Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9bsv
Q-score: 0.536
Bu F, Ye G, Morsheimer K, Mendoza A, Turner-Hubbard H, Herbst M, Spiller B, Wadzinski BE, Eaton B, Anantpadma M, Yang G, Liu B, Davey R, Li F
PLoS Pathog (2024) 20 pp. e1012817-e1012817 [ DOI: doi:10.1371/journal.ppat.1012817 Pubmed: 39715280 ]
- Ebov gp/nanosota-eb2 complex (Complex)
- Nanosota-eb2 (15 kDa, Protein from Vicugna pacos)
- Nanosota-eb2 (Complex from Vicugna pacos)
- Envelope glycoprotein (77 kDa, Protein from Ebola virus)
- Ebov glycoprotein (Complex from Ebola virus)
- Alpha-d-mannopyranose (180 Da, Ligand)
Structure of EBOV GP lacking the mucin-like domain with 2.1.1D5 scFv and 6D6 scFv bound
Resolution: 2.53 Å
EM Method: Single-particle
Fitted PDBs: 8dpl
Q-score: 0.536
Yu X, Hastie KM, Davis CW, Avalos RD, Williams D, Parekh D, Hui S, Mann C, Hariharan C, Takada A, Ahmed R, Saphire EO
Cell Rep (2023) 42 pp. 113366-113366 [ DOI: doi:10.1016/j.celrep.2023.113366 Pubmed: 37938974 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- 2.1.1d5 light chain variable domain (11 kDa, Protein from Homo sapiens)
- 6d6 single-chain variable fragment (25 kDa, Protein from Mus musculus)
- Glycoprotein gp1 (31 kDa, Protein from Ebola virus - Mayinga, Zaire, 1976)
- Structure of ebov gp in complex with 2.1.1d5 scfv and 6d6 scfv (Complex from Ebola virus - Mayinga, Zaire, 1976)
- Glycoprotein gp2 (15 kDa, Protein from Ebola virus - Mayinga, Zaire, 1976)
- 2.1.1d5 heavy chain variable domain (13 kDa, Protein from Homo sapiens)
Structure of ZEBOV GP in complex with 5T0180 antibody
Resolution: 2.91 Å
EM Method: Single-particle
Fitted PDBs: 6s8j
Q-score: 0.554
Cohen-Dvashi H, Zehner M, Ehrhardt S, Katz M, Elad N, Klein F, Diskin R
Cell Host Microbe (2020) 27 pp. 418-427.e4 [ DOI: doi:10.1016/j.chom.2020.01.007 Pubmed: 32059794 ]
- Envelope glycoprotein (18 kDa, Protein from Ebola virus)
- 5t0180 antibody (Complex from Homo sapiens)
- Heavy chain (24 kDa, Protein from Homo sapiens)
- Ebov-gp (Complex from Ebola virus)
- Light chain (23 kDa, Protein from Homo sapiens)
- Envelope glycoprotein 1 (35 kDa, Protein from Ebola virus)
- Water (18 Da, Ligand)
- Ebov-gp in complex with 3t0265 antibody (Complex)
EM structure of a EBOV-GP bound to 3T0331 neutralizing antibody
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6qd7
Q-score: 0.386
Ehrhardt SA, Zehner M, Krahling V, Cohen-Dvashi H, Kreer C, Elad N, Gruell H, Ercanoglu MS, Schommers P, Gieselmann L, Eggeling R, Dahlke C, Wolf T, Pfeifer N, Addo MM, Diskin R, Becker S, Klein F
Nat Med (2019) 25 pp. 1589-1600 [ DOI: doi:10.1038/s41591-019-0602-4 Pubmed: 31591605 ]
- Envelope glycoprotein (18 kDa, Protein from Ebola virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Ebov-gp (Complex from Ebola virus)
- Neutralizing 3t0331 antibody (Complex from Homo sapiens)
- Heavy chain (23 kDa, Protein from Homo sapiens)
- Envelope glycoprotein,virion spike glycoprotein,ebov-gp1 (34 kDa, Protein from Ebola virus)
- Ebov-gp in complex with neutralizing 3t0331 antibody (Complex)
- Light chain (23 kDa, Protein from Homo sapiens)
- Alpha-d-mannopyranose (180 Da, Ligand)
EM structure of a EBOV-GP bound to 4M0368 neutralizing antibody
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6qd8
Q-score: 0.385
Diskin R, Cohen-Dvashi H, Ehrhardt S, Zehner M, Krahling V, Kreer C, Dahlke C, Ercanoglu MS, Gruell H, Addo MM, Becker S, Klein F
Nat Med (2019) [ ]
- Envelope glycoprotein (18 kDa, Protein from Ebola virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Heavy chain (23 kDa, Protein from Homo sapiens)
- Ebov-gp (Complex from Ebola virus)
- Light chain (23 kDa, Protein from Homo sapiens)
- Neutralizing 3t0331 antibody (Complex from Homo sapiens)
- Envelope glycoprotein,virion spike glycoprotein,ebov-gp1 (34 kDa, Protein from Ebola virus)
- Ebov-gp in complex with neutralizing 3t0331 antibody (Complex)