Class1 of the INO80-Hexasome complex
Resolution: 6.68 Å
EM Method: Single-particle
Fitted PDBs: 8ett
Q-score: 0.186
Wu H, Munoz EN, Hsieh LJ, Chio US, Gourdet MA, Narlikar GJ, Cheng Y
Science (2023) 381 pp. 319-324 [ Pubmed: 37384669 DOI: doi:10.1126/science.adf4197 ]
- Histone h2a type 1 (14 kDa, Protein from Xenopus laevis)
- Histone h3.2 (15 kDa, Protein from Xenopus laevis)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- Class1 hexasome in ino80-hexasome complex (Complex from Xenopus laevis)
- Dna (110-mer) (69 kDa, DNA from synthetic construct)
- Dna (110-mer) (70 kDa, DNA from synthetic construct)
Class2 of the INO80-Hexasome complex
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 8etv
Q-score: 0.387
Wu H, Munoz EN, Hsieh LJ, Chio US, Gourdet MA, Narlikar GJ, Cheng Y
Science (2023) 381 pp. 319-324 [ Pubmed: 37384669 DOI: doi:10.1126/science.adf4197 ]
- Class2 hexasome in ino80-hexasome complex (Complex from Xenopus laevis)
- Histone h2a type 1 (14 kDa, Protein from Xenopus laevis)
- Histone h3.2 (15 kDa, Protein from Xenopus laevis)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- Dna (110-mer) (69 kDa, DNA from synthetic construct)
- Dna (110-mer) (70 kDa, DNA from synthetic construct)
Class3 of the INO80-Hexasome complex
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 8eu2
Q-score: 0.434
Wu H, Munoz EN, Hsieh LJ, Chio US, Gourdet MA, Narlikar GJ, Cheng Y
Science (2023) 381 pp. 319-324 [ Pubmed: 37384669 DOI: doi:10.1126/science.adf4197 ]
- Histone h2a type 1 (14 kDa, Protein from Xenopus laevis)
- Ino80-hex (Complex from Xenopus laevis)
- Dna (110-mer) (69 kDa, DNA from synthetic construct)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Histone h3.2 (15 kDa, Protein from Xenopus laevis)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- Dna (110-mer) (70 kDa, DNA from synthetic construct)
Class1 of the INO80-Nucleosome complex
Resolution: 3.48 Å
EM Method: Single-particle
Fitted PDBs: 8eue
Q-score: 0.356
Wu H, Munoz EN, Hsieh LJ, Chio US, Gourdet MA, Narlikar GJ, Cheng Y
Science (2023) 381 pp. 319-324 [ Pubmed: 37384669 DOI: doi:10.1126/science.adf4197 ]
- Histone h4 (11 kDa, Protein from Xenopus)
- Dna (147-mer) (69 kDa, DNA from synthetic construct)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus)
- Dna (147-mer) (70 kDa, DNA from synthetic construct)
- Histone h2a type 1 (14 kDa, Protein from Xenopus)
- Histone h3.2 (15 kDa, Protein from Xenopus)
- Class1 nucleosome of the ino80-nucleosome complex (Complex from Xenopus)
Class2 of the INO80-Nucleosome complex
Resolution: 3.36 Å
EM Method: Single-particle
Fitted PDBs: 8euj
Q-score: 0.322
Wu H, Munoz EN, Hsieh LJ, Chio US, Gourdet MA, Narlikar GJ, Cheng Y
Science (2023) 381 pp. 319-324 [ Pubmed: 37384669 DOI: doi:10.1126/science.adf4197 ]
- Histone h4 (11 kDa, Protein from Xenopus)
- Dna (147-mer) (69 kDa, DNA from synthetic construct)
- Class2 nucleosome of the ino80-nucleosome complex (Complex from Xenopus)
- Dna (147-mer) (70 kDa, DNA from synthetic construct)
- Histone h2a type 1 (14 kDa, Protein from Xenopus)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus)
- Histone h3.2 (15 kDa, Protein from Xenopus)
The crosslinked complex of ISWI-nucleosome in the ADP.BeF-bound state
Resolution: 3.37 Å
EM Method: Single-particle
Fitted PDBs: 6jyl
Q-score: 0.452
Yan L, Wu H, Li X, Gao N, Chen Z
Nat Struct Mol Biol (2019) 26 pp. 258-266 [ DOI: doi:10.1038/s41594-019-0199-9 Pubmed: 30872815 ]
- Iswi (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Nucleosome (Complex from Xenopus laevis)
- Histone h3 (15 kDa, Protein from Xenopus laevis)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Histone h2a (13 kDa, Protein from Xenopus laevis)
- Beryllium trifluoride ion (66 Da, Ligand)
- Dna (167-mer) (51 kDa, DNA from Escherichia coli K-12)
- Dna (Complex from Escherichia coli K-12)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- Iswi-nucleosome-crosslinked (300 kDa, Complex)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Dna (167-mer) (51 kDa, Protein from Escherichia coli K-12)
- Iswi chromatin-remodeling complex atpase isw1 (123 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
The complex of ISWI-nucleosome in the ADP.BeF-bound state
Resolution: 3.87 Å
EM Method: Single-particle
Fitted PDBs: 6k1p
Q-score: 0.42
Yan L, Wu H, Li X, Gao N, Chen Z
Nat Struct Mol Biol (2019) 26 pp. 258-266 [ DOI: doi:10.1038/s41594-019-0199-9 Pubmed: 30872815 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Histone h3 (15 kDa, Protein from Xenopus laevis)
- Nuleosome (Complex from Xenopus laevis)
- Histone h2a (13 kDa, Protein from Xenopus laevis)
- Beryllium trifluoride ion (66 Da, Ligand)
- Dna (167-mer) (51 kDa, DNA from Escherichia coli K-12)
- Dna (Complex from Escherichia coli K-12)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Dna (167-mer) (51 kDa, DNA from Escherichia coli K-12)
- Isw1 (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- The complex of iswi-nucleosome in the adp-bef-bound state (300 kDa, Complex)
- Iswi chromatin-remodeling complex atpase isw1 (123 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
the crosslinked complex of ISWI-nucleosome in the ADP-bound state
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6iro
Q-score: 0.435
Yan L, Wu H, Li X, Gao N, Chen Z
Nat Struct Mol Biol (2019) 26 pp. 258-266 [ DOI: doi:10.1038/s41594-019-0199-9 Pubmed: 30872815 ]
- Histone octamer (Complex from Xenopus laevis)
- The crosslinked complex of iswi-nucleosome in the adp-bound state (Complex)
- Histone h3 (15 kDa, Protein from Xenopus laevis)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Dna (Complex from Escherichia coli K-12)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- Histone h2a (13 kDa, Protein from Xenopus laevis)
- Isw1 (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna (167-mer) (51 kDa, DNA from Escherichia coli K-12)
- Iswi chromatin-remodeling complex atpase isw1 (123 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna (167-mer) (51 kDa, DNA from Escherichia coli K-12)