Atomic structure of wheat ribosome reveals unique features of the plant ribosomes
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 8jiv
Q-score: 0.649
Mishra RK, Sharma P, Khaja FT, Uday AB, Hussain T
Structure (2024) 32 pp. 562- [ DOI: doi:10.1016/j.str.2024.02.006 Pubmed: 38458197 ]
- 60s ribosomal protein ul30 (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l4 c-terminal domain-containing protein (44 kDa, Protein from Triticum aestivum)
- Trash domain-containing protein (18 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l36 (12 kDa, Protein from Triticum aestivum)
- Ribosomal protein l6 alpha-beta domain-containing protein (21 kDa, Protein from Triticum aestivum)
- Ribosomal protein l5 eukaryotic c-terminal domain-containing protein (35 kDa, Protein from Triticum aestivum)
- Genome assembly, chromosome: ii (16 kDa, Protein from Triticum aestivum)
- Ribosomal protein l10e/l16 domain-containing protein (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l29 (6 kDa, Protein from Triticum aestivum)
- Ribosomal protein l18e/l15p domain-containing protein (21 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l6 (25 kDa, Protein from Triticum aestivum)
- Ribosomal protein l3 (44 kDa, Protein from Triticum aestivum)
- Ribosomal protein l15 (24 kDa, Protein from Triticum aestivum)
- Ribosomal protein l13a (23 kDa, Protein from Triticum aestivum)
- Potassium ion (39 Da, Ligand)
- 60s ribosomal protein ul22 (19 kDa, Protein from Triticum aestivum)
- Kow domain-containing protein (14 kDa, Protein from Triticum aestivum)
- The large subunit of wheat ribosome (Complex from Triticum aestivum)
- Ribosomal protein l17 (14 kDa, Protein from Triticum aestivum)
- Ribosomal protein l37 (10 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l34 (13 kDa, Protein from Triticum aestivum)
- 5.8s rrna (50 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein l38 (8 kDa, Protein from Triticum aestivum)
- Ribosomal l28e/mak16 domain-containing protein (16 kDa, Protein from Triticum aestivum)
- Magnesium ion (24 Da, Ligand)
- Ribosomal protein l18e/l15p domain-containing protein (16 kDa, Protein from Triticum aestivum)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein l19 (24 kDa, Protein from Triticum aestivum)
- Genome assembly, chromosome: ii (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el33 (12 kDa, Protein from Triticum aestivum)
- Ribosomal protein l39 (6 kDa, Protein from Triticum aestivum)
- Ubiquitin-like domain-containing protein (14 kDa, Protein from Triticum aestivum)
- Genome assembly, chromosome: ii (12 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l21 (18 kDa, Protein from Triticum aestivum)
- Ribosomal protein l2 c-terminal domain-containing protein (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l37a, expressed (10 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l27 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l13 (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el32 (15 kDa, Protein from Triticum aestivum)
- Ribosomal protein l14e domain-containing protein (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l7a (29 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l11 (20 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l35 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l18a (21 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l31 (14 kDa, Protein from Triticum aestivum)
- 25s rrna (1 MDa, RNA from Triticum aestivum)
- Ribosomal protein l7ae/l30e/s12e/gadd45 domain-containing protein (12 kDa, Protein from Triticum aestivum)
- 5s rrna (38 kDa, RNA from Triticum aestivum)
CryoEM structure of wheat 40S ribosomal subunit, body domain
Resolution: 2.34 Å
EM Method: Single-particle
Fitted PDBs: 8r6f
Q-score: 0.6
Kravchenko OV, Baymukhametov TN, Afonina ZA, Vassilenko KS
Int J Mol Sci (2023) 24 [ Pubmed: 38139282 DOI: doi:10.3390/ijms242417453 ]
- 40s ribosomal protein s8 (25 kDa, Protein from Triticum aestivum)
- Large ribosomal subunit protein el41z/el41y/el41x/el41w/el41v (3 kDa, Protein from Triticum aestivum)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s30 (6 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s6 (28 kDa, Protein from Triticum aestivum)
- Potassium ion (39 Da, Ligand)
- 40s ribosomal protein s4 (30 kDa, Protein from Triticum aestivum)
- Small ribosomal subunit protein es1 (30 kDa, Protein from Triticum aestivum)
- Water (18 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Small ribosomal subunit protein us2 (33 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s24 (15 kDa, Protein from Triticum aestivum)
- Small ribosomal subunit protein us17 n-terminal domain-containing protein (17 kDa, Protein from Triticum aestivum)
- Rna (1177-mer) (584 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein s23 (15 kDa, Protein from Triticum aestivum)
- Small ribosomal subunit protein us15 n-terminal domain-containing protein (17 kDa, Protein from Triticum aestivum)
- Small ribosomal subunit from triticum aestivum (common wheat) (Complex from Triticum aestivum)
- S5 drbm domain-containing protein (30 kDa, Protein from Triticum aestivum)
- 30s ribosomal protein s11, chloroplastic (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s17 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s26 (15 kDa, Protein from Triticum aestivum)
- Genome assembly, chromosome: ii (8 kDa, Protein from Triticum aestivum)
- Small ribosomal subunit protein us8c (14 kDa, Protein from Triticum aestivum)
- 30s ribosomal protein s4, chloroplastic (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s27 (9 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s7 (22 kDa, Protein from Triticum aestivum)