Cryo-EM structure of Dengue virus serotype 2 complexed with Fab SIgN-3C at pH 6.5
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 7bub
Q-score: 0.376
Zhang S, Loy T, Ng TS, Lim XN, Chew SV, Tan TY, Xu M, Kostyuchenko VA, Tukijan F, Shi J, Fink K, Lok SM
Cell Rep (2020) 31 pp. 107584-107584 [ Pubmed: 32348755 DOI: doi:10.1016/j.celrep.2020.107584 ]
- Dengue virus serotype 2 m protein (8 kDa, Protein from Dengue virus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Dengue virus serotype2 e protein (54 kDa, Protein from Dengue virus 2)
- Sign-3c fab heavy chain (14 kDa, Protein from Homo sapiens)
- Dengue virus serotype 2 (Complex)
- Sign-3c fab (Complex from Dengue virus 2)
- Sign-3c fab light chain (11 kDa, Protein from Homo sapiens)
- Complex of dengue virus serotype 2 with sign-3c fab (Complex from Homo sapiens)
Cryo-EM structure of Dengue virus serotype 2 complexed with Fab SIgN-3C at pH 8.0
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 7bud
Q-score: 0.334
Zhang S, Loy T, Ng TS, Lim XN, Chew SV, Tan TY, Xu M, Kostyuchenko VA, Tukijan F, Shi J, Fink K, Lok SM
Cell Rep (2020) 31 pp. 107584-107584 [ Pubmed: 32348755 DOI: doi:10.1016/j.celrep.2020.107584 ]
- Dengue virus serotype 2 m protein (8 kDa, Protein from Dengue virus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Dengue virus serotype 2 e protein (54 kDa, Protein from Dengue virus 2)
- Sign-3c fab heavy chain (14 kDa, Protein from Homo sapiens)
- Dengue virus serotype 2 (Complex)
- Sign-3c fab (Complex from Dengue virus 2)
- Sign-3c fab light chain (11 kDa, Protein from Homo sapiens)
- Complex of dengue virus serotype 2 with sign-3c fab (Complex from Homo sapiens)
Cryo-EM structure of Dengue virus serotype 2 complexed with Fab SIgN-3C at pH 5.0
Resolution: 7.8 Å
EM Method: Single-particle
Fitted PDBs: 7bue
Q-score: 0.129
Zhang S, Loy T, Ng TS, Lim XN, Chew SV, Tan TY, Xu M, Kostyuchenko VA, Tukijan F, Shi J, Fink K, Lok SM
Cell Rep (2020) 31 pp. 107584-107584 [ Pubmed: 32348755 DOI: doi:10.1016/j.celrep.2020.107584 ]
- Dengue serotype 2 e protein ectodomain (43 kDa, Protein from Dengue virus 2)
- Sign-3c fab heavy chain (14 kDa, Protein from Homo sapiens)
- Dengue virus serotype 2 (Complex)
- Sign-3c fab (Complex from Dengue virus 2)
- Sign-3c fab light chain (11 kDa, Protein from Homo sapiens)
- Complex of dengue virus serotype 2 with sign-3c fab (Complex from Homo sapiens)
Cryo-EM structure of Dengue virus serotype 2 complexed with SIgN-3C IgG
Resolution: 6.1 Å
EM Method: Single-particle
Fitted PDBs: 7buf
Q-score: 0.157
Zhang S, Loy T, Ng TS, Lim XN, Chew SV, Tan TY, Xu M, Kostyuchenko VA, Tukijan F, Shi J, Fink K, Lok SM
Cell Rep (2020) 31 pp. 107584-107584 [ Pubmed: 32348755 DOI: doi:10.1016/j.celrep.2020.107584 ]
- Dengue virus serotype 2 m protein (8 kDa, Protein from Dengue virus 2)
- Sign-3c igg (Complex from Dengue virus 2)
- Sign-3c igg heavy chain (14 kDa, Protein from Homo sapiens)
- Dengue virus serotype 2 e protein (54 kDa, Protein from Dengue virus 2)
- Sign-3c igg light chain (11 kDa, Protein from Homo sapiens)
- Complex of dengue virus serotype 2 with sign-3c igg (Complex from Homo sapiens)
- Dengue virus serotype 2 (Complex)