c oxidase subunit 2 (28 kDa, Protein from Schizosaccharomyces pombe)
- Cytochrome c oxidase subunit 3 (30 kDa, Protein from Schizosaccharomyces pombe)
Structure of a functional obligate respiratory supercomplex from Mycobacterium smegmatis
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6hwh
Q-score: 0.5
Wiseman B, Nitharwal RG, Fedotovskaya O, Schafer J, Guo H, Kuang Q, Benlekbir S, Sjostrand D, Adelroth P, Rubinstein JL, Brzezinski P, Hogbom M
Nat Struct Mol Biol (2018) 25 pp. 1128-1136 [ Pubmed: 30518849 DOI: doi:10.1038/s41594-018-0160-3 ]
- Cytochrome bc1 complex cytochrome c subunit (27 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
- Heme c (618 Da, Ligand)
- Uncharacterized protein msmeg_4692/msmei_4575 (15 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Cardiolipin (1 kDa, Ligand)
- Ubiquinol-cytochrome c reductase iron-sulfur subunit (44 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
- Cytochrome c oxidase polypeptide 4 (15 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
- Menaquinone-9 (785 Da, Ligand)
- Ubiquinol-cytochrome c reductase qcrb (61 kDa, Protein from Mycobacterium smegmatis MC2 155)
- Cytochrome c oxidase subunit 3 (22 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
- Heme-as (920 Da, Ligand)
- Co-purified unknown peptide built as polyala (2 kDa, Protein from Mycobacterium smegmatis MC2 155)
- Msmeg_4693 (8 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
- Copper (ii) ion (63 Da, Ligand)
- Co-purified unknown transmembrane helices built as polyala (5 kDa, Protein from Mycobacterium smegmatis MC2 155)
- Co-purified unknown transmembrane helices built as polyala (6 kDa, Protein from Mycobacterium smegmatis MC2 155)
- Respiratory supercomplex from mycobacterium smegmatis (770 kDa, Complex from Mycobacterium smegmatis str. MC2 155)
- Cytochrome c oxidase subunit 1 (64 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
- Co-purified unknown peptide built as polyala (1 kDa, Protein from Mycobacterium smegmatis MC2 155)
- Cytochrome c oxidase subunit 2 (38 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))