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sample_name:"HIstone" AND xref_links:"pdb" AND microscope_name:"TFS TALOS"
Structure of a native Drosophila melanogaster octameric nucleosome
Release date: Feb. 19, 2025
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 9mu4
Q-score: 0.442
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 9mu4
Q-score: 0.442
Venette-Smith NL, Vishwakarma RK, Dollinger R, Schultz J, Venkatakrishnan V, Babitzke P, Anand G, Gilmour DS, Armache J-P, Murakami K
To Be Published
Sample:
- Dna (164-mer) (50 kDa, DNA from Drosophila melanogaster)
- Histone h2a (11 kDa, Protein from Drosophila melanogaster)
- Histone h4 (9 kDa, Protein from Drosophila melanogaster)
- Histone h3 (11 kDa, Protein from Drosophila melanogaster)
- Dna (164-mer) (50 kDa, DNA from Drosophila melanogaster)
- Histone h2b (10 kDa, Protein from Drosophila melanogaster)
- Natively purified octameric nucleosome from drosophila melanogaster (240 MDa, Complex from Drosophila melanogaster)
Structure of a native Drosophila melanogaster hexameric nucleosome
Release date: Feb. 19, 2025
Resolution: 6.3 Å
EM Method: Single-particle
Fitted PDBs: 9mu5
Q-score: 0.206
Resolution: 6.3 Å
EM Method: Single-particle
Fitted PDBs: 9mu5
Q-score: 0.206
Venette-Smith NL, Vishwakarma RK, Dollinger R, Schultz J, Venkatakrishnan V, Babitzke P, Anand G, Gilmour DS, Armache J-P, Murakami K
To Be Published
Sample:
- Natively purified hexameric nucleosome from drosophila melanogaster (220 MDa, Complex from Drosophila melanogaster)
- Dna (133-mer) (41 kDa, DNA from Drosophila melanogaster)
- Histone h4 (9 kDa, Protein from Drosophila melanogaster)
- Histone h2b (10 kDa, Protein from Drosophila melanogaster)
- Histone h3 (10 kDa, Protein from Drosophila melanogaster)
- Dna (133-mer) (40 kDa, DNA from Drosophila melanogaster)
- Histone h2a (11 kDa, Protein from Drosophila melanogaster)
Release date: Feb. 19, 2025
Resolution: 7.8 Å
EM Method: Single-particle
Fitted PDBs: 9mu9
Q-score: 0.202
Resolution: 7.8 Å
EM Method: Single-particle
Fitted PDBs: 9mu9
Q-score: 0.202
Venette-Smith NL, Vishwakarma RK, Dollinger R, Schultz J, Venkatakrishnan V, Babitzke P, Anand G, Gilmour DS, Armache J-P, Murakami K
To Be Published
Sample:
- Non-template dna (50 kDa, DNA from Drosophila melanogaster)
- Rna (3 kDa, RNA from Drosophila melanogaster)
- Template dna (53 kDa, DNA from Drosophila melanogaster)
- Histone h3 (11 kDa, Protein from Drosophila melanogaster)
- Histone h4 (9 kDa, Protein from Drosophila melanogaster)
- Dna-directed rna polymerase ii subunit rpb11 (13 kDa, Protein from Drosophila melanogaster)
- Dna-directed rna polymerase ii subunit rpb5 (24 kDa, Protein from Drosophila melanogaster)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc2 (9 kDa, Protein from Drosophila melanogaster)
- Dna-directed rna polymerase ii subunit rpb3 (30 kDa, Protein from Drosophila melanogaster)
- Zinc ion (65 Da, Ligand)
- Histone h2b (10 kDa, Protein from Drosophila melanogaster)
- Dna-directed rna polymerase ii subunit rpb12 (5 kDa, Protein from Drosophila melanogaster)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (16 kDa, Protein from Drosophila melanogaster)
- Native purified nucleosome elongation complex from drosophila melanogaster (750 kDa, Complex from Drosophila melanogaster)
- Histone h2a (11 kDa, Protein from Drosophila melanogaster)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (7 kDa, Protein from Drosophila melanogaster)
- Dna-directed rna polymerase ii subunit rpb2 (132 kDa, Protein from Drosophila melanogaster)
- Dna-directed rna polymerase ii subunit rpb1 (166 kDa, Protein from Drosophila melanogaster)
- Dna-directed rna polymerase ii subunit rpb9 (13 kDa, Protein from Drosophila melanogaster)