CCHFV GP38 bound with ADI-46143 and ADI-46158 Fabs
Shin OS, Monticelli SR, Hjorth CK, Hornet V, Doyle M, Abelson D, Kuehne AI, Wang A, Bakken RR, Mishra AK, Middlecamp M, Champney E, Stuart L, Maurer DP, Li J, Berrigan J, Barajas J, Balinandi S, Lutwama JJ, Lobel L, Zeitlin L, Walker LM, Dye JM, Chandran K, Herbert AS, Pauli NT, McLellan JS
Cell Rep (2024) 43 pp. 114502-114502 [ DOI: doi:10.1016/j.celrep.2024.114502 Pubmed: 39002130 ]
- Cchfv gp38 (Protein from Crimean-Congo hemorrhagic fever virus)
- Cchfv gp38 (Complex from Crimean-Congo hemorrhagic fever virus)
- Adi-46158 fab light chain (Protein from Homo sapiens)
- Adi-46158 fab heavy chain (Protein from Homo sapiens)
- Adi-46143 fab (Complex from Homo sapiens)
- Adi-46143 fab heavy chain (Protein from Homo sapiens)
- Adi-46143 fab light chain (Protein from Homo sapiens)
- Cchfv gp38 bound with adi-46143 fab and adi-46158 fab (Complex)
- Adi-46158 fab (Complex from Homo sapiens)
CCHFV GP38 bound with ADI-58062 and ADI-63530 Fabs
Shin OS, Monticelli SR, Hjorth CK, Hornet V, Doyle M, Abelson D, Kuehne AI, Wang A, Bakken RR, Mishra AK, Middlecamp M, Champney E, Stuart L, Maurer DP, Li J, Berrigan J, Barajas J, Balinandi S, Lutwama JJ, Lobel L, Zeitlin L, Walker LM, Dye JM, Chandran K, Herbert AS, Pauli NT, McLellan JS
Cell Rep (2024) 43 pp. 114502-114502 [ DOI: doi:10.1016/j.celrep.2024.114502 Pubmed: 39002130 ]
- Adi-58062 fab (Complex from Homo sapiens)
- Cchfv gp38 (Protein from Crimean-Congo hemorrhagic fever virus)
- Cchfv gp38 (Complex from Crimean-Congo hemorrhagic fever virus)
- Adi-63530 fab heavy chain (Protein from Homo sapiens)
- Adi-63530 fab (Complex from Homo sapiens)
- Adi-63530 fab light chain (Protein from Homo sapiens)
- Cchfv gp38 bound with adi-58062 fab and adi-63530 fab (Complex)
- Adi-58062 fab light chain (Protein from Homo sapiens)
- Adi-58062 fab heavy chain (Protein from Homo sapiens)
CCHFV GP38 bound with ADI-58026 and ADI-63547 Fabs
Shin OS, Monticelli SR, Hjorth CK, Hornet V, Doyle M, Abelson D, Kuehne AI, Wang A, Bakken RR, Mishra AK, Middlecamp M, Champney E, Stuart L, Maurer DP, Li J, Berrigan J, Barajas J, Balinandi S, Lutwama JJ, Lobel L, Zeitlin L, Walker LM, Dye JM, Chandran K, Herbert AS, Pauli NT, McLellan JS
Cell Rep (2024) 43 pp. 114502-114502 [ DOI: doi:10.1016/j.celrep.2024.114502 Pubmed: 39002130 ]
- Cchfv gp38 bound with adi-58026 fab and adi-63547 fab (Complex)
- Adi-58026 fab (Complex from Homo sapiens)
- Cchfv gp38 (Protein from Crimean-Congo hemorrhagic fever virus)
- Cchfv gp38 (Complex from Crimean-Congo hemorrhagic fever virus)
- Adi-63547 fab (Complex from Homo sapiens)
- Adi-58026 fab heavy chain (Protein from Homo sapiens)
- Adi-63547 fab heavy chain (Protein from Homo sapiens)
- Adi-58026 fab light chain (Protein from Homo sapiens)
- Adi-63547 fab light chain (Protein from Homo sapiens)
CCHFV GP38 bound to ADI-46152 and ADI-58048 Fabs
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8vww
Q-score: 0.412
