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sample_name:"Glycoprotein E2" AND author_name:"S"
Cryo-EM structure of Semliki Forest virus in complex with its receptor VLDLR(2-fold)
Release date: Nov. 27, 2024
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0k
Q-score: 0.436
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0k
Q-score: 0.436
To Be Published
Sample:
- Spike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus)
- Very low-density lipoprotein receptor (4 kDa, Protein from Homo sapiens)
- Spike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus)
- Cryo-em structure of semliki forest virus in complex with its receptor vldlr(2-fold) (Complex from Semliki Forest virus)
- Calcium ion (40 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Capsid protein (17 kDa, Protein from Semliki Forest virus)
Cryo-EM structure of Semliki Forest virus in complex with its receptor VLDLR(3-fold)
Release date: Nov. 27, 2024
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0l
Q-score: 0.455
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0l
Q-score: 0.455
To Be Published
Sample:
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Very low-density lipoprotein receptor (4 kDa, Protein from Homo sapiens)
- Pike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus)
- Cryo-em structure of semliki forest virus in complex with its receptor vldlr(3-fold) (Complex from Semliki Forest virus)
- Calcium ion (40 Da, Ligand)
- Pike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus)
- Capsid protein (17 kDa, Protein from Semliki Forest virus)
Cryo-EM structure of Semliki Forest virus in complex with its receptor VLDLR(5-fold)
Release date: Nov. 27, 2024
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0m
Q-score: 0.405
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0m
Q-score: 0.405
To Be Published
Sample:
- Cryo-em structure of semliki forest virus in complex with its receptor vldlr(5-fold) (Complex from Semliki Forest virus)
- Spike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus)
- Spike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus)
- Very low-density lipoprotein receptor (4 kDa, Protein from Semliki Forest virus)
- Calcium ion (40 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Capsid protein (17 kDa, Protein from Semliki Forest virus)
Release date: Sept. 25, 2024
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8u9y
Q-score: 0.437
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8u9y
Q-score: 0.437
Shahid S, Liqun J, Liu Y, Hasan SS, Mariuzza RA
To Be Published
Sample:
- Hc84.26 light chain (25 kDa, Protein from Homo sapiens)
- Envelope glycoprotein e2 (32 kDa, Protein from Hepacivirus)
- Hcv e2-hc84.26 complex (340 kDa, Complex from Homo sapiens)
- Hc84.26 heavy chain (27 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Shahid S, Liqun J, Liu Y, Hasan SS, Mariuzza RA
To Be Published
Sample:
- Envelope glycoprotein e2 (32 kDa, Protein from Hepatitis C virus (isolate 1))
- Cbh4b light chain (25 kDa, Protein from Homo sapiens)
- Cbh4b heavy chain (27 kDa, Protein from Homo sapiens)
- Hcv e2-cbh-4b complex (240 kDa, Complex from Homo sapiens)
Shahid S, Liqun J, Liu Y, Hasan SS, Mariuzza RA
To Be Published
Sample:
- Cbh-4b light chain (25 kDa, Protein from Homo sapiens)
- Envelope glycoprotein e2 (32 kDa, Protein from Hepatitis C virus (isolate 1))
- Cbh-4b heavy chain (27 kDa, Protein from Homo sapiens)
- Hcv e2-cbh-4b complex (240 kDa, Complex from Homo sapiens)
CryoEM structure of Fab HC84.26-HCV E2 complex
Release date: July 24, 2024
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 8tgv
Q-score: 0.425
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 8tgv
Q-score: 0.425
Shahid S, Liqun J, LIu Y, Hasan SS, Mariuzza RA
To Be Published
Sample:
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hcv e2-hc84.26 complex (340 kDa, Complex from Homo sapiens)
- Envelope glycoprotein e2 (32 kDa, Protein from Hepacivirus C)
- Hc84.26 heavy chain (27 kDa, Protein from Homo sapiens)
- Hc84.26 light chain (25 kDa, Protein from Homo sapiens)
Release date: July 24, 2024
Resolution: 3.78 Å
EM Method: Single-particle
Fitted PDBs: 8tgz
Q-score: 0.455
Resolution: 3.78 Å
EM Method: Single-particle
Fitted PDBs: 8tgz
Q-score: 0.455
Shahid S, Liqun J, LIu Y, Hasan SS, Mariuzza RA
To Be Published
Sample:
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hcv e2-hc84.26 complex (340 kDa, Complex from Homo sapiens)
- Envelope glycoprotein e2 (32 kDa, Protein from Hepacivirus C)
- Hc84.26 heavy chain (27 kDa, Protein from Homo sapiens)
- Hc84.26 light chain (25 kDa, Protein from Homo sapiens)
Release date: July 24, 2024
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 8thz
Q-score: 0.482
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 8thz
Q-score: 0.482
Shahid S, Jiang L, Liu Y, Hasan SS, Mariuzza RA
To Be Published
Sample:
- Hc84.26 heavy chain (28 kDa, Protein from Homo sapiens)
- Ternary complex of cbh7-e2-hc84.26 (340 kDa, Complex from Homo sapiens)
- Cbh-7 heavy chain (27 kDa, Protein from Homo sapiens)
- Envelope glycoprotein e2 (32 kDa, Protein from Hepacivirus C)
- Cbh-7 light chain (25 kDa, Protein from Homo sapiens)
- Hc84.26 light chain (25 kDa, Protein from Homo sapiens)
CryoEM structure of Western equine encephalitis virus VLP in complex with the avian MXRA8 receptor
Release date: Oct. 25, 2023
Resolution: 3.92 Å
EM Method: Single-particle
Fitted PDBs: 8ewf
Q-score: 0.321
Resolution: 3.92 Å
EM Method: Single-particle
Fitted PDBs: 8ewf
Q-score: 0.321
Zimmerman O, Zimmerman MI, Nelson CA, Raju S, Errico JM, Madden EA, Hassan AO, VanBlargan LA, Kim AS, Adams LJ, Basore K, Whitener BM, Earnest JT, Holmes AC, Ebel GD, Zmasek C, Scheuermann RH, Fremont DH, Diamond MS
To Be Published
Sample:
- Chimeric mxra8 receptor: d1 from duck mxra8 and d2 from mouse mxra8 (30 kDa, Protein from Anas platyrhynchos)
- E1 envelope protein (47 kDa, Protein from Chikungunya virus)
- Spike glycoprotein e2 (46 kDa, Protein from Chikungunya virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Chikungunya virus vlp in complex with a chimeric mxra8 receptor (avian d1 with mammalian d2) (495 MDa, Complex from Chikungunya virus)