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sample_name:"DNA-directed RNA polymerase II subunit RPB11"
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RNA polymerase II bound to Alu RNA right arm

RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, 20 bp upstream

Release date: Dec. 18, 2024
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9eh1
Q-score: 0.237

Markert JW, Soffers JH, Farnung L

Science (2024) pp. eadn6319-eadn6319 [ DOI: doi:10.1126/science.adn6319 Pubmed: 39666822 ]

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RNA polymerase II bound to minimal Alu RNA right arm in the alternative conformation

PolII-TCR-STK19 structure.

Release date: Dec. 4, 2024
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9er2
Q-score: 0.448

van den Heuvel D, Rodriguez-Martinez M, van der Meer PJ, Nieto Moreno N, Park J, Kim HS, van Schie JJM, Wondergem AP, D'Souza A, Yakoub G, Herlihy AE, Kashyap K, Boissiere T, Walker J, Mitter R, Apelt K, de Lint K, Kirdok I, Ljungman M, Wolthuis RMF, Cramer P, Scharer OD, Kokic G, Svejstrup JQ, Luijsterburg MS

Cell (2024) 187 pp. 7107- [ Pubmed: 39547229 DOI: doi:10.1016/j.cell.2024.10.018 ]

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Structure of Pol II-TC-NER-STK19 complex, consensus map

Release date: Nov. 13, 2024
Resolution: 4.2 Å
EM Method: Single-particle

Ramadhin AR, Lee SH, Zhou D, Salmazo A, Gonzalo-Hansen C, van Sluis M, Blom CMA, Janssens RC, Raams A, Dekkers D, Bezstarosti K, Slade D, Vermeulen W, Pines A, Demmers JAA, Bernecky C, Sixma TK, Marteijn JA

Mol Cell (2024) 84 pp. 4740-4757.e12 [ DOI: doi:10.1016/j.molcel.2024.10.030 Pubmed: 39547223 ]

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Structure of Pol II-TC-NER-STK19 complex, focused on Pol II-ELOF1

Release date: Nov. 13, 2024
Resolution: 3.0 Å
EM Method: Single-particle

Ramadhin AR, Lee SH, Zhou D, Salmazo A, Gonzalo-Hansen C, van Sluis M, Blom CMA, Janssens RC, Raams A, Dekkers D, Bezstarosti K, Slade D, Vermeulen W, Pines A, Demmers JAA, Bernecky C, Sixma TK, Marteijn JA

Mol Cell (2024) 84 pp. 4740-4757.e12 [ Pubmed: 39547223 DOI: doi:10.1016/j.molcel.2024.10.030 ]

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Structure of Pol II-TC-NER-STK19 complex, composite map

Release date: Nov. 13, 2024
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 9fd2
Q-score: 0.436

Ramadhin AR, Lee SH, Zhou D, Salmazo A, Gonzalo-Hansen C, van Sluis M, Blom CMA, Janssens RC, Raams A, Dekkers D, Bezstarosti K, Slade D, Vermeulen W, Pines A, Demmers JAA, Bernecky C, Sixma TK, Marteijn JA

Mol Cell (2024) 84 pp. 4740- [ Pubmed: 39547223 DOI: doi:10.1016/j.molcel.2024.10.030 ]

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Structure of Sen1 bound RNA Polymerase II pre-termination complex

Release date: Oct. 30, 2024
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8ram
Q-score: 0.394

Rengachari S, Hainthaler T, Oberthuer C, Lidschreiber M, Cramer P

Nat Struct Mol Biol (2024) [ Pubmed: 39424994 DOI: doi:10.1038/s41594-024-01409-0 ]

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Structure of Sen1-ADP.BeF3 bound RNA Polymerase II pre-termination complex

Release date: Oct. 30, 2024
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 8rap
Q-score: 0.24

Rengachari S, Hainthaler T, Oberthuer C, Lidschreiber M, Cramer P

Nat Struct Mol Biol (2024) [ DOI: doi:10.1038/s41594-024-01409-0 Pubmed: 39424994 ]

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consensus map of PICdeltaTFIIK form2

Release date: Oct. 30, 2024
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 8umh
Q-score: 0.081

Yang C, Murakami K

To Be Published

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