Structure of CD163 in complex with Hb-Hp
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 8xmp
Q-score: 0.488
To Be Published
- Isoform 2 of haptoglobin (38 kDa, Protein from Homo sapiens)
- Hemoglobin subunit beta (16 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Cd163 in complex with hb-hp (Complex from Homo sapiens)
- Hemoglobin subunit alpha (15 kDa, Protein from Homo sapiens)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Scavenger receptor cysteine-rich type 1 protein m130 (109 kDa, Protein from Homo sapiens)
Structure of dimeric CD163 in complex with Hb-Hp
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 8xmq
Q-score: 0.462
To Be Published
- Isoform 2 of haptoglobin (38 kDa, Protein from Homo sapiens)
- Dimeric cd163 in complex with hb-hp (Complex from Homo sapiens)
- Hemoglobin subunit beta (16 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Hemoglobin subunit alpha (15 kDa, Protein from Homo sapiens)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Scavenger receptor cysteine-rich type 1 protein m130 (109 kDa, Protein from Homo sapiens)
Local refinement of Hb-Hp bind to CD163
Resolution: 2.94 Å
EM Method: Single-particle
Fitted PDBs: 8xmw
Q-score: 0.552
To Be Published
- Isoform 2 of haptoglobin (38 kDa, Protein from Homo sapiens)
- Hemoglobin subunit beta (16 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Cd163 in complex with hb-hp (Complex from Homo sapiens)
- Hemoglobin subunit alpha (15 kDa, Protein from Homo sapiens)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Scavenger receptor cysteine-rich type 1 protein m130 (109 kDa, Protein from Homo sapiens)
REEL analysis reconstructions of lumbricus terrestris erythrocruorin (worm hemoglobin)
Pfeil-Gardiner O, Rosa HVD, Riedel D, Chen YS, Lorks D, Kukelhan P, Linck M, Muller H, Van Petegem F, Murphy BJ
Nat Methods (2024) 21 pp. 2299-2306 [ DOI: doi:10.1038/s41592-024-02482-5 Pubmed: 39448878 ]
cryo-EM structure of hemoglobin
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7xgy
Q-score: 0.407
Zheng L, Liu N, Gao X, Zhu W, Liu K, Wu C, Yan R, Zhang J, Gao X, Yao Y, Deng B, Xu J, Lu Y, Liu Z, Li M, Wei X, Wang HW, Peng H
Nat Methods (2023) 20 pp. 123-130 [ DOI: doi:10.1038/s41592-022-01693-y Pubmed: 36522503 ]
- Hemoglobin subunit alpha (15 kDa, Protein from Homo sapiens)
- Hemoglobin subunit beta (16 kDa, Protein from Homo sapiens)
- Hemoglobin (Complex from Homo sapiens)
- Protoporphyrin ix containing fe (616 Da, Ligand)
3.6 A structure of the human hemoglobin
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7vde
Q-score: 0.448
Fan H, Wang B, Zhang Y, Zhu Y, Song B, Xu H, Zhai Y, Qiao M, Sun F
Nat Commun (2021) 12 pp. 7257-7257 [ DOI: doi:10.1038/s41467-021-27596-8 Pubmed: 34907237 ]
- Hemoglobin subunit alpha (15 kDa, Protein from Homo sapiens)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Hemoglobin subunit beta (16 kDa, Protein from Homo sapiens)
- Human hemoglobin (64 kDa, Complex from Homo sapiens)