Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8e2x
Q-score: 0.54
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Vp2 (27 kDa, Protein from Human enterovirus 71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp3 (26 kDa, Protein from Human enterovirus 71)
- Vp4 (7 kDa, Protein from Human enterovirus 71)
- Vp1 (32 kDa, Protein from Human enterovirus 71)
- Sphingosine (299 Da, Ligand)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 8.0 Å
EM Method: Single-particle
Fitted PDBs: 8e2y
Q-score: 0.148
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Vp2 (25 kDa, Protein from Enterovirus A71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp1 (25 kDa, Protein from Enterovirus A71)
- Genome polyprotein (25 kDa, Protein from Enterovirus A71)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 14.0 Å
EM Method: Single-particle
Fitted PDBs: 8e31
Q-score: 0.084
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Genome polyprotein (24 kDa, Protein from Enterovirus A71)
- Vp3 (23 kDa, Protein from Enterovirus A71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp1 (25 kDa, Protein from Enterovirus A71)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 8e38
Q-score: 0.363
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Vp2 (27 kDa, Protein from Human enterovirus 71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp3 (26 kDa, Protein from Human enterovirus 71)
- Vp1 (32 kDa, Protein from Human enterovirus 71)
- Vp4 (7 kDa, Protein from Human enterovirus 71)
- Sphingosine (299 Da, Ligand)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8e39
Q-score: 0.576
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Vp2 (27 kDa, Protein from Human enterovirus 71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp3 (26 kDa, Protein from Human enterovirus 71)
- Vp1 (32 kDa, Protein from Human enterovirus 71)
- Vp4 (7 kDa, Protein from Human enterovirus 71)
- Sphingosine (299 Da, Ligand)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 7.4 Å
EM Method: Single-particle
Fitted PDBs: 8e3a
Q-score: 0.225
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Vp2 (27 kDa, Protein from Human enterovirus 71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp3 (26 kDa, Protein from Human enterovirus 71)
- Vp1 (32 kDa, Protein from Human enterovirus 71)
- Vp4 (7 kDa, Protein from Human enterovirus 71)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 5.9 Å
EM Method: Single-particle
Fitted PDBs: 8e3b
Q-score: 0.336
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Vp1 (25 kDa, Protein from Enterovirus A71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp3 (25 kDa, Protein from Enterovirus A71)
- Vp2 (25 kDa, Protein from Enterovirus A71)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 7.1 Å
EM Method: Single-particle
Fitted PDBs: 8e3c
Q-score: 0.144
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Vp1 (25 kDa, Protein from Enterovirus A71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp3 (25 kDa, Protein from Enterovirus A71)
- Vp2 (25 kDa, Protein from Enterovirus A71)
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 8c6d
Q-score: 0.614
Kingston NJ, Snowden JS, Martyna A, Shegdar M, Grehan K, Tedcastle A, Pegg E, Fox H, Macadam AJ, Martin J, Hogle JM, Rowlands DJ, Stonehouse NJ
bioRxiv (2023) [ Pubmed: 36778240 DOI: doi:10.1101/2023.01.30.526315 ]
- (2s,3r,4e)-2-aminooctadec-4-ene-1,3-diol (299 Da, Ligand)
- Enterovirus a71 (Virus from Enterovirus A71)
- Genome polyprotein (32 kDa, Protein from Enterovirus A71)
- Genome polyprotein (26 kDa, Protein from Enterovirus A71)
- Genome polyprotein (fragment) (35 kDa, Protein from Enterovirus A71)
CryoEM structure of human enterovirus 70 in complex with Pleconaril
Resolution: 2.31 Å
EM Method: Single-particle
Fitted PDBs: 7ozk
Q-score: 0.654
Fuzik T, Moravcova J, Kalynych S, Plevka P
J Virol (2022) 96 pp. e0060422-e0060422 [ DOI: doi:10.1128/jvi.00604-22 Pubmed: 35939401 ]
- Water (18 Da, Ligand)
- Capsid protein vp1 (33 kDa, Protein from Human enterovirus 70 (strain J670/71))
- Capsid protein vp2 (27 kDa, Protein from Human enterovirus 70 (strain J670/71))
- Human enterovirus 70 (strain j670/71) (5 MDa, Virus from Human enterovirus 70 (strain J670/71))
- 3-{3,5-dimethyl-4-[3-(3-methyl-isoxazol-5-yl)-propoxy]-phenyl}-5-trifluoromethyl-[1,2,4]oxadiazole (381 Da, Ligand)
- Capsid protein vp4 (7 kDa, Protein from Human enterovirus 70 (strain J670/71))
- Capsid protein vp3 (26 kDa, Protein from Human enterovirus 70 (strain J670/71))