Mayanagi K, Saikusa K, Miyazaki N, Akashi S, Iwasaki K, Nishimura Y, Morikawa K, Tsunaka Y
Sci Rep (2019) 9 pp. 10183-10183 [ DOI: doi:10.1038/s41598-019-46617-7 Pubmed: 31308435 ]
- Histone h2b (Complex from Homo sapiens)
- 112bp 601 dna (Complex from Homo sapiens)
- Histone h4 (Complex from Homo sapiens)
- Histone h3.1 (Complex from Homo sapiens)
- 112-bp octasome/paid (200 kDa, Complex from Homo sapiens)
- Histone h2a (Complex from Homo sapiens)
- Mid-paid (Complex from Homo sapiens)
Mayanagi K, Saikusa K, Miyazaki N, Akashi S, Iwasaki K, Nishimura Y, Morikawa K, Tsunaka Y
Sci Rep (2019) 9 pp. 10183-10183 [ DOI: doi:10.1038/s41598-019-46617-7 Pubmed: 31308435 ]
- Histone h2b (Complex from Homo sapiens)
- 112-bp octasome/dna complex (200 kDa, Complex from Homo sapiens)
- 112bp 601 dna (Complex from Homo sapiens)
- Histone h4 (Complex from Homo sapiens)
- Histone h3.1 (Complex from Homo sapiens)
- Histone h2a (Complex from Homo sapiens)
112-bp octasome/Mid-pAID complex
Mayanagi K, Saikusa K, Miyazaki N, Akashi S, Iwasaki K, Nishimura Y, Morikawa K, Tsunaka Y
Sci Rep (2019) 9 pp. 10183-10183 [ DOI: doi:10.1038/s41598-019-46617-7 Pubmed: 31308435 ]
- Histone h2b (Complex from Homo sapiens)
- 112bp 601 dna (Complex from Homo sapiens)
- Histone h4 (Complex from Homo sapiens)
- Histone h3.1 (Complex from Homo sapiens)
- 112-bp octasome/mid-paid (200 kDa, Complex from Homo sapiens)
- Histone h2a (Complex from Homo sapiens)
- Mid-paid (Complex from Homo sapiens)
Mayanagi K, Saikusa K, Miyazaki N, Akashi S, Iwasaki K, Nishimura Y, Morikawa K, Tsunaka Y
To Be Published
- Histone h2b (Complex from Homo sapiens)
- 112bp 601 dna (Complex from Homo sapiens)
- Histone h4 (Complex from Homo sapiens)
- Histone h3.1 (Complex from Homo sapiens)
- 112-bp octasome/paid (200 kDa, Complex from Homo sapiens)
- Histone h2a (Complex from Homo sapiens)
- Mid-paid (Complex from Homo sapiens)
Mayanagi K, Saikusa K, Miyazaki N, Akashi S, Iwasaki K, Nishimura Y, Morikawa K, Tsunaka Y
Sci Rep (2019) 9 pp. 10183-10183 [ DOI: doi:10.1038/s41598-019-46617-7 Pubmed: 31308435 ]
- Histone h2b (Complex from Homo sapiens)
- 112bp 601 dna (Complex from Homo sapiens)
- Histone h4 (Complex from Homo sapiens)
- Histone h3.1 (Complex from Homo sapiens)
- 112-bp hexasome (200 kDa, Complex from Homo sapiens)
- Histone h2a (Complex from Homo sapiens)
cryo-EM structure of DOT1L bound to unmodified nucleosome
Resolution: 7.3 Å
EM Method: Single-particle
Fitted PDBs: 6jm9
Q-score: 0.132
Jang S, Kang C, Yang HS, Jung T, Hebert H, Chung KY, Kim SJ, Hohng S, Song JJ
Genes Dev (2019) 33 pp. 620-625 [ DOI: doi:10.1101/gad.323790.118 Pubmed: 30923167 ]
- Dna strand j (38 kDa, DNA from synthetic construct)
- S-adenosylmethionine (398 Da, Ligand)
- Dna strand i (37 kDa, DNA from synthetic construct)
- Histone h2a (11 kDa, Protein from Xenopus laevis)
- Histone h4 (9 kDa, Protein from Xenopus laevis)
- Histone-lysine n-methyltransferase, h3 lysine-79 specific (37 kDa, Protein from Homo sapiens)
- Dot1l bound to unmodified nucleosome (270 kDa, Complex from Xenopus laevis)
- Histone h2b 1.1 (10 kDa, Protein from Xenopus laevis)
- Histone h3.2 (11 kDa, Protein from Xenopus laevis)
cryo-EM structure of DOT1L bound to H2B ubiquitinated nucleosome
Resolution: 6.8 Å
EM Method: Single-particle
Fitted PDBs: 6jma
Q-score: 0.144
Jang S, Kang C, Yang HS, Jung T, Hebert H, Chung KY, Kim SJ, Hohng S, Song JJ
Genes Dev (2019) 33 pp. 620-625 [ DOI: doi:10.1101/gad.323790.118 Pubmed: 30923167 ]
- S-adenosylmethionine (398 Da, Ligand)
- Ubiquitin (8 kDa, Protein from Homo sapiens)
- Dot1l bound to h2b ubiquitinated nucleosome (290 kDa, Complex from Xenopus laevis)
- Dna i&j (35 kDa, DNA from synthetic construct)
- Histone h4 (9 kDa, Protein from Xenopus laevis)
- Histone-lysine n-methyltransferase, h3 lysine-79 specific (37 kDa, Protein from Homo sapiens)
- Histone h2a (12 kDa, Protein from Xenopus laevis)
- Histone h2b 1.1 (10 kDa, Protein from Xenopus laevis)
- Histone h3.2 (11 kDa, Protein from Xenopus laevis)