Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 8deu
Q-score: 0.578
Lyu M, Ayala JC, Chirakos I, Su CC, Shafer WM, Yu EW
Microbiol Spectr (2022) 10 pp. e0299022-e0299022 [ DOI: doi:10.1128/spectrum.02990-22 Pubmed: 36121287 ]
- Efflux pump membrane transporter (113 kDa, Protein from Neisseria gonorrhoeae)
- Multidrug efflux pump mtrd with casp peptide complex (Complex from Neisseria gonorrhoeae)
- Phosphatidylethanolamine (734 Da, Ligand)
- Casp peptide (967 Da, Protein from Neisseria gonorrhoeae)
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 8dev
Q-score: 0.551
Lyu M, Ayala JC, Chirakos I, Su CC, Shafer WM, Yu EW
Microbiol Spectr (2022) 10 pp. e0299022-e0299022 [ DOI: doi:10.1128/spectrum.02990-22 Pubmed: 36121287 ]
- Phosphatidylethanolamine (734 Da, Ligand)
- Multidrug efflux pump mtrd with colistin complex (Complex from Neisseria gonorrhoeae)
- Colistin (1 kDa, Protein from synthethic construct)
- Efflux pump membrane transporter (111 kDa, Protein from Neisseria gonorrhoeae)
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 8dew
Q-score: 0.582
Lyu M, Ayala JC, Chirakos I, Su CC, Shafer WM, Yu EW
Microbiol Spectr (2022) 10 pp. e0299022-e0299022 [ DOI: doi:10.1128/spectrum.02990-22 Pubmed: 36121287 ]
- Multidrug efflux pump mtrd with ll37 (17-32) peptide complex (Complex from Neisseria gonorrhoeae)
- Antibacterial peptide ll-37 (2 kDa, Protein from Homo sapiens)
- Phosphatidylethanolamine (734 Da, Ligand)
- Efflux pump membrane transporter (113 kDa, Protein from Neisseria gonorrhoeae)
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-I
Resolution: 3.64 Å
EM Method: Single-particle
Fitted PDBs: 7kgd
Q-score: 0.441
Morgan CE, Glaza P, Leus IV, Trinh A, Su CC, Cui M, Zgurskaya HI, Yu EW
Mbio (2021) 12 [ Pubmed: 33622726 DOI: doi:10.1128/mBio.03690-20 ]
- Adeb (Complex from Acinetobacter baumannii)
- Efflux pump membrane transporter (112 kDa, Protein from Acinetobacter baumannii)
- Phosphatidylethanolamine (734 Da, Ligand)
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-II
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 7kge
Q-score: 0.524
Morgan CE, Glaza P, Leus IV, Trinh A, Su CC, Cui M, Zgurskaya HI, Yu EW
Mbio (2021) 12 [ Pubmed: 33622726 DOI: doi:10.1128/mBio.03690-20 ]
- Adeb (Complex from Acinetobacter baumannii)
- Efflux pump membrane transporter (112 kDa, Protein from Acinetobacter baumannii)
- Phosphatidylethanolamine (734 Da, Ligand)
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-III
Resolution: 3.42 Å
EM Method: Single-particle
Fitted PDBs: 7kgf
Q-score: 0.461
Morgan CE, Glaza P, Leus IV, Trinh A, Su CC, Cui M, Zgurskaya HI, Yu EW
Mbio (2021) 12 [ Pubmed: 33622726 DOI: doi:10.1128/mBio.03690-20 ]
- Adeb (Complex from Acinetobacter baumannii)
- Efflux pump membrane transporter (112 kDa, Protein from Acinetobacter baumannii)
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-I
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 7kgg
Q-score: 0.58
Morgan CE, Glaza P, Leus IV, Trinh A, Su CC, Cui M, Zgurskaya HI, Yu EW
Mbio (2021) 12 [ Pubmed: 33622726 DOI: doi:10.1128/mBio.03690-20 ]
- Adeb (Complex from Acinetobacter baumannii)
- Efflux pump membrane transporter (112 kDa, Protein from Acinetobacter baumannii)
- Phosphatidylethanolamine (734 Da, Ligand)
- Ethidium (314 Da, Ligand)
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-II
Resolution: 3.79 Å
EM Method: Single-particle
Fitted PDBs: 7kgh
Q-score: 0.416
Morgan CE, Glaza P, Leus IV, Trinh A, Su CC, Cui M, Zgurskaya HI, Yu EW
Mbio (2021) 12 [ Pubmed: 33622726 DOI: doi:10.1128/mBio.03690-20 ]
- Adeb (Complex from Acinetobacter baumannii)
- Efflux pump membrane transporter (112 kDa, Protein from Acinetobacter baumannii)
- Phosphatidylethanolamine (734 Da, Ligand)
- Ethidium (314 Da, Ligand)
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-III
Resolution: 3.34 Å
EM Method: Single-particle
Fitted PDBs: 7kgi
Q-score: 0.496
Morgan CE, Glaza P, Leus IV, Trinh A, Su CC, Cui M, Zgurskaya HI, Yu EW
Mbio (2021) 12 [ Pubmed: 33622726 DOI: doi:10.1128/mBio.03690-20 ]
- Adeb (Complex from Acinetobacter baumannii)
- Efflux pump membrane transporter (112 kDa, Protein from Acinetobacter baumannii)
- Phosphatidylethanolamine (734 Da, Ligand)
- Ethidium (314 Da, Ligand)
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 6vks
Q-score: 0.48
Lyu M, Moseng MA, Reimche JL, Holley CL, Dhulipala V, Su CC, Shafer WM, Yu EW
Mbio (2020) 11 [ DOI: doi:10.1128/mBio.00996-20 Pubmed: 32457251 ]
- Mtrd efflux pump (300 kDa, Complex from Neisseria gonorrhoeae)
- Efflux pump membrane transporter (112 kDa, Protein from Neisseria gonorrhoeae)
- Phosphatidylethanolamine (734 Da, Ligand)
- (2r,4s)-2-[(1r)-1-{[(2r)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid (351 Da, Ligand)