Shin OS, Monticelli SR, Hjorth CK, Hornet V, Doyle M, Abelson D, Kuehne AI, Wang A, Bakken RR, Mishra AK, Middlecamp M, Champney E, Stuart L, Maurer DP, Li J, Berrigan J, Barajas J, Balinandi S, Lutwama JJ, Lobel L, Zeitlin L, Walker LM, Dye JM, Chandran K, Herbert AS, Pauli NT, McLellan JS
Cell Rep (2024) 43 pp. 114502-114502 [ DOI: doi:10.1016/j.celrep.2024.114502 Pubmed: 39002130 ]
- Gp38 (30 kDa, Protein from Crimean-Congo hemorrhagic fever virus strain IbAr10200)
- Adi-58048 fab (Complex from Homo sapiens)
- Cchfv gp38 (Complex from Crimean-Congo hemorrhagic fever virus)
- Adi-58048 fab heavy chain (23 kDa, Protein from Homo sapiens)
- Cchfv gp38 bound with adi-46152 and adi-58048 fabs (Complex)
- Adi-46152 fab heavy chain (24 kDa, Protein from Homo sapiens)
- Adi-58048 fab light chain (23 kDa, Protein from Homo sapiens)
- Adi-46152 fab (Complex from Homo sapiens)
- Adi-46152 fab light chain (22 kDa, Protein from Homo sapiens)
Structure of lineage I (Pinneo) Lassa virus glycoprotein bound to Fab 25.10C
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7uds
Q-score: 0.403
Buck TK, Enriquez AS, Schendel SL, Zandonatti MA, Harkins SS, Li H, Moon-Walker A, Robinson JE, Branco LM, Garry RF, Saphire EO, Hastie KM
Mbio (2022) 13 pp. e0127822-e0127822 [ Pubmed: 35730904 DOI: doi:10.1128/mbio.01278-22 ]
- 25.10c fab heavy chain (24 kDa, Protein from Homo sapiens)
- Glycoprotein g1 (28 kDa, Protein from Lassa mammarenavirus)
- Lineage i lassa virus glycoprotein bound to fab 25.10c (350 kDa, Complex)
- Glycoprotein g2 (23 kDa, Protein from Lassa mammarenavirus)
- 25.10c fab light chain (22 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Lineage I (Pinneo) Lassa virus glycoprotein bound to 18.5C-M30 Fab
Resolution: 3.59 Å
EM Method: Single-particle
Fitted PDBs: 7ul7
Q-score: 0.336
Buck TK, Enriquez AS, Schendel SL, Zandonatti MA, Harkins SS, Li H, Moon-Walker A, Robinson JE, Branco LM, Garry RF, Saphire EO, Hastie KM
Mbio (2022) 13 pp. e0127822-e0127822 [ Pubmed: 35730904 DOI: doi:10.1128/mbio.01278-22 ]
- Glycoprotein g1 (28 kDa, Protein from Lassa mammarenavirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Glycoprotein g2 (23 kDa, Protein from Lassa mammarenavirus)
- Lineage i (pinneo) lassa virus glycoprotein bound to 18.5c-m30 fab (350 kDa, Complex)
- 18.5c-m30 fab heavy chain (26 kDa, Protein from Homo sapiens)
- 18.5c-m30 fab light chain (25 kDa, Protein from Homo sapiens)
Structure of Lassa Virus glycoprotein (Josiah) bound to Fab 25.10C
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7tyv
Q-score: 0.447
Enriquez AS, Buck TK, Li H, Norris MJ, Moon-Walker A, Zandonatti MA, Harkins SS, Robinson JE, Branco LM, Garry RF, Saphire EO, Hastie KM
Cell Rep (2022) 39 pp. 110841-110841 [ Pubmed: 35613585 DOI: doi:10.1016/j.celrep.2022.110841 ]
- 25.10c fab heavy chain (24 kDa, Protein from Homo sapiens)
- Lassa virus glycoprotein josiah (Complex from Lassa virus)
- Glycoprotein g2 (19 kDa, Protein from Lassa virus)
- 25.10c fab fragment (Complex from Homo sapiens)
- Glycoprotein g1 (29 kDa, Protein from Lassa virus)
