Fibriansah G, Ng TS, Lim XN, Tan AWK, Shi J, Crowe JE, Lok SM
To Be Published
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Dengue serotype 2 strain d2y98p-pp1 n153q mutant (Complex from dengue virus type 2)
- Envelope protein (54 kDa, Protein from dengue virus type 2)
- Dengue virus serotype 2 strain y98p-pp1 n153q mutant in complex with human antibody 2d22 fab at 37 deg c (Complex)
- Human antibody 2d22 fab (heavy and light chains) (Complex from Homo sapiens)
- Membrane polyprotein (8 kDa, Protein from dengue virus type 2)
- Human antibody 2d22 fab heavy chain (13 kDa, Protein from Homo sapiens)
- Human antibody 2d22 fab light chain (12 kDa, Protein from Homo sapiens)
Fibriansah G, Ng TS, Lim XN, Tan AWK, Shi J, Crowe JE, Lok SM
To Be Published
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Membrane protein (8 kDa, Protein from dengue virus type 2)
- Dengue serotype 2 strain d2y98p-pp1 n153q mutant (Complex from dengue virus type 2)
- Envelope protein (54 kDa, Protein from dengue virus type 2)
- Human antibody c10 fab (light chain) (11 kDa, Protein from Homo sapiens)
- Human antibody c10 fab (heavy chain) (14 kDa, Protein from Homo sapiens)
- Human antibody c10 fab (heavy and light chains) (Complex from Homo sapiens)
- Dengue virus serotype 2 strain y98p-pp1 n153q mutant in complex with human antibody c10 fab at 37 deg c (Complex)
Fibriansah G, Ng TS, Lim XN, Tan AWK, Shi J, Crowe JE, Lok SM
To Be Published
- Human antibody 2d22 fab (heavy chain) (13 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Dengue virus serotype 2 strain d2y98p-pp1 in complex with human antibody 2d22 fab at 37 deg c (Complex)
- Envelope protein (54 kDa, Protein from dengue virus type 2)
- Human antibody 2d22 fab (light chain) (12 kDa, Protein from Homo sapiens)
- Human antibody 2d22 fab (heavy and light chains) (Complex from Homo sapiens)
- Dengue serotype 2 strain d2y98p-pp1 (Complex from dengue virus type 2)
- Membrane polyprotein (8 kDa, Protein from dengue virus type 2)
Fibriansah G, Ng TS, Lim XN, Tan AWK, Shi J, Crowe JE, Lok SM
To Be Published
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Envelope protein (54 kDa, Protein from dengue virus type 2)
- Dengue virus type 2 (Virus)
- Human antibody c10 fab (light chain) (11 kDa, Protein from Homo sapiens)
- Dengue serotype 2 strain d2y98p-pp1 (Complex from dengue virus type 2)
- Human antibody c10 fab (heavy chain) (14 kDa, Protein from Homo sapiens)
- Membrane polyprotein (8 kDa, Protein from dengue virus type 2)
- Human antibody c10 fab (heavy and light chains) (Complex from Homo sapiens)
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 9c44
Q-score: 0.535
Liu P, Huang ML, Guo H, McCallum M, Si JY, Chen YM, Wang CL, Yu X, Shi LL, Xiong Q, Ma CB, Bowen JE, Tong F, Liu C, Sun YH, Yang X, Chen J, Guo M, Li J, Corti D, Veesler D, Shi ZL, Yan H
Nature (2024) 635 pp. 978-986 [ Pubmed: 39478224 DOI: doi:10.1038/s41586-024-08121-5 ]
- Sars-cov-2 s bound by s2l20 fab (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- S2l20 fab light chain variable region (11 kDa, Protein from Homo sapiens)
- S2l20 fab heavy chain variable (13 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 S + S2L20 (local refinement of NTD and S2L20 Fab variable region)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9c45
Q-score: 0.552
Liu P, Huang ML, Guo H, McCallum M, Si JY, Chen YM, Wang CL, Yu X, Shi LL, Xiong Q, Ma CB, Bowen JE, Tong F, Liu C, Sun YH, Yang X, Chen J, Guo M, Li J, Corti D, Veesler D, Shi ZL, Yan H
Nature (2024) 635 pp. 978-986 [ Pubmed: 39478224 DOI: doi:10.1038/s41586-024-08121-5 ]
- Sars-cov-2 s bound by s2l20 fab (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- S2l20 fab light chain variable region (11 kDa, Protein from Homo sapiens)
- S2l20 fab heavy chain variable (13 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Composite cryoEM map of CD20 in complex with wild type Rituximab Fab
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8vgn
Q-score: 0.549
Kung JE, Johnson MC, Jao CC, Arthur CP, Tegunov D, Rohou A, Sudhamsu J
bioRxiv (2024) [ DOI: doi:10.1101/2024.05.10.593593 Pubmed: 38798381 ]
- Rituximab fab heavy chain (24 kDa, Protein from Homo sapiens)
- Cd20 (Complex from Homo sapiens)
- Cd20 in complex with rituximab fab (Complex)
- Rituximab fab (Complex from Homo sapiens)
- B-lymphocyte antigen cd20 (31 kDa, Protein from Homo sapiens)
- Rituximab fab light chain (23 kDa, Protein from Homo sapiens)
Consensus cryoEM map of CD20 in complex with wild type Rituximab Fab
Kung JE, Johnson MC, Jao CC, Arthur CP, Tegunov D, Rohou A, Sudhamsu J
bioRxiv (2024) [ DOI: doi:10.1101/2024.05.10.593593 Pubmed: 38798381 ]
- Cd20 (Protein from Homo sapiens)
- Rituximab fab light chain (Protein from Homo sapiens)
- Cd20 (Complex from Homo sapiens)
- Cd20 in complex with rituximab fab (Complex)
- Rituximab fab (Complex from Homo sapiens)
- Rituximab fab heavy chain (Protein from Homo sapiens)
Kung JE, Johnson MC, Jao CC, Arthur CP, Tegunov D, Rohou A, Sudhamsu J
bioRxiv (2024) [ DOI: doi:10.1101/2024.05.10.593593 Pubmed: 38798381 ]
- Cd20 (Protein from Homo sapiens)
- Rituximab fab light chain (Protein from Homo sapiens)
- Cd20 (Complex from Homo sapiens)
- Cd20 in complex with rituximab fab (Complex)
- Rituximab fab (Complex from Homo sapiens)
- Rituximab fab heavy chain (Protein from Homo sapiens)
Constituent map: Focused refinement of CD20 in complex of CD20 with Rituximab Fab
Kung JE, Johnson MC, Jao CC, Arthur CP, Tegunov D, Rohou A, Sudhamsu J
bioRxiv (2024) [ DOI: doi:10.1101/2024.05.10.593593 Pubmed: 38798381 ]
- Cd20 (Protein from Homo sapiens)
- Rituximab fab light chain (Protein from Homo sapiens)
- Cd20 (Complex from Homo sapiens)
- Rituximab heavy chain (Protein from Homo sapiens)
- Cd20 in complex with rituximab fab (Complex)
- Rituximab fab (Complex from Homo sapiens)