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sample_name:"Glycoprotein E2"
Release date: Dec. 11, 2024
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 8yvy
Q-score: 0.333
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 8yvy
Q-score: 0.333
To Be Published
Sample:
- Spike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus 4)
- Spike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus 4)
- Spike glycoprotein e3 (5 kDa, Protein from Semliki Forest virus 4)
- Semliki forest virus viron (Cellular component from Semliki Forest virus 4)
- Capsid protein (17 kDa, Protein from Semliki Forest virus 4)
Release date: Dec. 11, 2024
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 8yvz
Q-score: 0.305
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 8yvz
Q-score: 0.305
To Be Published
Sample:
- Semliki forest virus viron in complex with vldlr-la3 (Cellular component from Semliki Forest virus 4)
- Calcium ion (40 Da, Ligand)
- Spike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus 4)
- Spike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus 4)
- Spike glycoprotein e3 (5 kDa, Protein from Semliki Forest virus 4)
- Very low-density lipoprotein receptor (4 kDa, Protein from Homo sapiens)
- Capsid protein, partial (17 kDa, Protein from Semliki Forest virus 4)
Release date: Dec. 11, 2024
Resolution: 3.55 Å
EM Method: Single-particle
Fitted PDBs: 8yw0
Q-score: 0.225
Resolution: 3.55 Å
EM Method: Single-particle
Fitted PDBs: 8yw0
Q-score: 0.225
To Be Published
Sample:
- Calcium ion (40 Da, Ligand)
- Spike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus 4)
- Spike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus 4)
- Very low-density lipoprotein receptor (4 kDa, Protein from Homo sapiens)
- Spike glycoprotein e3 (5 kDa, Protein from Semliki Forest virus 4)
- Capsid protein, partial (17 kDa, Protein from Semliki Forest virus 4)
- Semliki forest virus viron in complex with vldlr-la5 (Cellular component from Semliki Forest virus 4)
Semliki Forest virus viron in complex with VLDLR
Release date: Dec. 11, 2024
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8yw1
Q-score: 0.437
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8yw1
Q-score: 0.437
To Be Published
Sample:
- Very low-density lipoprotein receptor (13 kDa, Protein from Homo sapiens)
- Spike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus 4)
- Spike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus 4)
- Semliki forest virus viron in complex with vldlr-la3-5 (Cellular component from Semliki Forest virus 4)
- Spike glycoprotein e3 (5 kDa, Protein from Semliki Forest virus 4)
- Capsid protein, partial (17 kDa, Protein from Semliki Forest virus 4)
Semliki Forest virus viron in complex with VLDLR
Release date: Dec. 11, 2024
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8yw2
Q-score: 0.467
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8yw2
Q-score: 0.467
To Be Published
Sample:
- Spike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus 4)
- Spike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus 4)
- Spike glycoprotein e3 (5 kDa, Protein from Semliki Forest virus 4)
- Capsid protein, partial (17 kDa, Protein from Semliki Forest virus 4)
- Very low-density lipoprotein receptor (17 kDa, Protein from Homo sapiens)
- Semliki forest viron (Complex from Semliki Forest virus 4)
Cryo-EM structure of Semliki Forest virus in complex with its receptor VLDLR(2-fold)
Release date: Nov. 27, 2024
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0k
Q-score: 0.436
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0k
Q-score: 0.436
To Be Published
Sample:
- Spike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Cryo-em structure of semliki forest virus in complex with its receptor vldlr(2-fold) (Complex from Semliki Forest virus)
- Spike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus)
- Very low-density lipoprotein receptor (4 kDa, Protein from Homo sapiens)
- Capsid protein (17 kDa, Protein from Semliki Forest virus)
Cryo-EM structure of Semliki Forest virus in complex with its receptor VLDLR(3-fold)
Release date: Nov. 27, 2024
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0l
Q-score: 0.455
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0l
Q-score: 0.455
To Be Published
Sample:
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Cryo-em structure of semliki forest virus in complex with its receptor vldlr(3-fold) (Complex from Semliki Forest virus)
- Calcium ion (40 Da, Ligand)
- Pike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus)
- Pike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus)
- Very low-density lipoprotein receptor (4 kDa, Protein from Homo sapiens)
- Capsid protein (17 kDa, Protein from Semliki Forest virus)
Cryo-EM structure of Semliki Forest virus in complex with its receptor VLDLR(5-fold)
Release date: Nov. 27, 2024
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0m
Q-score: 0.405
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0m
Q-score: 0.405
To Be Published
Sample:
- Spike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Cryo-em structure of semliki forest virus in complex with its receptor vldlr(5-fold) (Complex from Semliki Forest virus)
- Spike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus)
- Capsid protein (17 kDa, Protein from Semliki Forest virus)
- Very low-density lipoprotein receptor (4 kDa, Protein from Semliki Forest virus)
Release date: Sept. 25, 2024
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8u9y
Q-score: 0.437
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8u9y
Q-score: 0.437
Shahid S, Liqun J, Liu Y, Hasan SS, Mariuzza RA
To Be Published
Sample:
- Hc84.26 light chain (25 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Envelope glycoprotein e2 (32 kDa, Protein from Hepacivirus)
- Hc84.26 heavy chain (27 kDa, Protein from Homo sapiens)
- Hcv e2-hc84.26 complex (340 kDa, Complex from Homo sapiens)
Shahid S, Liqun J, Liu Y, Hasan SS, Mariuzza RA
To Be Published
Sample:
- Hcv e2-cbh-4b complex (240 kDa, Complex from Homo sapiens)
- Cbh4b light chain (25 kDa, Protein from Homo sapiens)
- Cbh4b heavy chain (27 kDa, Protein from Homo sapiens)
- Envelope glycoprotein e2 (32 kDa, Protein from Hepatitis C virus (isolate 1))