Gag CA-SP1 immature lattice bound with Lenacapavir from enveloped virus like particles
Resolution: 2.18 Å
EM Method: Single-particle
Fitted PDBs: 9d6d
Q-score: 0.587
Wu C, Meuser ME, Rey JS, Meshkin H, Yang R, Devarkar SC, Freniere C, Shi J, Aiken C, Perilla JR, Xiong Y
bioRxiv (2024) [ DOI: doi:10.1101/2024.10.09.617473 Pubmed: 39416065 ]
- Water (18 Da, Ligand)
- Lenacapavir (968 Da, Ligand)
- Inositol hexakisphosphate (660 Da, Ligand)
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE))
- Human immunodeficiency virus type 1 (new york-5 isolate) (Virus from Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE))
Gag CA-SP1 immature lattice bound with Bevirimat from enveloped virus like particles
Resolution: 3.09 Å
EM Method: Single-particle
Fitted PDBs: 9d6e
Q-score: 0.467
Wu C, Meuser ME, Rey JS, Meshkin H, Yang R, Devarkar SC, Freniere C, Shi J, Aiken C, Perilla JR, Xiong Y
bioRxiv (2024) [ DOI: doi:10.1101/2024.10.09.617473 Pubmed: 39416065 ]
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE))
- Inositol hexakisphosphate (660 Da, Ligand)
- Human immunodeficiency virus type 1 (new york-5 isolate) (Virus from Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE))
- 3alpha-[(3-carboxy-3-methylbutanoyl)oxy]-8alpha,9beta,10alpha,13alpha,17alpha,19beta-lup-20(29)-en-28-oic acid (584 Da, Ligand)
Gag CA-SP1 immature lattice from enveloped and perforated virus like particles
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 9d88
Q-score: 0.474
Wu C, Meuser ME, Rey JS, Meshkin H, Yang R, Devarkar SC, Freniere C, Shi J, Aiken C, Perilla JR, Xiong Y
bioRxiv (2024) [ DOI: doi:10.1101/2024.10.09.617473 Pubmed: 39416065 ]
In situ cryoEM structure of the Prototype Foamy Virus capsid, pentamer localised reconstruction
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8ozl
Q-score: 0.564
Calcraft T, Stanke-Scheffler N, Nans A, Lindemann D, Taylor IA, Rosenthal PB
Cell (2024) 187 pp. 4213-4230.e19 [ Pubmed: 39013471 DOI: doi:10.1016/j.cell.2024.06.017 ]
In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 1 localised reconstruction
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8ozm
Q-score: 0.565
Calcraft T, Stanke-Scheffler N, Nans A, Lindemann D, Taylor IA, Rosenthal PB
Cell (2024) 187 pp. 4213-4230.e19 [ DOI: doi:10.1016/j.cell.2024.06.017 Pubmed: 39013471 ]
In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 2 localised reconstruction
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8ozn
Q-score: 0.545
Calcraft T, Stanke-Scheffler N, Nans A, Lindemann D, Taylor IA, Rosenthal PB
Cell (2024) 187 pp. 4213-4230.e19 [ Pubmed: 39013471 DOI: doi:10.1016/j.cell.2024.06.017 ]
HIV-1 mature capsid pentamer from CA-IP6 CLPs
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 8ckw
Q-score: 0.515
Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG
PNAS (2023) 120 pp. e2220557120-e2220557120 [ DOI: doi:10.1073/pnas.2220557120 Pubmed: 37040417 ]
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 mature capsid (26 kDa, Complex from Human immunodeficiency virus 1)
HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to Nup153 peptide
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 8ckz
Q-score: 0.522
Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG
PNAS (2023) 120 pp. e2220557120-e2220557120 [ DOI: doi:10.1073/pnas.2220557120 Pubmed: 37040417 ]
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 mature capsid (27 kDa, Complex from Human immunodeficiency virus 1)
HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to CPSF6 peptide
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 8cl2
Q-score: 0.474
Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG
PNAS (2023) 120 pp. e2220557120-e2220557120 [ DOI: doi:10.1073/pnas.2220557120 Pubmed: 37040417 ]
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 mature capsid (27 kDa, Complex from Human immunodeficiency virus 1)
HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to Sec24C peptide
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 8cl4
Q-score: 0.474
Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG
PNAS (2023) 120 pp. e2220557120-e2220557120 [ DOI: doi:10.1073/pnas.2220557120 Pubmed: 37040417 ]
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 mature capsid (27 kDa, Complex from Human immunodeficiency virus 1)