Cryo-EM structure of Chikungunya virus in complex with Fab fragments of mAb CHK-124
Resolution: 5.2 Å
EM Method: Single-particle
Fitted PDBs: 7cvy
Q-score: 0.178
Zhou QF, Fox JM, Earnest JT, Ng TS, Kim AS, Fibriansah G, Kostyuchenko VA, Shi J, Shu B, Diamond MS, Lok SM
PNAS (2020) 117 pp. 27637-27645 [ DOI: doi:10.1073/pnas.2008051117 Pubmed: 33087569 ]
- Fab light chain (23 kDa, Protein from Mus musculus)
- Chikungunya virus in complex with fab fragments of mab chk-124 (Complex)
- E2 glycoprotein (46 kDa, Protein from Chikungunya virus)
- Fab heavy chain (23 kDa, Protein from Mus musculus)
- E1 glycoprotein (47 kDa, Protein from Chikungunya virus)
- Capsid protein (16 kDa, Protein from Chikungunya virus)
- Chikungunya virus (Cellular component from Chikungunya virus)
- Fab region of chk-124 (Cellular component from Mus musculus)
Cryo-EM structure of Chikungunya virus in complex with mAb CHK-263 IgG
Resolution: 5.9 Å
EM Method: Single-particle
Fitted PDBs: 7cw0
Q-score: 0.184
Zhou QF, Fox JM, Earnest JT, Ng TS, Kim AS, Fibriansah G, Kostyuchenko VA, Shi J, Shu B, Diamond MS, Lok SM
PNAS (2020) 117 pp. 27637-27645 [ DOI: doi:10.1073/pnas.2008051117 Pubmed: 33087569 ]
- E1 glycoprotein (47 kDa, Protein from Chikungunya virus)
- E2 glycoprotein (46 kDa, Protein from Chikungunya virus)
- Fab light chain (23 kDa, Protein from Mus musculus)
- Capsid protein (16 kDa, Protein from Chikungunya virus)
- Chikungunya virus (Cellular component from Chikungunya virus)
- Fab heavy chain (22 kDa, Protein from Mus musculus)
- Fab region of chk-263 (Cellular component from Mus musculus)
- Chikungunya virus in complex with mab chk-263 igg (Complex)
Resolution: 5.0 Å
EM Method: Single-particle
Fitted PDBs: 6vpx
Q-score: 0.2
Rantalainen K, Berndsen ZT, Antanasijevic A, Schiffner T, Zhang X, Lee WH, Torres JL, Zhang L, Irimia A, Copps J, Zhou KH, Kwon YD, Law WH, Schramm CA, Verardi R, Krebs SJ, Kwong PD, Doria-Rose NA, Wilson IA, Zwick MB, Yates 3rd JR, Schief WR, Ward AB
Cell Rep (2020) 31 pp. 107583-107583 [ DOI: doi:10.1016/j.celrep.2020.107583 Pubmed: 32348769 ]
- Mper peptide (Complex from Homo sapiens)
- 10e8 fab (Complex from Homo sapiens)
- Envelope glycoprotein gp41 (17 kDa, Protein from Human immunodeficiency virus 1)
- Nanodisc of full-length hiv-1 envelope glycoprotein clone amc011 in complex with one pgt151 fab and three 10e8 fabs (Complex)
- (2r)-3-(phosphonooxy)propane-1,2-diyl dihexanoate (368 Da, Ligand)
- Envelope glycoprotein gp120 (51 kDa, Protein from Human immunodeficiency virus 1)
- Antibody 10e8 fab heavy chain (14 kDa, Protein from Homo sapiens)
- Antibody 10e8 fab light chain (11 kDa, Protein from Homo sapiens)
- Antibody pgt151 fab light chain (11 kDa, Protein from Homo sapiens)
- Antibody pgt151 fab heavy chain (15 kDa, Protein from Homo sapiens)
- Amc011 (Complex from Human immunodeficiency virus 1)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Pgt151 fab (Complex from Homo sapiens)
- Mper peptide (2 kDa, Protein from Homo sapiens)