Trimer of aminoglycoside efflux pump AcrD
Resolution: 3.09 Å
EM Method: Single-particle
Fitted PDBs: 8f3e
Q-score: 0.408
Zhang Z, Morgan CE, Cui M, Yu EW
Mbio (2023) 14 pp. e0338322-e0338322 [ DOI: doi:10.1128/mbio.03383-22 Pubmed: 36625574 ]
- Efflux pump membrane transporter (113 kDa, Protein from Escherichia coli)
- Acrd (Complex from Escherichia coli)
Dimer of aminoglycoside efflux pump AcrD
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 8f4n
Q-score: 0.543
Zhang Z, Morgan CE, Cui M, Yu EW
Mbio (2023) 14 pp. e0338322-e0338322 [ DOI: doi:10.1128/mbio.03383-22 Pubmed: 36625574 ]
- Efflux pump membrane transporter (113 kDa, Protein from Escherichia coli)
- Acrd (Complex from Escherichia coli)
Gentamicin bound aminoglycoside efflux pump AcrD
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 8f4r
Q-score: 0.535
Zhang Z, Morgan CE, Cui M, Yu EW
Mbio (2023) 14 pp. e0338322-e0338322 [ DOI: doi:10.1128/mbio.03383-22 Pubmed: 36625574 ]
- Efflux pump membrane transporter (113 kDa, Protein from Escherichia coli)
- (2r,3r,4r,5r)-2-((1s,2s,3r,4s,6r)-4,6-diamino-3-((2r,3r,6s)-3-amino-6-(aminomethyl)-tetrahydro-2h-pyran-2-yloxy)-2-hydr oxycyclohexyloxy)-5-methyl-4-(methylamino)-tetrahydro-2h-pyran-3,5-diol (449 Da, Ligand)
- Acrd (Complex from Escherichia coli)
Dimer of aminoglycoside efflux pump AcrD treated with gentamicin
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 8f56
Q-score: 0.507
Zhang Z, Morgan CE, Cui M, Yu EW
Mbio (2023) 14 pp. e0338322-e0338322 [ DOI: doi:10.1128/mbio.03383-22 Pubmed: 36625574 ]
- Efflux pump membrane transporter (113 kDa, Protein from Escherichia coli)
- Acrd (Complex from Escherichia coli)
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-I
Resolution: 3.64 Å
EM Method: Single-particle
Fitted PDBs: 7kgd
Q-score: 0.441
Morgan CE, Glaza P, Leus IV, Trinh A, Su CC, Cui M, Zgurskaya HI, Yu EW
Mbio (2021) 12 [ Pubmed: 33622726 DOI: doi:10.1128/mBio.03690-20 ]
- Adeb (Complex from Acinetobacter baumannii)
- Efflux pump membrane transporter (112 kDa, Protein from Acinetobacter baumannii)
- Phosphatidylethanolamine (734 Da, Ligand)
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-II
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 7kge
Q-score: 0.524
Morgan CE, Glaza P, Leus IV, Trinh A, Su CC, Cui M, Zgurskaya HI, Yu EW
Mbio (2021) 12 [ Pubmed: 33622726 DOI: doi:10.1128/mBio.03690-20 ]
- Adeb (Complex from Acinetobacter baumannii)
- Efflux pump membrane transporter (112 kDa, Protein from Acinetobacter baumannii)
- Phosphatidylethanolamine (734 Da, Ligand)
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-III
Resolution: 3.42 Å
EM Method: Single-particle
Fitted PDBs: 7kgf
Q-score: 0.461
Morgan CE, Glaza P, Leus IV, Trinh A, Su CC, Cui M, Zgurskaya HI, Yu EW
Mbio (2021) 12 [ Pubmed: 33622726 DOI: doi:10.1128/mBio.03690-20 ]
- Adeb (Complex from Acinetobacter baumannii)
- Efflux pump membrane transporter (112 kDa, Protein from Acinetobacter baumannii)
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-I
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 7kgg
Q-score: 0.58
Morgan CE, Glaza P, Leus IV, Trinh A, Su CC, Cui M, Zgurskaya HI, Yu EW
Mbio (2021) 12 [ Pubmed: 33622726 DOI: doi:10.1128/mBio.03690-20 ]
- Adeb (Complex from Acinetobacter baumannii)
- Efflux pump membrane transporter (112 kDa, Protein from Acinetobacter baumannii)
- Phosphatidylethanolamine (734 Da, Ligand)
- Ethidium (314 Da, Ligand)
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-II
Resolution: 3.79 Å
EM Method: Single-particle
Fitted PDBs: 7kgh
Q-score: 0.416
Morgan CE, Glaza P, Leus IV, Trinh A, Su CC, Cui M, Zgurskaya HI, Yu EW
Mbio (2021) 12 [ Pubmed: 33622726 DOI: doi:10.1128/mBio.03690-20 ]
- Adeb (Complex from Acinetobacter baumannii)
- Efflux pump membrane transporter (112 kDa, Protein from Acinetobacter baumannii)
- Phosphatidylethanolamine (734 Da, Ligand)
- Ethidium (314 Da, Ligand)
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-III
Resolution: 3.34 Å
EM Method: Single-particle
Fitted PDBs: 7kgi
Q-score: 0.496
Morgan CE, Glaza P, Leus IV, Trinh A, Su CC, Cui M, Zgurskaya HI, Yu EW
Mbio (2021) 12 [ Pubmed: 33622726 DOI: doi:10.1128/mBio.03690-20 ]
- Adeb (Complex from Acinetobacter baumannii)
- Efflux pump membrane transporter (112 kDa, Protein from Acinetobacter baumannii)
- Phosphatidylethanolamine (734 Da, Ligand)
- Ethidium (314 Da, Ligand)