- 25.10c fab light chain (25 kDa, Protein from Homo sapiens)
- Lassa virus josiah gp complexed with anti-lassa virus antibody fab fragment 25.10c (350 kDa, Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
SARS-CoV-2 S-RBD + Fab 54042-4
Resolution: 2.69 Å
EM Method: Single-particle
Fitted PDBs: 7t01
Q-score: 0.463
Kramer KJ, Johnson NV, Shiakolas AR, Suryadevara N, Periasamy S, Raju N, Williams JK, Wrapp D, Zost SJ, Walker LM, Wall SC, Holt CM, Hsieh CL, Sutton RE, Paulo A, Nargi RS, Davidson E, Doranz BJ, Crowe Jr JE, Bukreyev A, Carnahan RH, McLellan JS, Georgiev IS
Cell Rep (2021) 37 pp. 109784-109784 [ DOI: doi:10.1016/j.celrep.2021.109784 Pubmed: 34592170 ]
- 54042-4 fab - heavy chain (13 kDa, Protein from Homo sapiens)
- Spike protein s1 (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 54042-4 fab - light chain (11 kDa, Protein from Homo sapiens)
- Complex of sars-cov-2 s-ecd with 54042-4 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
HIV-1 Env (BG505 SOSIP.664) in complex with the IgA bNAb 7-269 and the antibody 3BNC117.
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7pc2
Q-score: -0.058
Lorin V, Fernandez I, Masse-Ranson G, Bouvin-Pley M, Molinos-Albert LM, Planchais C, Hieu T, Pehau-Arnaudet G, Hrebik D, Girelli-Zubani G, Fiquet O, Guivel-Benhassine F, Sanders RW, Walker BD, Schwartz O, Scheid JF, Dimitrov JD, Plevka P, Braibant M, Seaman MS, Bontems F, Di Santo JP, Rey FA, Mouquet H
J Exp Med (2022) 219 [ Pubmed: 35230385 DOI: doi:10.1084/jem.20212045 ]
- 7-269 iga fab heavy chain (26 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Gp41 bg505 t332n sosip.664 (17 kDa, Protein from Human immunodeficiency virus)
- 3bnc117 igg fab light chain (23 kDa, Protein from Homo sapiens)
- 7-269 iga fab light chain (23 kDa, Protein from Homo sapiens)
- Env protomer with one 3bnc117 fab and one 7-269 fab (Complex from Homo sapiens)
- Gp120, bg505 sosip.664 t332n (54 kDa, Protein from Human immunodeficiency virus)
- 3bnc igg fab heavy chain (24 kDa, Protein from Homo sapiens)
- Ternary complex of hiv env (bg505 sosip.664) with bnabs 3bnc117 (igg fab) and 7269 (iga fab) (Complex from Homo sapiens)
CryoEM structure of Eastern Equine Encephalitis (EEEV) VLP with Fab EEEV-143.
Resolution: 8.5 Å
EM Method: Single-particle
Fitted PDBs: 6xob
Q-score: 0.182
Williamson LE, Gilliland Jr T, Yadav PK, Binshtein E, Bombardi R, Kose N, Nargi RS, Sutton RE, Durie CL, Armstrong E, Carnahan RH, Walker LM, Kim AS, Fox JM, Diamond MS, Ohi MD, Klimstra WB, Crowe Jr JE
Cell (2020) 183 pp. 1884-1900.e23 [ Pubmed: 33301709 DOI: doi:10.1016/j.cell.2020.11.011 ]
- Togavirin (47 kDa, Protein from Eastern equine encephalitis virus)
- Eeev-143 fab heavy chain (23 kDa, Protein from Homo sapiens)
- Togavirin (29 kDa, Protein from Eastern equine encephalitis virus)
- Togavirin (47 kDa, Protein from Eastern equine encephalitis virus)
- Eastern equine encephalitis virus (Virus from Eastern equine encephalitis virus)
- Eeev-143 fab light chain (23 kDa, Protein from Homo sapiens)